CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp7 : CodonNum = 67

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp767D67DD3926DsyngaCgaT31663166112041-12043
ORF1ab/nsp767D67YD3926YnonsynGacTac1521510.99342112041-12043
ORF1ab/nsp767D67YD3926YnonsynGaCTaT15210.0065789512041-12043
ORF1ab/nsp767D67GD3926GnonsyngAcgGc40370.92512041-12043
ORF1ab/nsp767D67GD3926GnonsyngACgGT4030.07512041-12043
ORF1ab/nsp767D67delD3926deldelGAC---2828112041-12043
ORF1ab/nsp767D67ND3926NnonsynGacAac2424112041-12043
ORF1ab/nsp767D67AD3926AnonsyngAcgCc1515112041-12043
ORF1ab/nsp767D67HD3926HnonsynGacCac88112041-12043
ORF1ab/nsp767D67ED3926EnonsyngaCgaA430.7512041-12043
ORF1ab/nsp767D67VD3926VnonsyngACgTT420.512041-12043
ORF1ab/nsp767D67VD3926VnonsyngAcgTc420.512041-12043
ORF1ab/nsp767D67ED3926EnonsyngaCgaG410.2512041-12043
ORF1ab/nsp767D67SD3926SnonsynGAcAGc33112041-12043
ORF1ab/nsp767D67KD3926KnonsynGaCAaG33112041-12043
ORF1ab/nsp767D67del1D3926del1delgACg-T11112041-12043

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp767D67DgaCgaT31663166All0.000606
ORF1ab/nsp767D67DgaCgaT832832B.1.36.10.948689
ORF1ab/nsp767D67DgaCgaT497497B.1.1.70.000445
ORF1ab/nsp767D67DgaCgaT242242B.1.1490.828767
ORF1ab/nsp767D67YGacTac151152All0.000029
ORF1ab/nsp767D67YGaCTaT1152All0
ORF1ab/nsp767D67DgaCgaT143143AY.40.000223
ORF1ab/nsp767D67DgaCgaT133133AY.4.50.014296
ORF1ab/nsp767D67DgaCgaT8686B.1.617.20.000324
ORF1ab/nsp767D67DgaCgaT8080P.10.00126
ORF1ab/nsp767D67DgaCgaT7979AK.11
ORF1ab/nsp767D67DgaCgaT5959B.10.00054
ORF1ab/nsp767D67DgaCgaT5757B.1.10.001034
ORF1ab/nsp767D67DgaCgaT5353AY.430.000235
ORF1ab/nsp767D67DgaCgaT5050AY.930.013654
ORF1ab/nsp767D67DgaCgaT4848B.1.2210.00341
ORF1ab/nsp767D67DgaCgaT4444AY.200.00171
ORF1ab/nsp767D67GgAcgGc3740All0.000007
ORF1ab/nsp767D67GgACgGT340All0.000001
ORF1ab/nsp767D67DgaCgaT3535B.1.20.000308
ORF1ab/nsp767D67DgaCgaT3333AY.30.000328
ORF1ab/nsp767D67DgaCgaT3333AY.440.000201
ORF1ab/nsp767D67DgaCgaT3232AY.250.000192
ORF1ab/nsp767D67YGacTac3232AY.40.00005
ORF1ab/nsp767D67DgaCgaT3131AY.1030.000192
ORF1ab/nsp767D67YGacTac3131D.20.002326
ORF1ab/nsp767D67DgaCgaT2929B.1.1770.000382
ORF1ab/nsp767D67DgaCgaT2929B.1.617.10.00374
ORF1ab/nsp767D67delGAC---2828All0.000005
ORF1ab/nsp767D67DgaCgaT2828B.1.1.1590.130841
ORF1ab/nsp767D67GgAcgGc2828B.1.1.70.000025
ORF1ab/nsp767D67NGacAac2424All0.000005
ORF1ab/nsp767D67YGacTac2424B.1.1.70.000021
ORF1ab/nsp767D67DgaCgaT2424B.1.1600.000749
ORF1ab/nsp767D67YGacTac2323AY.4.50.002472
ORF1ab/nsp767D67DgaCgaT1818AY.390.000445
ORF1ab/nsp767D67DgaCgaT1818B.1.258.170.001871
ORF1ab/nsp767D67DgaCgaT1818B.1.5260.000423
ORF1ab/nsp767D67DgaCgaT1717B.1.177.810.003218
ORF1ab/nsp767D67DgaCgaT1616B.1.4290.000376
ORF1ab/nsp767D67AgAcgCc1515All0.000003
ORF1ab/nsp767D67DgaCgaT1515AY.1020.000398
ORF1ab/nsp767D67NGacAac1414B.1.1.70.000013
ORF1ab/nsp767D67DgaCgaT1414B.1.4970.004407
ORF1ab/nsp767D67DgaCgaT1313AY.60.000535
ORF1ab/nsp767D67DgaCgaT1313B.1.2580.000865
ORF1ab/nsp767D67DgaCgaT1313B.1.3510.000386
ORF1ab/nsp767D67DgaCgaT1313B.1.5610.005161
ORF1ab/nsp767D67DgaCgaT1212AY.50.000248
ORF1ab/nsp767D67DgaCgaT1111B.1.4270.000555
ORF1ab/nsp767D67DgaCgaT1111B.1.6190.009582
ORF1ab/nsp767D67DgaCgaT1010AY.1170.000845
ORF1ab/nsp767D67DgaCgaT1010B.1.214.30.071429
ORF1ab/nsp767D67delGAC---99B.1.1.70.000008
ORF1ab/nsp767D67HGacCac88All0.000002
ORF1ab/nsp767D67DgaCgaT88AY.120.10.002568
ORF1ab/nsp767D67DgaCgaT88B.1.177.860.001468
ORF1ab/nsp767D67DgaCgaT88B.1.214.20.004796
ORF1ab/nsp767D67DgaCgaT88B.1.2430.000557
ORF1ab/nsp767D67DgaCgaT77AY.290.00011
ORF1ab/nsp767D67DgaCgaT77B.1.466.20.002739
ORF1ab/nsp767D67DgaCgaT77P.30.011164
ORF1ab/nsp767D67AgAcgCc66B.1.1.70.000005
ORF1ab/nsp767D67DgaCgaT55AY.4.20.000108
ORF1ab/nsp767D67YGacTac55AY.90.000338
ORF1ab/nsp767D67DgaCgaT55B.1.1.3160.004625
ORF1ab/nsp767D67DgaCgaT55B.1.1.5190.000199
ORF1ab/nsp767D67delGAC---55B.1.1600.000156
ORF1ab/nsp767D67DgaCgaT55C.370.00058
ORF1ab/nsp767D67EgaCgaA34All0.000001
ORF1ab/nsp767D67VgACgTT24All0
ORF1ab/nsp767D67VgAcgTc24All0
ORF1ab/nsp767D67EgaCgaG14All0
ORF1ab/nsp767D67DgaCgaT44AY.750.000224
ORF1ab/nsp767D67YGacTac44AY.80.002424
ORF1ab/nsp767D67DgaCgaT44AY.98.10.000194
ORF1ab/nsp767D67DgaCgaT44B.1.1.280.001245
ORF1ab/nsp767D67DgaCgaT44B.1.177.210.000306
ORF1ab/nsp767D67DgaCgaT44B.1.360.000584
ORF1ab/nsp767D67DgaCgaT44B.1.6210.000354
ORF1ab/nsp767D67DgaCgaT44B.1.6370.000292
ORF1ab/nsp767D67DgaCgaT44D.20.0003
ORF1ab/nsp767D67GgACgGT230.111111
ORF1ab/nsp767D67GgAcgGc130.055556
ORF1ab/nsp767D67DgaCgaT33A.23.10.002113
ORF1ab/nsp767D67KGaCAaG33All0.000001
ORF1ab/nsp767D67SGAcAGc33All0.000001
ORF1ab/nsp767D67DgaCgaT33AU.20.007264
ORF1ab/nsp767D67DgaCgaT33AY.230.000209
ORF1ab/nsp767D67DgaCgaT33AY.460.000312
ORF1ab/nsp767D67DgaCgaT33AY.490.009585
ORF1ab/nsp767D67YGacTac33B.10.000027
ORF1ab/nsp767D67EgaCgaA33B.10.000027
ORF1ab/nsp767D67YGacTac23B.1.10.000036
ORF1ab/nsp767D67YGaCTaT13B.1.10.000018
ORF1ab/nsp767D67DgaCgaT33B.1.1.1700.003741
ORF1ab/nsp767D67delGAC---33B.1.177.600.000655
ORF1ab/nsp767D67DgaCgaT33B.1.3690.000856
ORF1ab/nsp767D67DgaCgaT33B.1.595.40.021898
ORF1ab/nsp767D67DgaCgaT33C.36.30.001702
ORF1ab/nsp767D67DgaCgaT33Q.20.00184
ORF1ab/nsp767D67KGaCAaG220.111111
ORF1ab/nsp767D67NGacAac220.111111
ORF1ab/nsp767D67delGAC---220.111111
ORF1ab/nsp767D67VgACgTT220.111111
ORF1ab/nsp767D67DgaCgaT22A0.000774
ORF1ab/nsp767D67DgaCgaT22AY.1190.000071
ORF1ab/nsp767D67YGacTac22AY.1200.000074
ORF1ab/nsp767D67AgAcgCc22AY.130.000322
ORF1ab/nsp767D67DgaCgaT22AY.270.000129
ORF1ab/nsp767D67DgaCgaT22AY.330.000134
ORF1ab/nsp767D67DgaCgaT22AY.360.000296
ORF1ab/nsp767D67DgaCgaT22AY.39.10.000079
ORF1ab/nsp767D67DgaCgaT22AY.420.00008
ORF1ab/nsp767D67AgAcgCc22AY.430.000009
ORF1ab/nsp767D67YGacTac22AY.440.000012
ORF1ab/nsp767D67DgaCgaT22AY.46.50.000397
ORF1ab/nsp767D67YGacTac22AY.580.001815
ORF1ab/nsp767D67DgaCgaT22AY.99.20.000184
ORF1ab/nsp767D67NGacAac22B.1.10.000036
ORF1ab/nsp767D67DgaCgaT22B.1.1.2140.000111
ORF1ab/nsp767D67DgaCgaT22B.1.1.2910.001485
ORF1ab/nsp767D67DgaCgaT22B.1.1.3060.000877
ORF1ab/nsp767D67DgaCgaT22B.1.1.3180.000604
ORF1ab/nsp767D67DgaCgaT22B.1.1.4640.002946
ORF1ab/nsp767D67HGacCac22B.1.1.70.000002
ORF1ab/nsp767D67YGacTac22B.1.1770.000026
ORF1ab/nsp767D67AgAcgCc22B.1.177.240.002591
ORF1ab/nsp767D67DgaCgaT22B.1.177.50.002484
ORF1ab/nsp767D67DgaCgaT22B.1.177.730.001133
ORF1ab/nsp767D67DgaCgaT22B.1.390.007812
ORF1ab/nsp767D67DgaCgaT22B.1.5170.000854
ORF1ab/nsp767D67delGAC---22B.1.5250.000226
ORF1ab/nsp767D67DgaCgaT22B.1.5250.000226
ORF1ab/nsp767D67DgaCgaT22B.1.5960.000174
ORF1ab/nsp767D67DgaCgaT22B.1.6090.000959
ORF1ab/nsp767D67DgaCgaT22B.1.6280.000705
ORF1ab/nsp767D67DgaCgaT22P.1.140.000096
ORF1ab/nsp767D67DgaCgaT22P.1.150.000465
ORF1ab/nsp767D67YGacTac22P.1.150.000465
ORF1ab/nsp767D67DgaCgaT22P.20.000373
ORF1ab/nsp767D67GgAcgGc22Q.10.000253
ORF1ab/nsp767D67YGacTac110.055556
ORF1ab/nsp767D67SGAcAGc110.055556
ORF1ab/nsp767D67AgAcgCc11A0.000387
ORF1ab/nsp767D67HGacCac11A0.000387
ORF1ab/nsp767D67DgaCgaT11A.2.5.20.001572
ORF1ab/nsp767D67NGacAac11A.23.10.000704
ORF1ab/nsp767D67DgaCgaT11A.270.001656
ORF1ab/nsp767D67del1gACg-T11All0
ORF1ab/nsp767D67DgaCgaT11AY.1000.000046
ORF1ab/nsp767D67DgaCgaT11AY.1070.000466
ORF1ab/nsp767D67DgaCgaT11AY.1130.000142
ORF1ab/nsp767D67DgaCgaT11AY.120.000316
ORF1ab/nsp767D67DgaCgaT11AY.1200.000037
ORF1ab/nsp767D67DgaCgaT11AY.1210.000135
ORF1ab/nsp767D67YGacTac11AY.170.008197
ORF1ab/nsp767D67DgaCgaT11AY.20.000356
ORF1ab/nsp767D67HGacCac11AY.200.000039
ORF1ab/nsp767D67YGacTac11AY.270.000065
ORF1ab/nsp767D67DgaCgaT11AY.3.10.000085
ORF1ab/nsp767D67YGacTac11AY.330.000067
ORF1ab/nsp767D67DgaCgaT11AY.340.000097
ORF1ab/nsp767D67GgAcgGc11AY.40.000002
ORF1ab/nsp767D67DgaCgaT11AY.4.2.10.000149
ORF1ab/nsp767D67DgaCgaT11AY.400.000964
ORF1ab/nsp767D67delGAC---11AY.430.000004
ORF1ab/nsp767D67del1gACg-T11AY.440.000006
ORF1ab/nsp767D67SGAcAGc11AY.440.000006
ORF1ab/nsp767D67DgaCgaT11AY.450.000122
ORF1ab/nsp767D67DgaCgaT11AY.46.40.000165
ORF1ab/nsp767D67DgaCgaT11AY.470.000031
ORF1ab/nsp767D67DgaCgaT11AY.5.30.000337
ORF1ab/nsp767D67DgaCgaT11AY.530.000288
ORF1ab/nsp767D67DgaCgaT11AY.540.000095
ORF1ab/nsp767D67YGacTac11AY.550.000917
ORF1ab/nsp767D67DgaCgaT11AY.610.000105
ORF1ab/nsp767D67DgaCgaT11AY.620.000436
ORF1ab/nsp767D67DgaCgaT11AY.640.000595
ORF1ab/nsp767D67DgaCgaT11AY.740.000116
ORF1ab/nsp767D67DgaCgaT11AY.75.10.00018
ORF1ab/nsp767D67DgaCgaT11AY.850.000427
ORF1ab/nsp767D67DgaCgaT11AY.870.000833
ORF1ab/nsp767D67YGacTac11AY.870.000833
ORF1ab/nsp767D67DgaCgaT11AY.90.000068
ORF1ab/nsp767D67DgaCgaT11AY.9.20.000037
ORF1ab/nsp767D67DgaCgaT11AY.900.000684
ORF1ab/nsp767D67HGacCac11AY.920.000287
ORF1ab/nsp767D67DgaCgaT11AY.950.000761
ORF1ab/nsp767D67NGacAac11B.10.000009
ORF1ab/nsp767D67HGacCac11B.10.000009
ORF1ab/nsp767D67GgAcgGc11B.10.000009
ORF1ab/nsp767D67delGAC---11B.10.000009
ORF1ab/nsp767D67GgACgGT11B.1.10.000018
ORF1ab/nsp767D67DgaCgaT11B.1.1.1170.009709
ORF1ab/nsp767D67DgaCgaT11B.1.1.1530.001095
ORF1ab/nsp767D67DgaCgaT11B.1.1.1860.003436
ORF1ab/nsp767D67DgaCgaT11B.1.1.2160.00089
ORF1ab/nsp767D67DgaCgaT11B.1.1.2200.001859
ORF1ab/nsp767D67DgaCgaT11B.1.1.2220.000204
ORF1ab/nsp767D67DgaCgaT11B.1.1.2370.005405
ORF1ab/nsp767D67DgaCgaT11B.1.1.250.000569
ORF1ab/nsp767D67DgaCgaT11B.1.1.2840.000107
ORF1ab/nsp767D67GgAcgGc11B.1.1.2860.002899
ORF1ab/nsp767D67DgaCgaT11B.1.1.3090.005848
ORF1ab/nsp767D67DgaCgaT11B.1.1.3110.000358
ORF1ab/nsp767D67DgaCgaT11B.1.1.3170.000412
ORF1ab/nsp767D67DgaCgaT11B.1.1.3260.001761
ORF1ab/nsp767D67DgaCgaT11B.1.1.3490.010309
ORF1ab/nsp767D67DgaCgaT11B.1.1.370.000193
ORF1ab/nsp767D67DgaCgaT11B.1.1.3710.010417
ORF1ab/nsp767D67DgaCgaT11B.1.1.3890.006061
ORF1ab/nsp767D67DgaCgaT11B.1.1.390.00051
ORF1ab/nsp767D67YGacTac11B.1.1.4020.011111
ORF1ab/nsp767D67delGAC---11B.1.1.4480.002033
ORF1ab/nsp767D67DgaCgaT11B.1.1.4620.008621
ORF1ab/nsp767D67DgaCgaT11B.1.1.500.000679
ORF1ab/nsp767D67DgaCgaT11B.1.1.530.013699
ORF1ab/nsp767D67VgAcgTc11B.1.1.610.008772
ORF1ab/nsp767D67EgaCgaG11B.1.1.70.000001
ORF1ab/nsp767D67KGaCAaG11B.1.1.70.000001
ORF1ab/nsp767D67DgaCgaT11B.1.1.700.000341
ORF1ab/nsp767D67DgaCgaT11B.1.1700.00431
ORF1ab/nsp767D67DgaCgaT11B.1.177.120.000152
ORF1ab/nsp767D67DgaCgaT11B.1.177.440.000519
ORF1ab/nsp767D67DgaCgaT11B.1.177.570.000281
ORF1ab/nsp767D67DgaCgaT11B.1.177.60.000977
ORF1ab/nsp767D67DgaCgaT11B.1.177.70.000165
ORF1ab/nsp767D67DgaCgaT11B.1.177.770.000726
ORF1ab/nsp767D67delGAC---11B.1.177.830.001481
ORF1ab/nsp767D67SGAcAGc11B.1.20.000009
ORF1ab/nsp767D67YGacTac11B.1.20.000009
ORF1ab/nsp767D67NGacAac11B.1.2060.000816
ORF1ab/nsp767D67DgaCgaT11B.1.2100.002132
ORF1ab/nsp767D67DgaCgaT11B.1.2150.009615
ORF1ab/nsp767D67DgaCgaT11B.1.221.30.000833
ORF1ab/nsp767D67DgaCgaT11B.1.221.40.004167
ORF1ab/nsp767D67DgaCgaT11B.1.2340.000132
ORF1ab/nsp767D67NGacAac11B.1.2580.000067
ORF1ab/nsp767D67DgaCgaT11B.1.2600.003344
ORF1ab/nsp767D67DgaCgaT11B.1.2650.001271
ORF1ab/nsp767D67YGacTac11B.1.2790.000514
ORF1ab/nsp767D67DgaCgaT11B.1.3110.000275
ORF1ab/nsp767D67YGacTac11B.1.3510.00003
ORF1ab/nsp767D67AgAcgCc11B.1.3510.00003
ORF1ab/nsp767D67YGacTac11B.1.351.30.000876
ORF1ab/nsp767D67DgaCgaT11B.1.36.180.00042
ORF1ab/nsp767D67DgaCgaT11B.1.36.290.000517
ORF1ab/nsp767D67DgaCgaT11B.1.3820.008929
ORF1ab/nsp767D67DgaCgaT11B.1.3890.001002
ORF1ab/nsp767D67DgaCgaT11B.1.438.10.000107
ORF1ab/nsp767D67DgaCgaT11B.1.4560.003268
ORF1ab/nsp767D67DgaCgaT11B.1.5030.002488
ORF1ab/nsp767D67DgaCgaT11B.1.5050.004386
ORF1ab/nsp767D67DgaCgaT11B.1.5240.001406
ORF1ab/nsp767D67GgAcgGc11B.1.5250.000113
ORF1ab/nsp767D67delGAC---11B.1.5260.000024
ORF1ab/nsp767D67DgaCgaT11B.1.5330.009615
ORF1ab/nsp767D67HGacCac11B.1.5610.000397
ORF1ab/nsp767D67DgaCgaT11B.1.5800.004065
ORF1ab/nsp767D67YGacTac11B.1.5990.00365
ORF1ab/nsp767D67YGacTac11B.1.617.20.000004
ORF1ab/nsp767D67AgAcgCc11B.1.617.20.000004
ORF1ab/nsp767D67YGacTac11B.1.6210.000089
ORF1ab/nsp767D67DgaCgaT11B.30.000831
ORF1ab/nsp767D67YGacTac11B.4.50.011905
ORF1ab/nsp767D67DgaCgaT11B.400.000364
ORF1ab/nsp767D67VgAcgTc11C.170.055556
ORF1ab/nsp767D67delGAC---11C.370.000116
ORF1ab/nsp767D67HGacCac11D.20.000075
ORF1ab/nsp767D67YGacTac11D.30.005917
ORF1ab/nsp767D67delGAC---11N.40.004255
ORF1ab/nsp767D67NGacAac11P.10.000016
ORF1ab/nsp767D67DgaCgaT11P.1.100.000269
ORF1ab/nsp767D67YGacTac11P.1.130.000898
ORF1ab/nsp767D67GgAcgGc11P.1.140.000048
ORF1ab/nsp767D67NGacAac11P.1.170.000162
ORF1ab/nsp767D67GgAcgGc11Q.30.000145
ORF1ab/nsp767D67DgaCgaT11Q.80.000165