CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp7 : CodonNum = 61 & Codon = tcT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp761S61SS3920SsyntcCtcT12815127900.99804912023-12025

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp761S61StcCtcT1279012815All0.002446
ORF1ab/nsp761S61StcCtcT51815186B.1.1.70.004638
ORF1ab/nsp761S61StcCtcT763764B.1.617.20.002873
ORF1ab/nsp761S61StcCtcT631631B.1.1.4640.929308
ORF1ab/nsp761S61StcCtcT609609AY.4.20.013208
ORF1ab/nsp761S61StcCtcT600600B.1.258.110.237812
ORF1ab/nsp761S61StcCtcT581581AY.250.003495
ORF1ab/nsp761S61StcCtcT405405AY.1160.116146
ORF1ab/nsp761S61StcCtcT332332AY.610.034786
ORF1ab/nsp761S61StcCtcT328328AW.11
ORF1ab/nsp761S61StcCtcT294295AY.40.000458
ORF1ab/nsp761S61StcCtcT279279AY.430.001236
ORF1ab/nsp761S61StcCtcT195198B.10.001786
ORF1ab/nsp761S61StcCtcT146147B.1.20.001286
ORF1ab/nsp761S61StcCtcT141141B.1.5440.849398
ORF1ab/nsp761S61StcCtcT126126AY.440.000767
ORF1ab/nsp761S61StcCtcT103103B.1.2580.006854
ORF1ab/nsp761S61StcCtcT9798B.1.10.00176
ORF1ab/nsp761S61StcCtcT8989AY.1030.000553
ORF1ab/nsp761S61StcCtcT8989AY.390.002199
ORF1ab/nsp761S61StcCtcT8787B.1.160.250.966667
ORF1ab/nsp761S61StcCtcT6262AY.75.10.011179
ORF1ab/nsp761S61StcCtcT5758P.10.000898
ORF1ab/nsp761S61StcCtcT5353B.1.1770.000698
ORF1ab/nsp761S61StcCtcT5151AY.340.004945
ORF1ab/nsp761S61StcCtcT5151B.1.4290.0012
ORF1ab/nsp761S61StcCtcT4949AY.30.000487
ORF1ab/nsp761S61StcCtcT4444AY.3.10.003751
ORF1ab/nsp761S61StcCtcT3637AY.1020.000955
ORF1ab/nsp761S61StcCtcT3535AY.260.000991
ORF1ab/nsp761S61StcCtcT3535B.1.5260.000823
ORF1ab/nsp761S61StcCtcT3434AY.1000.001564
ORF1ab/nsp761S61StcCtcT3334AY.39.10.001307
ORF1ab/nsp761S61StcCtcT3333B.1.6370.002411
ORF1ab/nsp761S61StcCtcT2626AY.1190.000918
ORF1ab/nsp761S61StcCtcT2626AY.690.004853
ORF1ab/nsp761S61StcCtcT2626AY.70.005096
ORF1ab/nsp761S61StcCtcT2525AY.90.00169
ORF1ab/nsp761S61StcCtcT2323B.1.1.2770.017451
ORF1ab/nsp761S61StcCtcT2222AY.1050.014148
ORF1ab/nsp761S61StcCtcT2020B.1.1.1890.030257
ORF1ab/nsp761S61StcCtcT2020B.1.1.5190.000794
ORF1ab/nsp761S61StcCtcT1919B.1.1.4200.019115
ORF1ab/nsp761S61StcCtcT1818B.1.177.570.005058
ORF1ab/nsp761S61StcCtcT1717B.1.36.80.017
ORF1ab/nsp761S61StcCtcT1717P.1.150.00395
ORF1ab/nsp761S61StcCtcT1616B.1.1.4240.727273
ORF1ab/nsp761S61StcCtcT1616B.1.1600.000499
ORF1ab/nsp761S61StcCtcT1515B.1.3510.000446
ORF1ab/nsp761S61StcCtcT1515P.1.120.00726
ORF1ab/nsp761S61StcCtcT1414AY.270.000906
ORF1ab/nsp761S61StcCtcT1414AY.290.000221
ORF1ab/nsp761S61StcCtcT1414AY.460.001457
ORF1ab/nsp761S61StcCtcT1414AY.46.60.001011
ORF1ab/nsp761S61StcCtcT1414AY.710.006651
ORF1ab/nsp761S61StcCtcT1114B.1.177.600.002403
ORF1ab/nsp761S61StcCtcT1313AU.20.031477
ORF1ab/nsp761S61StcCtcT1313AY.140.001144
ORF1ab/nsp761S61StcCtcT1313AY.200.000505
ORF1ab/nsp761S61StcCtcT1212AY.100.006359
ORF1ab/nsp761S61StcCtcT1212AY.120.10.003852
ORF1ab/nsp761S61StcCtcT1212AY.130.001932
ORF1ab/nsp761S61StcCtcT1212AY.34.10.006119
ORF1ab/nsp761S61StcCtcT1212AY.450.00146
ORF1ab/nsp761S61StcCtcT1212B.1.2210.000852
ORF1ab/nsp761S61StcCtcT1212B.1.3200.014944
ORF1ab/nsp761S61StcCtcT1111AY.360.00163
ORF1ab/nsp761S61StcCtcT1111B.1.1.330.00463
ORF1ab/nsp761S61StcCtcT1010AY.1110.001832
ORF1ab/nsp761S61StcCtcT1010AY.23.10.004174
ORF1ab/nsp761S61StcCtcT1010AY.370.003161
ORF1ab/nsp761S61StcCtcT1010B.1.1.80.035842
ORF1ab/nsp761S61StcCtcT1010P.1.140.000478
ORF1ab/nsp761S61StcCtcT1010Q.80.001649
ORF1ab/nsp761S61StcCtcT99AY.4.2.10.001341
ORF1ab/nsp761S61StcCtcT99AY.420.000362
ORF1ab/nsp761S61StcCtcT99B.1.36.360.005418
ORF1ab/nsp761S61StcCtcT89B.1.4270.000404
ORF1ab/nsp761S61StcCtcT88AY.16.10.003759
ORF1ab/nsp761S61StcCtcT88AY.730.005323
ORF1ab/nsp761S61StcCtcT88B.1.1.2140.000444
ORF1ab/nsp761S61StcCtcT88B.1.438.10.000858
ORF1ab/nsp761S61StcCtcT88B.1.5960.000697
ORF1ab/nsp761S61StcCtcT67AY.470.000187
ORF1ab/nsp761S61StcCtcT77AY.50.000145
ORF1ab/nsp761S61StcCtcT77B.1.360.001021
ORF1ab/nsp761S61StcCtcT77B.1.621.10.003541
ORF1ab/nsp761S61StcCtcT77C.370.000812
ORF1ab/nsp761S61StcCtcT66AY.1210.000812
ORF1ab/nsp761S61StcCtcT66AY.230.000418
ORF1ab/nsp761S61StcCtcT66AY.330.000401
ORF1ab/nsp761S61StcCtcT66AY.530.001725
ORF1ab/nsp761S61StcCtcT66AY.620.002614
ORF1ab/nsp761S61StcCtcT66AY.650.003198
ORF1ab/nsp761S61StcCtcT66AY.7.20.003356
ORF1ab/nsp761S61StcCtcT66AY.750.000336
ORF1ab/nsp761S61StcCtcT66AY.980.000474
ORF1ab/nsp761S61StcCtcT66B.1.1110.007051
ORF1ab/nsp761S61StcCtcT66B.1.1270.013187
ORF1ab/nsp761S61StcCtcT66B.1.177.200.009105
ORF1ab/nsp761S61StcCtcT56B.1.2430.000348
ORF1ab/nsp761S61StcCtcT66B.1.617.10.000774
ORF1ab/nsp761S61StcCtcT66B.1.6210.000531
ORF1ab/nsp761S61StcCtcT66B.570.090909
ORF1ab/nsp761S61StcCtcT55AY.380.002496
ORF1ab/nsp761S61StcCtcT55AY.740.000578
ORF1ab/nsp761S61StcCtcT55AY.80.00303
ORF1ab/nsp761S61StcCtcT55AY.99.20.000461
ORF1ab/nsp761S61StcCtcT55B.1.1.4460.384615
ORF1ab/nsp761S61StcCtcT55B.1.4130.021277
ORF1ab/nsp761S61StcCtcT55B.1.4700.007022
ORF1ab/nsp761S61StcCtcT55B.1.6280.001762
ORF1ab/nsp761S61StcCtcT44AE.10.045455
ORF1ab/nsp761S61StcCtcT44AY.320.00213
ORF1ab/nsp761S61StcCtcT44AY.60.000165
ORF1ab/nsp761S61StcCtcT44AY.670.001857
ORF1ab/nsp761S61StcCtcT44B.1.177.810.000757
ORF1ab/nsp761S61StcCtcT44B.1.177.860.000734
ORF1ab/nsp761S61StcCtcT44B.1.258.170.000416
ORF1ab/nsp761S61StcCtcT44B.1.36.290.002069
ORF1ab/nsp761S61StcCtcT44B.1.4620.028986
ORF1ab/nsp761S61StcCtcT44B.1.5170.001708
ORF1ab/nsp761S61StcCtcT44D.20.0003
ORF1ab/nsp761S61StcCtcT44R.10.00036
ORF1ab/nsp761S61StcCtcT33A.10.000846
ORF1ab/nsp761S61StcCtcT33AY.116.10.000934
ORF1ab/nsp761S61StcCtcT33AY.1170.000254
ORF1ab/nsp761S61StcCtcT33AY.190.003421
ORF1ab/nsp761S61StcCtcT33AY.46.40.000494
ORF1ab/nsp761S61StcCtcT33AY.5.30.001012
ORF1ab/nsp761S61StcCtcT33AY.520.002443
ORF1ab/nsp761S61StcCtcT33AY.550.002752
ORF1ab/nsp761S61StcCtcT33AY.640.001786
ORF1ab/nsp761S61StcCtcT33AY.680.000821
ORF1ab/nsp761S61StcCtcT33AY.790.003632
ORF1ab/nsp761S61StcCtcT33AY.840.001312
ORF1ab/nsp761S61StcCtcT33AY.9.20.00011
ORF1ab/nsp761S61StcCtcT33AY.910.002191
ORF1ab/nsp761S61StcCtcT33AY.930.000819
ORF1ab/nsp761S61StcCtcT33AY.98.10.000145
ORF1ab/nsp761S61StcCtcT33B0.000383
ORF1ab/nsp761S61StcCtcT33B.1.1.5230.004687
ORF1ab/nsp761S61StcCtcT33B.1.177.520.005272
ORF1ab/nsp761S61StcCtcT33B.1.177.770.002179
ORF1ab/nsp761S61StcCtcT33B.1.466.20.001174
ORF1ab/nsp761S61StcCtcT33C.60.111111
ORF1ab/nsp761S61StcCtcT33N.50.0053
ORF1ab/nsp761S61StcCtcT33P.1.10.000953
ORF1ab/nsp761S61StcCtcT33P.30.004785
ORF1ab/nsp761S61StcCtcT22A0.000774
ORF1ab/nsp761S61StcCtcT22A.2.40.006734
ORF1ab/nsp761S61StcCtcT22A.2.50.000998
ORF1ab/nsp761S61StcCtcT22AY.1180.000125
ORF1ab/nsp761S61StcCtcT22AY.1200.000074
ORF1ab/nsp761S61StcCtcT22AY.160.000759
ORF1ab/nsp761S61StcCtcT22AY.39.1.10.001449
ORF1ab/nsp761S61StcCtcT22AY.4.50.000215
ORF1ab/nsp761S61StcCtcT22AY.46.20.001271
ORF1ab/nsp761S61StcCtcT22AY.5.40.000553
ORF1ab/nsp761S61StcCtcT22AY.540.000191
ORF1ab/nsp761S61StcCtcT22AY.700.000417
ORF1ab/nsp761S61StcCtcT22AY.860.00166
ORF1ab/nsp761S61StcCtcT22B.1.1.1590.009346
ORF1ab/nsp761S61StcCtcT22B.1.1.2160.001781
ORF1ab/nsp761S61StcCtcT22B.1.1.2200.003717
ORF1ab/nsp761S61StcCtcT22B.1.1.2220.000408
ORF1ab/nsp761S61StcCtcT22B.1.1.2630.003115
ORF1ab/nsp761S61StcCtcT22B.1.1.2690.002706
ORF1ab/nsp761S61StcCtcT22B.1.1.2840.000215
ORF1ab/nsp761S61StcCtcT22B.1.1.3890.012121
ORF1ab/nsp761S61StcCtcT22B.1.1.500.001358
ORF1ab/nsp761S61StcCtcT22B.1.1.630.000772
ORF1ab/nsp761S61StcCtcT22B.1.177.440.001038
ORF1ab/nsp761S61StcCtcT22B.1.177.70.00033
ORF1ab/nsp761S61StcCtcT22B.1.2140.007326
ORF1ab/nsp761S61StcCtcT22B.1.214.20.001199
ORF1ab/nsp761S61StcCtcT22B.1.2400.000431
ORF1ab/nsp761S61StcCtcT22B.1.36.70.008
ORF1ab/nsp761S61StcCtcT22B.1.4000.000858
ORF1ab/nsp761S61StcCtcT22B.1.4990.002101
ORF1ab/nsp761S61StcCtcT22B.1.5240.002813
ORF1ab/nsp761S61StcCtcT22B.1.5650.001621
ORF1ab/nsp761S61StcCtcT22B.1.5770.001375
ORF1ab/nsp761S61StcCtcT22B.1.6090.000959
ORF1ab/nsp761S61StcCtcT22C.230.011628
ORF1ab/nsp761S61StcCtcT12P.1.100.000269
ORF1ab/nsp761S61StcCtcT22Q.10.000253
ORF1ab/nsp761S61StcCtcT22W.10.017391
ORF1ab/nsp761S61StcCtcT11A.210.00277
ORF1ab/nsp761S61StcCtcT11A.23.10.000704
ORF1ab/nsp761S61StcCtcT11AL.10.012987
ORF1ab/nsp761S61StcCtcT11AY.10.000396
ORF1ab/nsp761S61StcCtcT11AY.1060.000335
ORF1ab/nsp761S61StcCtcT11AY.1070.000466
ORF1ab/nsp761S61StcCtcT11AY.1100.000113
ORF1ab/nsp761S61StcCtcT11AY.1130.000142
ORF1ab/nsp761S61StcCtcT11AY.1140.000231
ORF1ab/nsp761S61StcCtcT11AY.29.10.000221
ORF1ab/nsp761S61StcCtcT11AY.350.000233
ORF1ab/nsp761S61StcCtcT11AY.400.000964
ORF1ab/nsp761S61StcCtcT11AY.410.000294
ORF1ab/nsp761S61StcCtcT11AY.46.50.000198
ORF1ab/nsp761S61StcCtcT11AY.480.000465
ORF1ab/nsp761S61StcCtcT11AY.510.000909
ORF1ab/nsp761S61StcCtcT11AY.560.001605
ORF1ab/nsp761S61StcCtcT11AY.590.00053
ORF1ab/nsp761S61StcCtcT11AY.7.10.000113
ORF1ab/nsp761S61StcCtcT11AY.720.001361
ORF1ab/nsp761S61StcCtcT11AY.850.000427
ORF1ab/nsp761S61StcCtcT11AY.870.000833
ORF1ab/nsp761S61StcCtcT11AY.9.10.000084
ORF1ab/nsp761S61StcCtcT11AY.900.000684
ORF1ab/nsp761S61StcCtcT11AY.920.000287
ORF1ab/nsp761S61StcCtcT11AY.950.000761
ORF1ab/nsp761S61StcCtcT11AY.990.001049
ORF1ab/nsp761S61StcCtcT11B.1.1.100.001115
ORF1ab/nsp761S61StcCtcT11B.1.1.1170.009709
ORF1ab/nsp761S61StcCtcT11B.1.1.1700.001247
ORF1ab/nsp761S61StcCtcT11B.1.1.1870.00885
ORF1ab/nsp761S61StcCtcT11B.1.1.2210.010101
ORF1ab/nsp761S61StcCtcT11B.1.1.2280.003049
ORF1ab/nsp761S61StcCtcT11B.1.1.2430.004082
ORF1ab/nsp761S61StcCtcT11B.1.1.250.000569
ORF1ab/nsp761S61StcCtcT11B.1.1.2740.005051
ORF1ab/nsp761S61StcCtcT11B.1.1.2940.001266
ORF1ab/nsp761S61StcCtcT11B.1.1.3040.002809
ORF1ab/nsp761S61StcCtcT11B.1.1.3110.000358
ORF1ab/nsp761S61StcCtcT11B.1.1.3480.000796
ORF1ab/nsp761S61StcCtcT11B.1.1.3510.002793
ORF1ab/nsp761S61StcCtcT11B.1.1.4120.007634
ORF1ab/nsp761S61StcCtcT11B.1.1.4320.001266
ORF1ab/nsp761S61StcCtcT11B.1.1.4340.000349
ORF1ab/nsp761S61StcCtcT11B.1.1.5240.020833
ORF1ab/nsp761S61StcCtcT11B.1.1.700.000341
ORF1ab/nsp761S61StcCtcT11B.1.1.830.00271
ORF1ab/nsp761S61StcCtcT11B.1.110.30.000718
ORF1ab/nsp761S61StcCtcT11B.1.1260.001276
ORF1ab/nsp761S61StcCtcT11B.1.160.220.006757
ORF1ab/nsp761S61StcCtcT11B.1.177.170.000821
ORF1ab/nsp761S61StcCtcT11B.1.177.210.000076
ORF1ab/nsp761S61StcCtcT11B.1.177.540.000606
ORF1ab/nsp761S61StcCtcT11B.1.177.620.001192
ORF1ab/nsp761S61StcCtcT11B.1.177.750.001041
ORF1ab/nsp761S61StcCtcT11B.1.2060.000816
ORF1ab/nsp761S61StcCtcT11B.1.2100.002132
ORF1ab/nsp761S61StcCtcT11B.1.2320.000537
ORF1ab/nsp761S61StcCtcT11B.1.2340.000132
ORF1ab/nsp761S61StcCtcT11B.1.2600.003344
ORF1ab/nsp761S61StcCtcT11B.1.2650.001271
ORF1ab/nsp761S61StcCtcT11B.1.2930.0125
ORF1ab/nsp761S61StcCtcT11B.1.2980.002114
ORF1ab/nsp761S61StcCtcT11B.1.3190.003049
ORF1ab/nsp761S61StcCtcT11B.1.3440.008197
ORF1ab/nsp761S61StcCtcT11B.1.351.20.000303
ORF1ab/nsp761S61StcCtcT11B.1.351.30.000876
ORF1ab/nsp761S61StcCtcT11B.1.36.190.009259
ORF1ab/nsp761S61StcCtcT11B.1.36.310.001751
ORF1ab/nsp761S61StcCtcT11B.1.3610.001289
ORF1ab/nsp761S61StcCtcT11B.1.3960.000706
ORF1ab/nsp761S61StcCtcT11B.1.4280.00102
ORF1ab/nsp761S61StcCtcT11B.1.4680.005714
ORF1ab/nsp761S61StcCtcT11B.1.5110.034483
ORF1ab/nsp761S61StcCtcT11B.1.5330.009615
ORF1ab/nsp761S61StcCtcT11B.1.5610.000397
ORF1ab/nsp761S61StcCtcT11B.1.5640.000426
ORF1ab/nsp761S61StcCtcT11B.1.5800.004065
ORF1ab/nsp761S61StcCtcT11B.1.5820.000491
ORF1ab/nsp761S61StcCtcT11B.1.5900.004545
ORF1ab/nsp761S61StcCtcT11B.1.5950.000261
ORF1ab/nsp761S61StcCtcT11B.1.6120.002653
ORF1ab/nsp761S61StcCtcT11B.1.6230.000536
ORF1ab/nsp761S61StcCtcT11B.1.6310.003367
ORF1ab/nsp761S61StcCtcT11B.1.88.10.004808
ORF1ab/nsp761S61StcCtcT11B.1.910.002075
ORF1ab/nsp761S61StcCtcT11B.6.60.000889
ORF1ab/nsp761S61StcCtcT11C.360.000911
ORF1ab/nsp761S61StcCtcT11K.10.02381
ORF1ab/nsp761S61StcCtcT11Q.70.001111