CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp7 | 61 | S61S | S3920S | syn | tcC | tcT | 12815 | 12790 | 0.998049 | 12023-12025 |
ORF1ab/nsp7 | 61 | S61S | S3920S | syn | tcC | tcA | 12815 | 23 | 0.00179477 | 12023-12025 |
ORF1ab/nsp7 | 61 | S61S | S3920S | syn | tcC | tcG | 12815 | 2 | 0.000156067 | 12023-12025 |
ORF1ab/nsp7 | 61 | S61A | S3920A | nonsyn | Tcc | Gcc | 66 | 66 | 1 | 12023-12025 |
ORF1ab/nsp7 | 61 | S61F | S3920F | nonsyn | tCc | tTc | 26 | 26 | 1 | 12023-12025 |
ORF1ab/nsp7 | 61 | S61del | S3920del | del | TCC | --- | 24 | 24 | 1 | 12023-12025 |
ORF1ab/nsp7 | 61 | S61C | S3920C | nonsyn | tCc | tGc | 15 | 15 | 1 | 12023-12025 |
ORF1ab/nsp7 | 61 | S61T | S3920T | nonsyn | Tcc | Acc | 9 | 9 | 1 | 12023-12025 |
ORF1ab/nsp7 | 61 | S61P | S3920P | nonsyn | Tcc | Ccc | 8 | 8 | 1 | 12023-12025 |
ORF1ab/nsp7 | 61 | S61Y | S3920Y | nonsyn | tCc | tAc | 8 | 8 | 1 | 12023-12025 |
ORF1ab/nsp7 | 61 | S61L | S3920L | nonsyn | tCC | tTA | 2 | 2 | 1 | 12023-12025 |
ORF1ab/nsp7 | 61 | S61X | S3920X | nonsyn | tCC | tAA | 2 | 2 | 1 | 12023-12025 |
ORF1ab/nsp7 | 61 | S61N | S3920N | nonsyn | TCc | AAc | 2 | 2 | 1 | 12023-12025 |
ORF1ab/nsp7 | 61 | S61K | S3920K | nonsyn | TCC | AAA | 2 | 2 | 1 | 12023-12025 |
ORF1ab/nsp7 | 61 | S61W | S3920W | nonsyn | tCC | tGG | 1 | 1 | 1 | 12023-12025 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 12790 | 12815 | All | 0.002446 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcA | 23 | 12815 | All | 0.000004 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcG | 2 | 12815 | All | 0 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 5181 | 5186 | B.1.1.7 | 0.004638 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcA | 4 | 5186 | B.1.1.7 | 0.000004 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcG | 1 | 5186 | B.1.1.7 | 0.000001 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 763 | 764 | B.1.617.2 | 0.002873 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcA | 1 | 764 | B.1.617.2 | 0.000004 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 631 | 631 | B.1.1.464 | 0.929308 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 609 | 609 | AY.4.2 | 0.013208 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 600 | 600 | B.1.258.11 | 0.237812 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 581 | 581 | AY.25 | 0.003495 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 405 | 405 | AY.116 | 0.116146 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 332 | 332 | AY.61 | 0.034786 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 328 | 328 | AW.1 | 1 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 294 | 295 | AY.4 | 0.000458 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcA | 1 | 295 | AY.4 | 0.000002 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 279 | 279 | AY.43 | 0.001236 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 195 | 198 | B.1 | 0.001786 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcA | 3 | 198 | B.1 | 0.000027 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 146 | 147 | B.1.2 | 0.001286 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcA | 1 | 147 | B.1.2 | 0.000009 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 141 | 141 | B.1.544 | 0.849398 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 126 | 126 | AY.44 | 0.000767 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 103 | 103 | B.1.258 | 0.006854 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 97 | 98 | B.1.1 | 0.00176 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcA | 1 | 98 | B.1.1 | 0.000018 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 89 | 89 | AY.103 | 0.000553 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 89 | 89 | AY.39 | 0.002199 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 87 | 87 | B.1.160.25 | 0.966667 |
ORF1ab/nsp7 | 61 | S61A | Tcc | Gcc | 66 | 66 | All | 0.000013 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 62 | 62 | AY.75.1 | 0.011179 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 57 | 58 | P.1 | 0.000898 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcG | 1 | 58 | P.1 | 0.000016 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 53 | 53 | B.1.177 | 0.000698 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 51 | 51 | AY.34 | 0.004945 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 51 | 51 | B.1.429 | 0.0012 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 49 | 49 | AY.3 | 0.000487 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 44 | 44 | AY.3.1 | 0.003751 |
ORF1ab/nsp7 | 61 | S61A | Tcc | Gcc | 40 | 40 | AY.69 | 0.007467 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 36 | 37 | AY.102 | 0.000955 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcA | 1 | 37 | AY.102 | 0.000027 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 35 | 35 | AY.26 | 0.000991 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 35 | 35 | B.1.526 | 0.000823 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 34 | 34 | AY.100 | 0.001564 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 33 | 34 | AY.39.1 | 0.001307 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcA | 1 | 34 | AY.39.1 | 0.00004 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 33 | 33 | B.1.637 | 0.002411 |
ORF1ab/nsp7 | 61 | S61F | tCc | tTc | 26 | 26 | All | 0.000005 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 26 | 26 | AY.119 | 0.000918 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 26 | 26 | AY.69 | 0.004853 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 26 | 26 | AY.7 | 0.005096 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 25 | 25 | AY.9 | 0.00169 |
ORF1ab/nsp7 | 61 | S61del | TCC | --- | 24 | 24 | All | 0.000005 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 23 | 23 | B.1.1.277 | 0.017451 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 22 | 22 | AY.105 | 0.014148 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 20 | 20 | B.1.1.189 | 0.030257 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 20 | 20 | B.1.1.519 | 0.000794 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 19 | 19 | B.1.1.420 | 0.019115 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 18 | 18 | B.1.177.57 | 0.005058 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 17 | 17 | B.1.36.8 | 0.017 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 17 | 17 | P.1.15 | 0.00395 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 16 | 16 | B.1.1.424 | 0.727273 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 16 | 16 | B.1.160 | 0.000499 |
ORF1ab/nsp7 | 61 | S61C | tCc | tGc | 15 | 15 | All | 0.000003 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 15 | 15 | B.1.351 | 0.000446 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 15 | 15 | P.1.12 | 0.00726 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 14 | 14 | AY.27 | 0.000906 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 14 | 14 | AY.29 | 0.000221 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 14 | 14 | AY.46 | 0.001457 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 14 | 14 | AY.46.6 | 0.001011 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 14 | 14 | AY.71 | 0.006651 |
ORF1ab/nsp7 | 61 | S61C | tCc | tGc | 14 | 14 | B.1.177 | 0.000184 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 11 | 14 | B.1.177.60 | 0.002403 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcA | 3 | 14 | B.1.177.60 | 0.000655 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 13 | 13 | AU.2 | 0.031477 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 13 | 13 | AY.14 | 0.001144 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 13 | 13 | AY.20 | 0.000505 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 12 | 12 | AY.10 | 0.006359 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 12 | 12 | AY.120.1 | 0.003852 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 12 | 12 | AY.13 | 0.001932 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 12 | 12 | AY.34.1 | 0.006119 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 12 | 12 | AY.45 | 0.00146 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 12 | 12 | B.1.221 | 0.000852 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 12 | 12 | B.1.320 | 0.014944 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 11 | 11 | AY.36 | 0.00163 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 11 | 11 | B.1.1.33 | 0.00463 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 10 | 10 | AY.111 | 0.001832 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 10 | 10 | AY.23.1 | 0.004174 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 10 | 10 | AY.37 | 0.003161 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 10 | 10 | B.1.1.8 | 0.035842 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 10 | 10 | P.1.14 | 0.000478 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 10 | 10 | Q.8 | 0.001649 |
ORF1ab/nsp7 | 61 | S61T | Tcc | Acc | 9 | 9 | All | 0.000002 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 9 | 9 | AY.4.2.1 | 0.001341 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 9 | 9 | AY.42 | 0.000362 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 9 | 9 | B.1.36.36 | 0.005418 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 8 | 9 | B.1.427 | 0.000404 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcA | 1 | 9 | B.1.427 | 0.00005 |
ORF1ab/nsp7 | 61 | S61Y | tCc | tAc | 8 | 8 | All | 0.000002 |
ORF1ab/nsp7 | 61 | S61P | Tcc | Ccc | 8 | 8 | All | 0.000002 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 8 | 8 | AY.16.1 | 0.003759 |
ORF1ab/nsp7 | 61 | S61T | Tcc | Acc | 8 | 8 | AY.43 | 0.000035 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 8 | 8 | AY.73 | 0.005323 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 8 | 8 | B.1.1.214 | 0.000444 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 8 | 8 | B.1.438.1 | 0.000858 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 8 | 8 | B.1.596 | 0.000697 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 6 | 7 | AY.47 | 0.000187 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcA | 1 | 7 | AY.47 | 0.000031 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 7 | 7 | AY.5 | 0.000145 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 7 | 7 | B.1.36 | 0.001021 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 7 | 7 | B.1.621.1 | 0.003541 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 7 | 7 | C.37 | 0.000812 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 6 | 6 | AY.121 | 0.000812 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 6 | 6 | AY.23 | 0.000418 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 6 | 6 | AY.33 | 0.000401 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 6 | 6 | AY.53 | 0.001725 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 6 | 6 | AY.62 | 0.002614 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 6 | 6 | AY.65 | 0.003198 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 6 | 6 | AY.7.2 | 0.003356 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 6 | 6 | AY.75 | 0.000336 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 6 | 6 | AY.98 | 0.000474 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 6 | 6 | B.1.111 | 0.007051 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 6 | 6 | B.1.127 | 0.013187 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 6 | 6 | B.1.177.20 | 0.009105 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 5 | 6 | B.1.243 | 0.000348 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcA | 1 | 6 | B.1.243 | 0.00007 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 6 | 6 | B.1.617.1 | 0.000774 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 6 | 6 | B.1.621 | 0.000531 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 6 | 6 | B.57 | 0.090909 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 5 | 5 | AY.38 | 0.002496 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 5 | 5 | AY.74 | 0.000578 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 5 | 5 | AY.8 | 0.00303 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 5 | 5 | AY.99.2 | 0.000461 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 5 | 5 | B.1.1.446 | 0.384615 |
ORF1ab/nsp7 | 61 | S61A | Tcc | Gcc | 5 | 5 | B.1.1.7 | 0.000004 |
ORF1ab/nsp7 | 61 | S61del | TCC | --- | 5 | 5 | B.1.1.7 | 0.000004 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 5 | 5 | B.1.413 | 0.021277 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 5 | 5 | B.1.470 | 0.007022 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 5 | 5 | B.1.628 | 0.001762 |
ORF1ab/nsp7 | 61 | S61del | TCC | --- | 4 | 4 | 0.222222 | |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 4 | 4 | AE.1 | 0.045455 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 4 | 4 | AY.32 | 0.00213 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 4 | 4 | AY.6 | 0.000165 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 4 | 4 | AY.67 | 0.001857 |
ORF1ab/nsp7 | 61 | S61F | tCc | tTc | 4 | 4 | B.1 | 0.000037 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 4 | 4 | B.1.177.81 | 0.000757 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 4 | 4 | B.1.177.86 | 0.000734 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 4 | 4 | B.1.258.17 | 0.000416 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 4 | 4 | B.1.36.29 | 0.002069 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 4 | 4 | B.1.462 | 0.028986 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 4 | 4 | B.1.517 | 0.001708 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 4 | 4 | D.2 | 0.0003 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 4 | 4 | R.1 | 0.00036 |
ORF1ab/nsp7 | 61 | S61F | tCc | tTc | 3 | 3 | 0.166667 | |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 3 | 3 | A.1 | 0.000846 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 3 | 3 | AY.116.1 | 0.000934 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 3 | 3 | AY.117 | 0.000254 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 3 | 3 | AY.19 | 0.003421 |
ORF1ab/nsp7 | 61 | S61A | Tcc | Gcc | 3 | 3 | AY.4 | 0.000005 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 3 | 3 | AY.46.4 | 0.000494 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 3 | 3 | AY.5.3 | 0.001012 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 3 | 3 | AY.52 | 0.002443 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 3 | 3 | AY.55 | 0.002752 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 3 | 3 | AY.64 | 0.001786 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 3 | 3 | AY.68 | 0.000821 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 3 | 3 | AY.79 | 0.003632 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 3 | 3 | AY.84 | 0.001312 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 3 | 3 | AY.9.2 | 0.00011 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 3 | 3 | AY.91 | 0.002191 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 3 | 3 | AY.93 | 0.000819 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 3 | 3 | AY.98.1 | 0.000145 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 3 | 3 | B | 0.000383 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 3 | 3 | B.1.1.523 | 0.004687 |
ORF1ab/nsp7 | 61 | S61F | tCc | tTc | 3 | 3 | B.1.1.7 | 0.000003 |
ORF1ab/nsp7 | 61 | S61A | Tcc | Gcc | 3 | 3 | B.1.160 | 0.000094 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 3 | 3 | B.1.177.52 | 0.005272 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 3 | 3 | B.1.177.77 | 0.002179 |
ORF1ab/nsp7 | 61 | S61A | Tcc | Gcc | 3 | 3 | B.1.2 | 0.000026 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 3 | 3 | B.1.466.2 | 0.001174 |
ORF1ab/nsp7 | 61 | S61del | TCC | --- | 3 | 3 | B.1.617.2 | 0.000011 |
ORF1ab/nsp7 | 61 | S61A | Tcc | Gcc | 3 | 3 | B.1.617.2 | 0.000011 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 3 | 3 | C.6 | 0.111111 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 3 | 3 | N.5 | 0.0053 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 3 | 3 | P.1.1 | 0.000953 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 3 | 3 | P.3 | 0.004785 |
ORF1ab/nsp7 | 61 | S61Y | tCc | tAc | 2 | 2 | 0.111111 | |
ORF1ab/nsp7 | 61 | S61K | TCC | AAA | 2 | 2 | 0.111111 | |
ORF1ab/nsp7 | 61 | S61L | tCC | tTA | 2 | 2 | 0.111111 | |
ORF1ab/nsp7 | 61 | S61N | TCc | AAc | 2 | 2 | 0.111111 | |
ORF1ab/nsp7 | 61 | S61X | tCC | tAA | 2 | 2 | 0.111111 | |
ORF1ab/nsp7 | 61 | S61S | tcC | tcA | 2 | 2 | 0.111111 | |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | A | 0.000774 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | A.2.4 | 0.006734 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | A.2.5 | 0.000998 |
ORF1ab/nsp7 | 61 | S61L | tCC | tTA | 2 | 2 | All | 0 |
ORF1ab/nsp7 | 61 | S61X | tCC | tAA | 2 | 2 | All | 0 |
ORF1ab/nsp7 | 61 | S61N | TCc | AAc | 2 | 2 | All | 0 |
ORF1ab/nsp7 | 61 | S61K | TCC | AAA | 2 | 2 | All | 0 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | AY.118 | 0.000125 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | AY.16 | 0.000759 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | AY.39.1.1 | 0.001449 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | AY.4.5 | 0.000215 |
ORF1ab/nsp7 | 61 | S61del | TCC | --- | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | AY.46.2 | 0.001271 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | AY.5.4 | 0.000553 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | AY.54 | 0.000191 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | AY.70 | 0.000417 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | AY.86 | 0.00166 |
ORF1ab/nsp7 | 61 | S61A | Tcc | Gcc | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp7 | 61 | S61F | tCc | tTc | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | B.1.1.159 | 0.009346 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | B.1.1.216 | 0.001781 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | B.1.1.220 | 0.003717 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | B.1.1.222 | 0.000408 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | B.1.1.263 | 0.003115 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | B.1.1.269 | 0.002706 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | B.1.1.284 | 0.000215 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | B.1.1.389 | 0.012121 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | B.1.1.50 | 0.001358 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | B.1.1.63 | 0.000772 |
ORF1ab/nsp7 | 61 | S61P | Tcc | Ccc | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp7 | 61 | S61F | tCc | tTc | 2 | 2 | B.1.160 | 0.000062 |
ORF1ab/nsp7 | 61 | S61P | Tcc | Ccc | 2 | 2 | B.1.177 | 0.000026 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | B.1.177.44 | 0.001038 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | B.1.177.7 | 0.00033 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | B.1.214 | 0.007326 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | B.1.214.2 | 0.001199 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | B.1.240 | 0.000431 |
ORF1ab/nsp7 | 61 | S61P | Tcc | Ccc | 2 | 2 | B.1.258.17 | 0.000208 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | B.1.36.7 | 0.008 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | B.1.400 | 0.000858 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | B.1.499 | 0.002101 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | B.1.524 | 0.002813 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | B.1.565 | 0.001621 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | B.1.577 | 0.001375 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | B.1.609 | 0.000959 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | C.23 | 0.011628 |
ORF1ab/nsp7 | 61 | S61A | Tcc | Gcc | 2 | 2 | C.36 | 0.001821 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 2 | P.1.10 | 0.000269 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcA | 1 | 2 | P.1.10 | 0.000269 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | Q.1 | 0.000253 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 2 | 2 | W.1 | 0.017391 |
ORF1ab/nsp7 | 61 | S61C | tCc | tGc | 1 | 1 | 0.055556 | |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | A.21 | 0.00277 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | A.23.1 | 0.000704 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | AL.1 | 0.012987 |
ORF1ab/nsp7 | 61 | S61W | tCC | tGG | 1 | 1 | All | 0 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | AY.1 | 0.000396 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | AY.107 | 0.000466 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp7 | 61 | S61F | tCc | tTc | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp7 | 61 | S61A | Tcc | Gcc | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp7 | 61 | S61Y | tCc | tAc | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp7 | 61 | S61del | TCC | --- | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp7 | 61 | S61A | Tcc | Gcc | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp7 | 61 | S61A | Tcc | Gcc | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp7 | 61 | S61del | TCC | --- | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | AY.40 | 0.000964 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | AY.41 | 0.000294 |
ORF1ab/nsp7 | 61 | S61F | tCc | tTc | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | AY.46.5 | 0.000198 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | AY.48 | 0.000465 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | AY.51 | 0.000909 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | AY.56 | 0.001605 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp7 | 61 | S61del | TCC | --- | 1 | 1 | AY.66 | 0.00107 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | AY.72 | 0.001361 |
ORF1ab/nsp7 | 61 | S61del | TCC | --- | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | AY.87 | 0.000833 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | AY.90 | 0.000684 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp7 | 61 | S61T | Tcc | Acc | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp7 | 61 | S61del | TCC | --- | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp7 | 61 | S61P | Tcc | Ccc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.1.10 | 0.001115 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.1.117 | 0.009709 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.1.170 | 0.001247 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.1.187 | 0.00885 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.1.221 | 0.010101 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.1.228 | 0.003049 |
ORF1ab/nsp7 | 61 | S61F | tCc | tTc | 1 | 1 | B.1.1.240 | 0.004695 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.1.243 | 0.004082 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.1.274 | 0.005051 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.1.294 | 0.001266 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.1.304 | 0.002809 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.1.311 | 0.000358 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.1.351 | 0.002793 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.1.412 | 0.007634 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.1.432 | 0.001266 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp7 | 61 | S61del | TCC | --- | 1 | 1 | B.1.1.448 | 0.002033 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.1.524 | 0.020833 |
ORF1ab/nsp7 | 61 | S61W | tCC | tGG | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp7 | 61 | S61Y | tCc | tAc | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.1.83 | 0.00271 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.110.3 | 0.000718 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.126 | 0.001276 |
ORF1ab/nsp7 | 61 | S61Y | tCc | tAc | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp7 | 61 | S61F | tCc | tTc | 1 | 1 | B.1.160.15 | 0.00495 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.160.22 | 0.006757 |
ORF1ab/nsp7 | 61 | S61F | tCc | tTc | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp7 | 61 | S61Y | tCc | tAc | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.177.17 | 0.000821 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.177.54 | 0.000606 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.177.62 | 0.001192 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.177.75 | 0.001041 |
ORF1ab/nsp7 | 61 | S61A | Tcc | Gcc | 1 | 1 | B.1.177.83 | 0.001481 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.210 | 0.002132 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.232 | 0.000537 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp7 | 61 | S61F | tCc | tTc | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp7 | 61 | S61del | TCC | --- | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp7 | 61 | S61del | TCC | --- | 1 | 1 | B.1.258.3 | 0.001675 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.260 | 0.003344 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.265 | 0.001271 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.293 | 0.0125 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.298 | 0.002114 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.319 | 0.003049 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.344 | 0.008197 |
ORF1ab/nsp7 | 61 | S61F | tCc | tTc | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.36.19 | 0.009259 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.36.31 | 0.001751 |
ORF1ab/nsp7 | 61 | S61A | Tcc | Gcc | 1 | 1 | B.1.36.36 | 0.000602 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.361 | 0.001289 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcA | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.396 | 0.000706 |
ORF1ab/nsp7 | 61 | S61F | tCc | tTc | 1 | 1 | B.1.396 | 0.000706 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.428 | 0.00102 |
ORF1ab/nsp7 | 61 | S61F | tCc | tTc | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.468 | 0.005714 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.511 | 0.034483 |
ORF1ab/nsp7 | 61 | S61Y | tCc | tAc | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.533 | 0.009615 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.580 | 0.004065 |
ORF1ab/nsp7 | 61 | S61F | tCc | tTc | 1 | 1 | B.1.582 | 0.000491 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.582 | 0.000491 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.590 | 0.004545 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.612 | 0.002653 |
ORF1ab/nsp7 | 61 | S61F | tCc | tTc | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp7 | 61 | S61P | Tcc | Ccc | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.631 | 0.003367 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.88.1 | 0.004808 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.1.91 | 0.002075 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | B.6.6 | 0.000889 |
ORF1ab/nsp7 | 61 | S61del | TCC | --- | 1 | 1 | C.17 | 0.055556 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | K.1 | 0.02381 |
ORF1ab/nsp7 | 61 | S61del | TCC | --- | 1 | 1 | N.4 | 0.004255 |
ORF1ab/nsp7 | 61 | S61F | tCc | tTc | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp7 | 61 | S61Y | tCc | tAc | 1 | 1 | P.1.14 | 0.000048 |
ORF1ab/nsp7 | 61 | S61S | tcC | tcT | 1 | 1 | Q.7 | 0.001111 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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