CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp7 : CodonNum = 42 & Codon = gcC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp742A42AA3901AsyngcTgcC78710.91025611966-11968

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp742A42AgcTgcC7178All0.000014
ORF1ab/nsp742A42AgcTgcC1616B.1.1.70.000014
ORF1ab/nsp742A42AgcTgcC89B.1.617.20.00003
ORF1ab/nsp742A42AgcTgcC77AY.440.000043
ORF1ab/nsp742A42AgcTgcC55B.1.1.2140.000277
ORF1ab/nsp742A42AgcTgcC55B.1.3510.000149
ORF1ab/nsp742A42AgcTgcC44AY.50.000083
ORF1ab/nsp742A42AgcTgcC23AY.1030.000012
ORF1ab/nsp742A42AgcTgcC33AY.30.00003
ORF1ab/nsp742A42AgcTgcC33B.10.000027
ORF1ab/nsp742A42AgcTgcC22AY.430.000009
ORF1ab/nsp742A42AgcTgcC22B.1.2220.003384
ORF1ab/nsp742A42AgcTgcC11AY.200.000039
ORF1ab/nsp742A42AgcTgcC11AY.40.000002
ORF1ab/nsp742A42AgcTgcC11AY.4.20.000022
ORF1ab/nsp742A42AgcTgcC11AY.460.000104
ORF1ab/nsp742A42AgcTgcC11AY.490.003195
ORF1ab/nsp742A42AgcTgcC11AY.75.10.00018
ORF1ab/nsp742A42AgcTgcC11AY.90.000068
ORF1ab/nsp742A42AgcTgcC11B.1.1.460.004367
ORF1ab/nsp742A42AgcTgcC11B.1.1.50.008333
ORF1ab/nsp742A42AgcTgcC11B.1.1770.000013
ORF1ab/nsp742A42AgcTgcC11B.1.4270.00005
ORF1ab/nsp742A42AgcTgcC11B.1.4290.000024
ORF1ab/nsp742A42AgcTgcC11B.1.5950.000261
ORF1ab/nsp742A42AgcTgcC11B.1.617.10.000129