CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp7 : CodonNum = 42 & Codon = gTt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp742A42VA3901VnonsyngCtgTt933933111966-11968

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp742A42VgCtgTt933933All0.000178
ORF1ab/nsp742A42VgCtgTt211211AM.40.753571
ORF1ab/nsp742A42VgCtgTt188188AY.250.001131
ORF1ab/nsp742A42VgCtgTt8383B.1.1.70.000074
ORF1ab/nsp742A42VgCtgTt7878B.1.2340.010292
ORF1ab/nsp742A42VgCtgTt4242B.10.000385
ORF1ab/nsp742A42VgCtgTt3939B.1.1.4031
ORF1ab/nsp742A42VgCtgTt2727B.1.20.000238
ORF1ab/nsp742A42VgCtgTt2424B.1.4270.001212
ORF1ab/nsp742A42VgCtgTt1919AY.430.000084
ORF1ab/nsp742A42VgCtgTt1919B.1.1.500.012899
ORF1ab/nsp742A42VgCtgTt1515B.1.258.140.014706
ORF1ab/nsp742A42VgCtgTt1414AY.410.004115
ORF1ab/nsp742A42VgCtgTt1313B.1.6210.001151
ORF1ab/nsp742A42VgCtgTt1212AY.40.000019
ORF1ab/nsp742A42VgCtgTt1212B.1.5960.001046
ORF1ab/nsp742A42VgCtgTt1212B.1.617.20.000045
ORF1ab/nsp742A42VgCtgTt1111B.1.4290.000259
ORF1ab/nsp742A42VgCtgTt88B.1.177.830.011852
ORF1ab/nsp742A42VgCtgTt77AY.440.000043
ORF1ab/nsp742A42VgCtgTt77B.1.214.10.14
ORF1ab/nsp742A42VgCtgTt77B.1.5260.000165
ORF1ab/nsp742A42VgCtgTt55AY.1030.000031
ORF1ab/nsp742A42VgCtgTt55AY.4.20.000108
ORF1ab/nsp742A42VgCtgTt44AY.1020.000106
ORF1ab/nsp742A42VgCtgTt44B.1.1.370.000771
ORF1ab/nsp742A42VgCtgTt44B.1.5770.002749
ORF1ab/nsp742A42VgCtgTt33AY.120.000948
ORF1ab/nsp742A42VgCtgTt33AY.130.000483
ORF1ab/nsp742A42VgCtgTt33AY.260.000085
ORF1ab/nsp742A42VgCtgTt33B.1.177.810.000568
ORF1ab/nsp742A42VgCtgTt33P.10.000047
ORF1ab/nsp742A42VgCtgTt220.111111
ORF1ab/nsp742A42VgCtgTt22A.300.285714
ORF1ab/nsp742A42VgCtgTt22AY.30.00002
ORF1ab/nsp742A42VgCtgTt22B.1.10.000036
ORF1ab/nsp742A42VgCtgTt22B.1.177.120.000303
ORF1ab/nsp742A42VgCtgTt22B.1.2210.000142
ORF1ab/nsp742A42VgCtgTt22B.1.3510.000059
ORF1ab/nsp742A42VgCtgTt22D.20.00015
ORF1ab/nsp742A42VgCtgTt11AY.1140.000231
ORF1ab/nsp742A42VgCtgTt11AY.116.10.000311
ORF1ab/nsp742A42VgCtgTt11AY.1190.000035
ORF1ab/nsp742A42VgCtgTt11AY.390.000025
ORF1ab/nsp742A42VgCtgTt11AY.460.000104
ORF1ab/nsp742A42VgCtgTt11AY.540.000095
ORF1ab/nsp742A42VgCtgTt11AY.60.000041
ORF1ab/nsp742A42VgCtgTt11AY.9.20.000037
ORF1ab/nsp742A42VgCtgTt11B.1.1.10.000327
ORF1ab/nsp742A42VgCtgTt11B.1.1.2320.001815
ORF1ab/nsp742A42VgCtgTt11B.1.1.2400.004695
ORF1ab/nsp742A42VgCtgTt11B.1.1.3170.000412
ORF1ab/nsp742A42VgCtgTt11B.1.1.330.000421
ORF1ab/nsp742A42VgCtgTt11B.1.160.300.002976
ORF1ab/nsp742A42VgCtgTt11B.1.1770.000013
ORF1ab/nsp742A42VgCtgTt11B.1.177.420.000894
ORF1ab/nsp742A42VgCtgTt11B.1.177.540.000606
ORF1ab/nsp742A42VgCtgTt11B.1.2230.002778
ORF1ab/nsp742A42VgCtgTt11B.1.230.006061
ORF1ab/nsp742A42VgCtgTt11B.1.2580.000067
ORF1ab/nsp742A42VgCtgTt11B.1.258.170.000104
ORF1ab/nsp742A42VgCtgTt11B.1.36.170.000494
ORF1ab/nsp742A42VgCtgTt11B.1.36.390.002217
ORF1ab/nsp742A42VgCtgTt11B.1.3660.004878
ORF1ab/nsp742A42VgCtgTt11B.1.3670.000792
ORF1ab/nsp742A42VgCtgTt11B.1.3690.000285
ORF1ab/nsp742A42VgCtgTt11B.1.438.10.000107
ORF1ab/nsp742A42VgCtgTt11B.1.6230.000536
ORF1ab/nsp742A42VgCtgTt11B.1.6370.000073
ORF1ab/nsp742A42VgCtgTt11B.230.002924
ORF1ab/nsp742A42VgCtgTt11B.6.60.000889
ORF1ab/nsp742A42VgCtgTt11C.36.30.000567