CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp7 : CodonNum = 25 & Codon = tcG

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp725S25SS3884SsyntcAtcG3142650.84394911915-11917

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp725S25StcAtcG265314All0.000051
ORF1ab/nsp725S25StcAtcG4848B.1.1.2140.002662
ORF1ab/nsp725S25StcAtcG3234AY.40.00005
ORF1ab/nsp725S25StcAtcG3234B.1.1.70.000029
ORF1ab/nsp725S25StcAtcG1416B.1.617.20.000053
ORF1ab/nsp725S25StcAtcG1313AY.1210.001759
ORF1ab/nsp725S25StcAtcG99AY.1030.000056
ORF1ab/nsp725S25StcAtcG99B.1.4290.000212
ORF1ab/nsp725S25StcAtcG88AY.430.000035
ORF1ab/nsp725S25StcAtcG77B.1.1.3180.002112
ORF1ab/nsp725S25StcAtcG36AY.250.000018
ORF1ab/nsp725S25StcAtcG56AY.30.00005
ORF1ab/nsp725S25StcAtcG66AY.9.10.000502
ORF1ab/nsp725S25StcAtcG55AY.1190.000177
ORF1ab/nsp725S25StcAtcG55AY.80.00303
ORF1ab/nsp725S25StcAtcG55B.1.1600.000156
ORF1ab/nsp725S25StcAtcG55B.1.6210.000443
ORF1ab/nsp725S25StcAtcG44AY.300.001583
ORF1ab/nsp725S25StcAtcG34B.10.000027
ORF1ab/nsp725S25StcAtcG44B.1.1.1630.030534
ORF1ab/nsp725S25StcAtcG44B.1.4620.028986
ORF1ab/nsp725S25StcAtcG34P.10.000047
ORF1ab/nsp725S25StcAtcG33AY.440.000018
ORF1ab/nsp725S25StcAtcG23B.1.20.000018
ORF1ab/nsp725S25StcAtcG33P.1.150.000697
ORF1ab/nsp725S25StcAtcG22AY.1000.000092
ORF1ab/nsp725S25StcAtcG12AY.4.20.000022
ORF1ab/nsp725S25StcAtcG12B.1.10.000018
ORF1ab/nsp725S25StcAtcG22B.1.1.1590.009346
ORF1ab/nsp725S25StcAtcG11AY.100.00053
ORF1ab/nsp725S25StcAtcG11AY.1100.000113
ORF1ab/nsp725S25StcAtcG11AY.1130.000142
ORF1ab/nsp725S25StcAtcG11AY.1170.000085
ORF1ab/nsp725S25StcAtcG11AY.1200.000037
ORF1ab/nsp725S25StcAtcG11AY.200.000039
ORF1ab/nsp725S25StcAtcG11AY.260.000028
ORF1ab/nsp725S25StcAtcG11AY.3.10.000085
ORF1ab/nsp725S25StcAtcG11AY.330.000067
ORF1ab/nsp725S25StcAtcG11AY.39.10.00004
ORF1ab/nsp725S25StcAtcG11AY.450.000122
ORF1ab/nsp725S25StcAtcG11AY.470.000031
ORF1ab/nsp725S25StcAtcG11AY.540.000095
ORF1ab/nsp725S25StcAtcG11AY.730.000665
ORF1ab/nsp725S25StcAtcG11AY.840.000437
ORF1ab/nsp725S25StcAtcG11AY.920.000287
ORF1ab/nsp725S25StcAtcG11B.1.1.2630.001558
ORF1ab/nsp725S25StcAtcG11B.1.1.3060.000438
ORF1ab/nsp725S25StcAtcG11B.1.2430.00007
ORF1ab/nsp725S25StcAtcG11B.1.2580.000067
ORF1ab/nsp725S25StcAtcG11B.1.3230.020833
ORF1ab/nsp725S25StcAtcG11B.1.3510.00003
ORF1ab/nsp725S25StcAtcG11B.1.36.220.001208
ORF1ab/nsp725S25StcAtcG11B.1.4270.00005
ORF1ab/nsp725S25StcAtcG11B.1.5250.000113
ORF1ab/nsp725S25StcAtcG11P.1.140.000048
ORF1ab/nsp725S25StcAtcG11P.30.001595