CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp7 : CodonNum = 25 & Codon = Cca

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp725S25PS3884PnonsynTcaCca1212111915-11917

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp725S25PTcaCca1212All0.000002
ORF1ab/nsp725S25PTcaCca220.111111
ORF1ab/nsp725S25PTcaCca22AY.40.000003
ORF1ab/nsp725S25PTcaCca22B.1.6370.000146
ORF1ab/nsp725S25PTcaCca11AY.430.000004
ORF1ab/nsp725S25PTcaCca11AY.440.000006
ORF1ab/nsp725S25PTcaCca11B.1.1.70.000001
ORF1ab/nsp725S25PTcaCca11B.1.20.000009
ORF1ab/nsp725S25PTcaCca11B.1.4270.00005
ORF1ab/nsp725S25PTcaCca11B.1.6210.000089