CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : Mut = Y242X

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp6242Y242XY3811XnonsyntaTtaG1360.46153811696-11698
ORF1ab/nsp6242Y242XY3811XnonsyntaTtaA1350.38461511696-11698
ORF1ab/nsp6242Y242XY3811XnonsyntATtGA1320.15384611696-11698

Details of the mutation Y242X within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp6242Y242XtaTtaG613All0.000001
ORF1ab/nsp6242Y242XtaTtaA513All0.000001
ORF1ab/nsp6242Y242XtATtGA213All0
ORF1ab/nsp6242Y242XtaTtaG13P.10.000016
ORF1ab/nsp6242Y242XtaTtaA13P.10.000016
ORF1ab/nsp6242Y242XtATtGA13P.10.000016
ORF1ab/nsp6242Y242XtaTtaA12B.10.000009
ORF1ab/nsp6242Y242XtaTtaG12B.10.000009
ORF1ab/nsp6242Y242XtaTtaA12B.1.10.000018
ORF1ab/nsp6242Y242XtATtGA12B.1.10.000018
ORF1ab/nsp6242Y242XtaTtaA11AY.440.000006
ORF1ab/nsp6242Y242XtaTtaA11B.1.1.390.00051
ORF1ab/nsp6242Y242XtaTtaG11B.1.1.500.000679
ORF1ab/nsp6242Y242XtaTtaG11B.1.1.70.000001
ORF1ab/nsp6242Y242XtaTtaG11P.20.000187
ORF1ab/nsp6242Y242XtaTtaG11P.70.004367