CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : Mut = Y242C

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp6242Y242CY3811CnonsyntAttGt22170.77272711696-11698
ORF1ab/nsp6242Y242CY3811CnonsyntATtGC2250.22727311696-11698

Details of the mutation Y242C within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp6242Y242CtAttGt1722All0.000003
ORF1ab/nsp6242Y242CtATtGC522All0.000001
ORF1ab/nsp6242Y242CtATtGC480.222222
ORF1ab/nsp6242Y242CtAttGt480.222222
ORF1ab/nsp6242Y242CtAttGt22B.10.000018
ORF1ab/nsp6242Y242CtAttGt11AY.290.000016
ORF1ab/nsp6242Y242CtATtGC11AY.440.000006
ORF1ab/nsp6242Y242CtAttGt11B.1.1.2410.00207
ORF1ab/nsp6242Y242CtAttGt11B.1.1.5260.003546
ORF1ab/nsp6242Y242CtAttGt11B.1.1.70.000001
ORF1ab/nsp6242Y242CtAttGt11B.1.1770.000013
ORF1ab/nsp6242Y242CtAttGt11B.1.177.70.000165
ORF1ab/nsp6242Y242CtAttGt11B.1.4270.00005
ORF1ab/nsp6242Y242CtAttGt11B.1.617.20.000004
ORF1ab/nsp6242Y242CtAttGt11P.10.000016
ORF1ab/nsp6242Y242CtAttGt11P.20.000187
ORF1ab/nsp6242Y242CtAttGt11P.70.004367