CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : Mut = Y234T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp6234Y234TY3803TnonsynTACACT44190.43181811672-11674
ORF1ab/nsp6234Y234TY3803TnonsynTAcACc44100.22727311672-11674
ORF1ab/nsp6234Y234TY3803TnonsynTACACA44100.22727311672-11674
ORF1ab/nsp6234Y234TY3803TnonsynTACACG4450.11363611672-11674

Details of the mutation Y234T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp6234Y234TTACACT1944All0.000004
ORF1ab/nsp6234Y234TTAcACc1044All0.000002
ORF1ab/nsp6234Y234TTACACA1044All0.000002
ORF1ab/nsp6234Y234TTACACG544All0.000001
ORF1ab/nsp6234Y234TTACACT918B.1.1.70.000008
ORF1ab/nsp6234Y234TTACACA518B.1.1.70.000004
ORF1ab/nsp6234Y234TTACACG318B.1.1.70.000003
ORF1ab/nsp6234Y234TTAcACc118B.1.1.70.000001
ORF1ab/nsp6234Y234TTACACT514B.10.000046
ORF1ab/nsp6234Y234TTAcACc514B.10.000046
ORF1ab/nsp6234Y234TTACACA314B.10.000027
ORF1ab/nsp6234Y234TTACACG114B.10.000009
ORF1ab/nsp6234Y234TTACACT13B.1.1600.000031
ORF1ab/nsp6234Y234TTACACA13B.1.1600.000031
ORF1ab/nsp6234Y234TTAcACc13B.1.1600.000031
ORF1ab/nsp6234Y234TTACACT13B.1.177.500.004695
ORF1ab/nsp6234Y234TTACACG13B.1.177.500.004695
ORF1ab/nsp6234Y234TTACACA13B.1.177.500.004695
ORF1ab/nsp6234Y234TTAcACc12B.1.10.000018
ORF1ab/nsp6234Y234TTACACT12B.1.10.000018
ORF1ab/nsp6234Y234TTACACT12B.1.1.10.000327
ORF1ab/nsp6234Y234TTAcACc12B.1.1.10.000327
ORF1ab/nsp6234Y234TTAcACc12B.1.1770.000013
ORF1ab/nsp6234Y234TTACACT12B.1.1770.000013