CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : Mut = Y234L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp6234Y234LY3803LnonsynTACCTT189520.27513211672-11674
ORF1ab/nsp6234Y234LY3803LnonsyntACtTA189450.23809511672-11674
ORF1ab/nsp6234Y234LY3803LnonsynTAcCTc189430.22751311672-11674
ORF1ab/nsp6234Y234LY3803LnonsyntACtTG189240.12698411672-11674
ORF1ab/nsp6234Y234LY3803LnonsynTACCTA189180.095238111672-11674
ORF1ab/nsp6234Y234LY3803LnonsynTACCTG18970.03703711672-11674

Details of the mutation Y234L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp6234Y234LTACCTT52189All0.00001
ORF1ab/nsp6234Y234LtACtTA45189All0.000009
ORF1ab/nsp6234Y234LTAcCTc43189All0.000008
ORF1ab/nsp6234Y234LtACtTG24189All0.000005
ORF1ab/nsp6234Y234LTACCTA18189All0.000003
ORF1ab/nsp6234Y234LTACCTG7189All0.000001
ORF1ab/nsp6234Y234LTAcCTc2873B.10.000256
ORF1ab/nsp6234Y234LTACCTT2573B.10.000229
ORF1ab/nsp6234Y234LtACtTA973B.10.000082
ORF1ab/nsp6234Y234LTACCTA773B.10.000064
ORF1ab/nsp6234Y234LtACtTG373B.10.000027
ORF1ab/nsp6234Y234LTACCTG173B.10.000009
ORF1ab/nsp6234Y234LtACtTA3271B.1.1.70.000029
ORF1ab/nsp6234Y234LtACtTG1671B.1.1.70.000014
ORF1ab/nsp6234Y234LTACCTT1171B.1.1.70.00001
ORF1ab/nsp6234Y234LTACCTA771B.1.1.70.000006
ORF1ab/nsp6234Y234LTACCTG371B.1.1.70.000003
ORF1ab/nsp6234Y234LTAcCTc271B.1.1.70.000002
ORF1ab/nsp6234Y234LTAcCTc380.166667
ORF1ab/nsp6234Y234LTACCTT380.166667
ORF1ab/nsp6234Y234LtACtTG280.111111
ORF1ab/nsp6234Y234LTAcCTc35B.1.1770.00004
ORF1ab/nsp6234Y234LTACCTT25B.1.1770.000026
ORF1ab/nsp6234Y234LTACCTT15B.1.177.500.004695
ORF1ab/nsp6234Y234LtACtTA15B.1.177.500.004695
ORF1ab/nsp6234Y234LTACCTA15B.1.177.500.004695
ORF1ab/nsp6234Y234LtACtTG15B.1.177.500.004695
ORF1ab/nsp6234Y234LTACCTG15B.1.177.500.004695
ORF1ab/nsp6234Y234LTACCTA14B.1.1600.000031
ORF1ab/nsp6234Y234LtACtTA14B.1.1600.000031
ORF1ab/nsp6234Y234LTAcCTc14B.1.1600.000031
ORF1ab/nsp6234Y234LTACCTT14B.1.1600.000031
ORF1ab/nsp6234Y234LTAcCTc14B.1.5250.000113
ORF1ab/nsp6234Y234LTACCTT14B.1.5250.000113
ORF1ab/nsp6234Y234LTACCTG14B.1.5250.000113
ORF1ab/nsp6234Y234LtACtTG14B.1.5250.000113
ORF1ab/nsp6234Y234LTACCTT13AY.250.000006
ORF1ab/nsp6234Y234LTACCTA13AY.250.000006
ORF1ab/nsp6234Y234LtACtTA13AY.250.000006
ORF1ab/nsp6234Y234LTACCTT13B.1.5760.000907
ORF1ab/nsp6234Y234LtACtTG13B.1.5760.000907
ORF1ab/nsp6234Y234LTACCTG13B.1.5760.000907
ORF1ab/nsp6234Y234LtACtTA13P.10.000016
ORF1ab/nsp6234Y234LTACCTA13P.10.000016
ORF1ab/nsp6234Y234LTACCTT13P.10.000016
ORF1ab/nsp6234Y234LTAcCTc12B.1.1.10.000327
ORF1ab/nsp6234Y234LTACCTT12B.1.1.10.000327
ORF1ab/nsp6234Y234LTACCTT12B.1.2210.000071
ORF1ab/nsp6234Y234LTAcCTc12B.1.2210.000071
ORF1ab/nsp6234Y234LTACCTT12B.1.2580.000067
ORF1ab/nsp6234Y234LTAcCTc12B.1.2580.000067
ORF1ab/nsp6234Y234LTAcCTc12B.1.4170.028571
ORF1ab/nsp6234Y234LTACCTT12B.1.4170.028571
ORF1ab/nsp6234Y234LTACCTT12B.1.90.006173
ORF1ab/nsp6234Y234LTAcCTc12B.1.90.006173