CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp6 | 60 | V60V | V3629V | syn | gtC | gtT | 4895 | 4808 | 0.982227 | 11150-11152 |
ORF1ab/nsp6 | 60 | V60V | V3629V | syn | gtC | gtA | 4895 | 81 | 0.0165475 | 11150-11152 |
ORF1ab/nsp6 | 60 | V60V | V3629V | syn | gtC | gtG | 4895 | 6 | 0.00122574 | 11150-11152 |
Details of the mutation V60V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 4808 | 4895 | All | 0.00092 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 81 | 4895 | All | 0.000015 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtG | 6 | 4895 | All | 0.000001 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 741 | 741 | B.1.177.32 | 1 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 555 | 567 | B.1.1.7 | 0.000497 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 7 | 567 | B.1.1.7 | 0.000006 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtG | 5 | 567 | B.1.1.7 | 0.000004 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 406 | 406 | AY.116 | 0.116432 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 322 | 324 | B.1.2 | 0.002835 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 2 | 324 | B.1.2 | 0.000018 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 301 | 302 | AY.25 | 0.00181 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 1 | 302 | AY.25 | 0.000006 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 265 | 266 | AY.20 | 0.010299 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 1 | 266 | AY.20 | 0.000039 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 201 | 208 | B.1.617.2 | 0.000757 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 7 | 208 | B.1.617.2 | 0.000026 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 143 | 143 | B.1.177.26 | 1 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 127 | 133 | B.1 | 0.001163 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 5 | 133 | B.1 | 0.000046 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtG | 1 | 133 | B.1 | 0.000009 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 113 | 120 | AY.4 | 0.000176 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 7 | 120 | AY.4 | 0.000011 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 108 | 113 | AY.43 | 0.000478 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 5 | 113 | AY.43 | 0.000022 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 101 | 102 | B.1.177 | 0.00133 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 1 | 102 | B.1.177 | 0.000013 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 85 | 85 | AY.3 | 0.000845 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 64 | 64 | Q.7 | 0.071111 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 60 | 60 | P.1 | 0.000945 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 58 | 58 | P.5 | 0.794521 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 56 | 56 | B.1.429 | 0.001318 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 49 | 49 | B.1.1.255 | 0.148485 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 45 | 45 | AY.44 | 0.000274 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 40 | 43 | AY.42 | 0.001609 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 3 | 43 | AY.42 | 0.000121 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 36 | 36 | B.1.160 | 0.001123 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 35 | 35 | AY.118 | 0.002193 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 35 | 35 | AY.26 | 0.000991 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 35 | 35 | B.1.466.2 | 0.013693 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 31 | 31 | AA.3 | 0.837838 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 31 | 31 | B.1.334 | 0.563636 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 29 | 30 | B.1.243 | 0.002018 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 1 | 30 | B.1.243 | 0.00007 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 29 | 29 | AY.102 | 0.000769 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 28 | 28 | B.1.1 | 0.000508 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 26 | 26 | AY.103 | 0.000161 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 26 | 26 | B.1.621 | 0.002301 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 17 | 18 | AY.33 | 0.001135 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 1 | 18 | AY.33 | 0.000067 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 18 | 18 | B.1.526 | 0.000423 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 17 | 17 | B.1.351 | 0.000505 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 16 | 16 | AY.39 | 0.000395 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 15 | 15 | AY.100 | 0.00069 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 15 | 15 | B.1.160.16 | 0.013941 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 11 | 12 | AY.5 | 0.000227 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 1 | 12 | AY.5 | 0.000021 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 7 | 12 | AY.98 | 0.000553 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 5 | 12 | AY.98 | 0.000395 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 12 | 12 | B.1.318 | 0.461538 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 11 | 11 | AZ.2 | 0.009031 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 11 | 11 | B.1.221 | 0.000781 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 11 | 11 | B.1.258 | 0.000732 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 11 | 11 | B.1.258.17 | 0.001144 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 10 | 10 | AY.30 | 0.003957 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 10 | 10 | AY.38 | 0.004993 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 9 | 10 | AY.4.2 | 0.000195 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 1 | 10 | AY.4.2 | 0.000022 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 7 | 10 | B.1.427 | 0.000353 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 3 | 10 | B.1.427 | 0.000151 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 10 | 10 | B.1.617.1 | 0.00129 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 9 | 9 | AY.16 | 0.003417 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 8 | 9 | AY.29 | 0.000126 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 1 | 9 | AY.29 | 0.000016 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 8 | 9 | B.1.36 | 0.001167 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 1 | 9 | B.1.36 | 0.000146 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 6 | 9 | D.2 | 0.00045 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 3 | 9 | D.2 | 0.000225 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 8 | 8 | AY.119 | 0.000282 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 7 | 8 | B.1.596 | 0.00061 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 1 | 8 | B.1.596 | 0.000087 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 8 | 8 | C.37 | 0.000929 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 7 | 7 | AY.117 | 0.000592 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 7 | 7 | R.1 | 0.00063 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 6 | 6 | A.2.5 | 0.002994 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 6 | 6 | AY.113 | 0.000854 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 5 | 6 | AY.121 | 0.000677 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 1 | 6 | AY.121 | 0.000135 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 5 | 6 | AY.75 | 0.00028 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 1 | 6 | AY.75 | 0.000056 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 6 | 6 | B.1.160.15 | 0.029703 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 6 | 6 | B.1.177.27 | 0.056604 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 6 | 6 | B.1.609 | 0.002876 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 6 | 6 | C.29 | 0.375 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 4 | 6 | P.1.14 | 0.000191 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 2 | 6 | P.1.14 | 0.000096 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 5 | 5 | AY.120 | 0.000186 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 5 | 5 | AY.46 | 0.00052 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 5 | 5 | AY.6 | 0.000206 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 5 | 5 | AY.9.1 | 0.000419 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 5 | 5 | AY.9.2 | 0.000184 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 4 | 5 | B | 0.000511 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 1 | 5 | B | 0.000128 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 5 | 5 | B.1.1.519 | 0.000199 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 5 | 5 | B.1.177.4 | 0.001055 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 5 | 5 | B.1.240 | 0.001078 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 4 | 5 | B.1.595 | 0.001044 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 1 | 5 | B.1.595 | 0.000261 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 4 | 4 | AY.23 | 0.000279 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 4 | 4 | AY.47 | 0.000124 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 4 | 4 | AY.54 | 0.000381 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 4 | 4 | B.1.1.222 | 0.000816 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 4 | 4 | B.1.177.21 | 0.000306 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 4 | 4 | B.1.366 | 0.019512 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 4 | 4 | B.1.525 | 0.000453 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 4 | 4 | B.1.619 | 0.003484 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 4 | 4 | P.1.10 | 0.001078 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 4 | 4 | P.1.7 | 0.001277 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 2 | 3 | AY.39.1 | 0.000079 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 1 | 3 | AY.39.1 | 0.00004 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 3 | 3 | AY.46.6 | 0.000217 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 3 | 3 | AY.9 | 0.000203 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 3 | 3 | AY.98.1 | 0.000145 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 3 | 3 | B.1.1.214 | 0.000166 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 3 | 3 | B.1.1.225 | 0.021583 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 3 | 3 | B.1.1.269 | 0.00406 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 3 | 3 | B.1.1.28 | 0.000934 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 3 | 3 | B.1.1.306 | 0.001315 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 3 | 3 | B.1.1.397 | 0.006757 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 3 | 3 | B.1.1.416 | 0.002715 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 3 | 3 | B.1.126 | 0.003827 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 3 | 3 | B.1.177.57 | 0.000843 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 3 | 3 | B.1.36.31 | 0.005254 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 3 | 3 | B.1.561 | 0.001191 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 3 | 3 | B.1.582 | 0.001472 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 3 | 3 | B.1.9.4 | 0.018405 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 3 | 3 | C.16 | 0.003181 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 3 | 3 | P.1.15 | 0.000697 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 2 | A | 0.000387 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 1 | 2 | A | 0.000387 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 2 | AY.14 | 0.000088 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 1 | 2 | AY.14 | 0.000088 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 2 | 2 | AY.2 | 0.000712 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 2 | 2 | AY.3.1 | 0.000171 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 2 | 2 | AY.46.1 | 0.002053 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 2 | 2 | AY.48 | 0.00093 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 2 | AY.52 | 0.000814 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 1 | 2 | AY.52 | 0.000814 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 2 | 2 | AY.59 | 0.001059 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 2 | 2 | AY.61 | 0.00021 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 2 | 2 | AY.74 | 0.000231 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 2 | 2 | AY.84 | 0.000875 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 2 | 2 | AY.99 | 0.002099 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 2 | 2 | B.1.1.284 | 0.000215 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 2 | 2 | B.1.1.291 | 0.001485 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 2 | 2 | B.1.1.317 | 0.000823 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 2 | 2 | B.1.1.376 | 0.011905 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 2 | 2 | B.1.1.437 | 0.020833 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 2 | 2 | B.1.177.44 | 0.001038 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 2 | 2 | B.1.214.2 | 0.001199 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 2 | 2 | B.1.232 | 0.001075 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 2 | 2 | B.1.36.18 | 0.00084 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 2 | 2 | B.1.438.1 | 0.000215 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 2 | 2 | B.1.459 | 0.008163 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 2 | 2 | B.1.620 | 0.001892 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 2 | 2 | B.1.621.1 | 0.001012 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 2 | 2 | B.1.8 | 0.003945 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 2 | 2 | Q.1 | 0.000253 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | A.23.1 | 0.000704 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 1 | 1 | AS.1 | 0.009524 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AU.3 | 0.00211 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AY.5.4 | 0.000277 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AY.72 | 0.001361 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 1 | 1 | AY.77 | 0.001127 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AY.79 | 0.001211 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | AZ.1 | 0.000867 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.1.10 | 0.001115 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.1.174 | 0.003378 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.1.180 | 0.010753 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.1.192 | 0.002309 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.1.307 | 0.002532 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.1.311 | 0.000358 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.1.381 | 0.04 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.1.51 | 0.001718 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.1.517 | 0.006803 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.1.54 | 0.003021 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.131 | 0.008772 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.153 | 0.018868 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.160.33 | 0.004425 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.160.7 | 0.002079 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.169 | 0.014925 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.177.15 | 0.000631 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.177.17 | 0.000821 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.177.19 | 0.001431 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.177.54 | 0.000606 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.177.87 | 0.000728 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.222 | 0.001692 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.237 | 0.004975 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.241 | 0.000812 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.258.7 | 0.001912 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.282 | 0.014925 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 1 | 1 | B.1.301 | 0.005917 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.306 | 0.005714 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.338 | 0.008621 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.36.17 | 0.000494 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.36.22 | 0.001208 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.396 | 0.000706 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 1 | 1 | B.1.400 | 0.000429 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.404 | 0.001302 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 1 | 1 | B.1.416.1 | 0.001563 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.441 | 0.009615 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.456 | 0.003268 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.465 | 0.003802 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.470 | 0.001404 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.499 | 0.00105 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.517 | 0.000427 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.565 | 0.00081 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.568 | 0.001111 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.575.1 | 0.002439 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.580 | 0.004065 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.581 | 0.009434 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.588 | 0.00091 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.595.2 | 0.04 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.70 | 0.02439 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.84 | 0.020833 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | B.1.93 | 0.000934 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtA | 1 | 1 | B.6.6 | 0.000889 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | C.1.2 | 0.004255 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | C.36.3 | 0.000567 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | N.4 | 0.004255 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | P.1.10.1 | 0.00813 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | P.1.2 | 0.001156 |
ORF1ab/nsp6 | 60 | V60V | gtC | gtT | 1 | 1 | W.1 | 0.008696 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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