CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : Mut = V26A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp626V26AV3595AnonsyngTcgCc1201160.96666711048-11050
ORF1ab/nsp626V26AV3595AnonsyngTCgCA12020.016666711048-11050
ORF1ab/nsp626V26AV3595AnonsyngTCgCT12020.016666711048-11050

Details of the mutation V26A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp626V26AgTcgCc116120All0.000022
ORF1ab/nsp626V26AgTCgCT2120All0
ORF1ab/nsp626V26AgTCgCA2120All0
ORF1ab/nsp626V26AgTcgCc5555B.1.1.70.000049
ORF1ab/nsp626V26AgTcgCc99AY.40.000014
ORF1ab/nsp626V26AgTcgCc88AY.440.000049
ORF1ab/nsp626V26AgTcgCc260.111111
ORF1ab/nsp626V26AgTCgCA260.111111
ORF1ab/nsp626V26AgTCgCT260.111111
ORF1ab/nsp626V26AgTcgCc55AY.290.000079
ORF1ab/nsp626V26AgTcgCc44AY.1020.000106
ORF1ab/nsp626V26AgTcgCc44B.1.617.20.000015
ORF1ab/nsp626V26AgTcgCc44Q.80.00066
ORF1ab/nsp626V26AgTcgCc33AY.330.0002
ORF1ab/nsp626V26AgTcgCc33AY.450.000365
ORF1ab/nsp626V26AgTcgCc33B.1.10.000054
ORF1ab/nsp626V26AgTcgCc22AY.1030.000012
ORF1ab/nsp626V26AgTcgCc22AY.30.00002
ORF1ab/nsp626V26AgTcgCc22AY.390.000049
ORF1ab/nsp626V26AgTcgCc11AY.100.00053
ORF1ab/nsp626V26AgTcgCc11AY.750.000056
ORF1ab/nsp626V26AgTcgCc11B0.000128
ORF1ab/nsp626V26AgTcgCc11B.1.1.2580.003257
ORF1ab/nsp626V26AgTcgCc11B.1.1770.000013
ORF1ab/nsp626V26AgTcgCc11B.1.177.70.000165
ORF1ab/nsp626V26AgTcgCc11B.1.20.000009
ORF1ab/nsp626V26AgTcgCc11B.1.258.170.000104
ORF1ab/nsp626V26AgTcgCc11B.1.4270.00005
ORF1ab/nsp626V26AgTcgCc11D.20.000075