CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : Mut = V149A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp6149V149AV3718AnonsyngTtgCt2961002960850.99994911417-11419
ORF1ab/nsp6149V149AV3718AnonsyngTTgCC296100110.000037149611417-11419
ORF1ab/nsp6149V149AV3718AnonsyngTTgCG29610030.000010131711417-11419
ORF1ab/nsp6149V149AV3718AnonsyngTTgCA29610010.0000033772411417-11419

Details of the mutation V149A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp6149V149AgTtgCt296085296100All0.05663
ORF1ab/nsp6149V149AgTTgCC11296100All0.000002
ORF1ab/nsp6149V149AgTTgCG3296100All0.000001
ORF1ab/nsp6149V149AgTTgCA1296100All0
ORF1ab/nsp6149V149AgTtgCt3502335023AY.260.991507
ORF1ab/nsp6149V149AgTtgCt3108431090AY.470.966873
ORF1ab/nsp6149V149AgTTgCC631090AY.470.000187
ORF1ab/nsp6149V149AgTtgCt2963129637B.1.617.20.111573
ORF1ab/nsp6149V149AgTTgCG329637B.1.617.20.000011
ORF1ab/nsp6149V149AgTTgCC229637B.1.617.20.000008
ORF1ab/nsp6149V149AgTTgCA129637B.1.617.20.000004
ORF1ab/nsp6149V149AgTtgCt2336923369AY.9.20.858334
ORF1ab/nsp6149V149AgTtgCt1676616766AY.750.939272
ORF1ab/nsp6149V149AgTtgCt1543115431AY.270.998706
ORF1ab/nsp6149V149AgTtgCt1460914609AY.90.987495
ORF1ab/nsp6149V149AgTtgCt1189711897AY.9.10.996065
ORF1ab/nsp6149V149AgTtgCt1124611246AY.140.989791
ORF1ab/nsp6149V149AgTtgCt1004110041AY.540.95738
ORF1ab/nsp6149V149AgTtgCt94289429AY.610.987846
ORF1ab/nsp6149V149AgTTgCC19429AY.610.000105
ORF1ab/nsp6149V149AgTtgCt82278227AY.740.951428
ORF1ab/nsp6149V149AgTtgCt58985898AY.130.949453
ORF1ab/nsp6149V149AgTtgCt51795179AY.75.10.933826
ORF1ab/nsp6149V149AgTtgCt51705170AY.690.965092
ORF1ab/nsp6149V149AgTtgCt46774677AY.700.975188
ORF1ab/nsp6149V149AgTtgCt32423242AY.530.932145
ORF1ab/nsp6149V149AgTtgCt29782978AY.370.941214
ORF1ab/nsp6149V149AgTtgCt29602960AY.680.810293
ORF1ab/nsp6149V149AgTtgCt28012801AY.20.997507
ORF1ab/nsp6149V149AgTtgCt24742474AY.160.939256
ORF1ab/nsp6149V149AgTtgCt24572457AY.300.972299
ORF1ab/nsp6149V149AgTtgCt24552455AY.630.94971
ORF1ab/nsp6149V149AgTtgCt22632263AY.240.975431
ORF1ab/nsp6149V149AgTtgCt20952095AY.620.912854
ORF1ab/nsp6149V149AgTtgCt20022002AY.710.951069
ORF1ab/nsp6149V149AgTtgCt19691969AY.670.914113
ORF1ab/nsp6149V149AgTtgCt17821782AY.650.949893
ORF1ab/nsp6149V149AgTtgCt17201720AY.380.858712
ORF1ab/nsp6149V149AgTtgCt17131713AY.100.90779
ORF1ab/nsp6149V149AgTtgCt16151615AY.80.978788
ORF1ab/nsp6149V149AgTtgCt15111511AY.590.800318
ORF1ab/nsp6149V149AgTtgCt15031503AY.640.894643
ORF1ab/nsp6149V149AgTtgCt14301430AY.16.10.671992
ORF1ab/nsp6149V149AgTtgCt14141414AY.570.927822
ORF1ab/nsp6149V149AgTtgCt12111211AY.500.968026
ORF1ab/nsp6149V149AgTtgCt10741074AY.510.976364
ORF1ab/nsp6149V149AgTtgCt998998AY.600.93621
ORF1ab/nsp6149V149AgTtgCt927927AY.400.893925
ORF1ab/nsp6149V149AgTtgCt920920AY.520.749186
ORF1ab/nsp6149V149AgTtgCt886886AY.730.589488
ORF1ab/nsp6149V149AgTtgCt877877AY.660.937968
ORF1ab/nsp6149V149AgTtgCt798798AY.580.724138
ORF1ab/nsp6149V149AgTtgCt726726AY.430.003217
ORF1ab/nsp6149V149AgTtgCt718718AY.720.976871
ORF1ab/nsp6149V149AgTtgCt696696AY.440.004236
ORF1ab/nsp6149V149AgTtgCt684684AY.110.915663
ORF1ab/nsp6149V149AgTtgCt626626B.10.005734
ORF1ab/nsp6149V149AgTtgCt617617AY.550.566055
ORF1ab/nsp6149V149AgTtgCt549549AY.190.625998
ORF1ab/nsp6149V149AgTtgCt506506AY.9.2.11
ORF1ab/nsp6149V149AgTtgCt498498AY.280.941399
ORF1ab/nsp6149V149AgTtgCt465465AY.560.746388
ORF1ab/nsp6149V149AgTtgCt446446AY.150.991111
ORF1ab/nsp6149V149AgTtgCt292292AY.480.135814
ORF1ab/nsp6149V149AgTtgCt276276AY.490.881789
ORF1ab/nsp6149V149AgTtgCt253253AY.390.006252
ORF1ab/nsp6149V149AgTtgCt154154AY.250.000926
ORF1ab/nsp6149V149AgTtgCt148149AY.1030.000919
ORF1ab/nsp6149V149AgTTgCC1149AY.1030.000006
ORF1ab/nsp6149V149AgTtgCt132132AY.200.00513
ORF1ab/nsp6149V149AgTtgCt110110AY.1170.009297
ORF1ab/nsp6149V149AgTtgCt109109AY.980.00861
ORF1ab/nsp6149V149AgTtgCt103103AY.1100.011607
ORF1ab/nsp6149V149AgTtgCt9696AY.180.969697
ORF1ab/nsp6149V149AgTtgCt9090AY.170.737705
ORF1ab/nsp6149V149AgTtgCt8383AY.1130.011818
ORF1ab/nsp6149V149AgTtgCt8282AY.1050.052733
ORF1ab/nsp6149V149AgTtgCt7474AY.450.009005
ORF1ab/nsp6149V149AgTtgCt5353AY.210.100569
ORF1ab/nsp6149V149AgTtgCt5353AY.310.981481
ORF1ab/nsp6149V149AgTtgCt5353B.1.10.000961
ORF1ab/nsp6149V149AgTtgCt5050AY.98.10.002422
ORF1ab/nsp6149V149AgTtgCt4747AY.30.000467
ORF1ab/nsp6149V149AgTtgCt4545AY.120.20.057841
ORF1ab/nsp6149V149AgTtgCt4444AY.1180.002757
ORF1ab/nsp6149V149AgTtgCt4444AY.1210.005954
ORF1ab/nsp6149V149AgTtgCt4343AY.230.002999
ORF1ab/nsp6149V149AgTtgCt4343AY.320.022897
ORF1ab/nsp6149V149AgTtgCt4343B0.005496
ORF1ab/nsp6149V149AgTtgCt4343B.1.6090.020614
ORF1ab/nsp6149V149AgTtgCt4040AY.860.033195
ORF1ab/nsp6149V149AgTtgCt4040B.1.36.290.020693
ORF1ab/nsp6149V149AgTtgCt3939AY.330.002604
ORF1ab/nsp6149V149AgTtgCt3838AY.770.042841
ORF1ab/nsp6149V149AgTtgCt3838AY.930.010377
ORF1ab/nsp6149V149AgTtgCt3737AY.46.20.023507
ORF1ab/nsp6149V149AgTtgCt3535AY.4.2.10.005215
ORF1ab/nsp6149V149AgTtgCt3232AY.1000.001472
ORF1ab/nsp6149V149AgTtgCt3030B.1.1770.000395
ORF1ab/nsp6149V149AgTtgCt3030N.100.882353
ORF1ab/nsp6149V149AgTtgCt2929B.1.20.000255
ORF1ab/nsp6149V149AgTtgCt2727AY.460.00281
ORF1ab/nsp6149V149AgTtgCt2626AY.39.10.00103
ORF1ab/nsp6149V149AgTtgCt2525AY.5.30.008435
ORF1ab/nsp6149V149AgTtgCt2525AY.5.40.006918
ORF1ab/nsp6149V149AgTtgCt2323B.1.5760.020852
ORF1ab/nsp6149V149AgTtgCt2323C.360.020947
ORF1ab/nsp6149V149AgTtgCt2020AY.1020.00053
ORF1ab/nsp6149V149AgTtgCt2020AY.350.004661
ORF1ab/nsp6149V149AgTtgCt2020AY.780.030817
ORF1ab/nsp6149V149AgTtgCt2020B.1.1.2160.017809
ORF1ab/nsp6149V149AgTtgCt1919AY.1140.004391
ORF1ab/nsp6149V149AgTtgCt1919AY.1190.000671
ORF1ab/nsp6149V149AgTtgCt1919AY.420.000764
ORF1ab/nsp6149V149AgTtgCt1818AY.10.007123
ORF1ab/nsp6149V149AgTtgCt1818AY.410.005291
ORF1ab/nsp6149V149AgTtgCt1818AY.880.015915
ORF1ab/nsp6149V149AgTtgCt1717AY.40.000026
ORF1ab/nsp6149V149AgTtgCt1717AY.50.000351
ORF1ab/nsp6149V149AgTtgCt1616AY.1060.005358
ORF1ab/nsp6149V149AgTtgCt1616AY.850.006835
ORF1ab/nsp6149V149AgTtgCt1616AY.910.011687
ORF1ab/nsp6149V149AgTtgCt1616AY.950.012177
ORF1ab/nsp6149V149AgTtgCt1616B.1.2140.058608
ORF1ab/nsp6149V149AgTtgCt1616P.10.000252
ORF1ab/nsp6149V149AgTtgCt1515AY.1160.004302
ORF1ab/nsp6149V149AgTtgCt1515B.1.617.10.001934
ORF1ab/nsp6149V149AgTtgCt1414AY.870.011657
ORF1ab/nsp6149V149AgTtgCt1313AY.46.60.000939
ORF1ab/nsp6149V149AgTtgCt1212AY.1200.000446
ORF1ab/nsp6149V149AgTtgCt1212AY.290.000189
ORF1ab/nsp6149V149AgTtgCt1212AY.810.023904
ORF1ab/nsp6149V149AgTtgCt1212AY.920.003447
ORF1ab/nsp6149V149AgTtgCt1111AY.1080.012128
ORF1ab/nsp6149V149AgTtgCt1111AY.900.007529
ORF1ab/nsp6149V149AgTtgCt1010AY.7.10.001127
ORF1ab/nsp6149V149AgTtgCt1010B.1.4620.072464
ORF1ab/nsp6149V149AgTtgCt99AY.120.002845
ORF1ab/nsp6149V149AgTtgCt99AY.46.10.00924
ORF1ab/nsp6149V149AgTtgCt89AY.840.0035
ORF1ab/nsp6149V149AgTTgCC19AY.840.000437
ORF1ab/nsp6149V149AgTtgCt99B.1.1.2220.001836
ORF1ab/nsp6149V149AgTtgCt99B.1.177.730.005096
ORF1ab/nsp6149V149AgTtgCt88B.1.1.330.003367
ORF1ab/nsp6149V149AgTtgCt88B.1.36.80.008
ORF1ab/nsp6149V149AgTtgCt77B.1.5950.001827
ORF1ab/nsp6149V149AgTtgCt66AY.1090.004438
ORF1ab/nsp6149V149AgTtgCt66AY.340.000582
ORF1ab/nsp6149V149AgTtgCt66AY.7.20.003356
ORF1ab/nsp6149V149AgTtgCt55AY.4.20.000108
ORF1ab/nsp6149V149AgTtgCt55AY.760.024155
ORF1ab/nsp6149V149AgTtgCt55AY.99.20.000461
ORF1ab/nsp6149V149AgTtgCt55B.1.1.1210.012136
ORF1ab/nsp6149V149AgTtgCt55B.1.1.70.000004
ORF1ab/nsp6149V149AgTtgCt55B.1.360.00073
ORF1ab/nsp6149V149AgTtgCt55B.1.617.30.014925
ORF1ab/nsp6149V149AgTtgCt44AY.1040.007937
ORF1ab/nsp6149V149AgTtgCt44AY.220.008368
ORF1ab/nsp6149V149AgTtgCt44AY.70.000784
ORF1ab/nsp6149V149AgTtgCt44AY.820.005427
ORF1ab/nsp6149V149AgTtgCt44AY.99.10.006211
ORF1ab/nsp6149V149AgTtgCt44B.1.3500.01173
ORF1ab/nsp6149V149AgTtgCt44B.1.4650.015209
ORF1ab/nsp6149V149AgTtgCt33AY.1010.001471
ORF1ab/nsp6149V149AgTtgCt33AY.116.10.000934
ORF1ab/nsp6149V149AgTtgCt33AY.790.003632
ORF1ab/nsp6149V149AgTtgCt33AY.940.001328
ORF1ab/nsp6149V149AgTtgCt33N.40.012766
ORF1ab/nsp6149V149AgTtgCt22A0.000774
ORF1ab/nsp6149V149AgTtgCt22A.20.001324
ORF1ab/nsp6149V149AgTtgCt22AY.360.000296
ORF1ab/nsp6149V149AgTtgCt22AY.800.002257
ORF1ab/nsp6149V149AgTtgCt22AY.830.003448
ORF1ab/nsp6149V149AgTtgCt22AY.960.004149
ORF1ab/nsp6149V149AgTtgCt22B.1.1.5180.012658
ORF1ab/nsp6149V149AgTtgCt22B.1.1570.00597
ORF1ab/nsp6149V149AgTtgCt22B.1.2210.000142
ORF1ab/nsp6149V149AgTtgCt22B.1.2470.029851
ORF1ab/nsp6149V149AgTtgCt22B.1.5300.014286
ORF1ab/nsp6149V149AgTtgCt22B.1.6040.034483
ORF1ab/nsp6149V149AgTtgCt22B.1.6230.001073
ORF1ab/nsp6149V149AgTtgCt110.055556
ORF1ab/nsp6149V149AgTtgCt11AY.1110.000183
ORF1ab/nsp6149V149AgTtgCt11AY.120.10.000321
ORF1ab/nsp6149V149AgTtgCt11AY.34.10.00051
ORF1ab/nsp6149V149AgTtgCt11AY.4.40.000409
ORF1ab/nsp6149V149AgTtgCt11AY.60.000041
ORF1ab/nsp6149V149AgTtgCt11AY.970.001701
ORF1ab/nsp6149V149AgTtgCt11AY.990.001049
ORF1ab/nsp6149V149AgTtgCt11B.1.1.10.000327
ORF1ab/nsp6149V149AgTtgCt11B.1.1.1230.017857
ORF1ab/nsp6149V149AgTtgCt11B.1.1.2200.001859
ORF1ab/nsp6149V149AgTtgCt11B.1.1.2310.003096
ORF1ab/nsp6149V149AgTtgCt11B.1.1.280.000311
ORF1ab/nsp6149V149AgTtgCt11B.1.1.2940.001266
ORF1ab/nsp6149V149AgTtgCt11B.1.1.3060.000438
ORF1ab/nsp6149V149AgTtgCt11B.1.1.3260.001761
ORF1ab/nsp6149V149AgTtgCt11B.1.1.4320.001266
ORF1ab/nsp6149V149AgTtgCt11B.1.1.4480.002033
ORF1ab/nsp6149V149AgTtgCt11B.1.1.5150.02
ORF1ab/nsp6149V149AgTtgCt11B.1.1.5190.00004
ORF1ab/nsp6149V149AgTtgCt11B.1.1600.000031
ORF1ab/nsp6149V149AgTtgCt11B.1.177.40.000211
ORF1ab/nsp6149V149AgTtgCt11B.1.2080.04
ORF1ab/nsp6149V149AgTtgCt11B.1.2350.002519
ORF1ab/nsp6149V149AgTtgCt11B.1.2410.000812
ORF1ab/nsp6149V149AgTtgCt11B.1.2600.003344
ORF1ab/nsp6149V149AgTtgCt11B.1.3050.002151
ORF1ab/nsp6149V149AgTtgCt11B.1.3360.002439
ORF1ab/nsp6149V149AgTtgCt11B.1.4000.000429
ORF1ab/nsp6149V149AgTtgCt11B.1.4090.000781
ORF1ab/nsp6149V149AgTtgCt11B.1.4290.000024
ORF1ab/nsp6149V149AgTtgCt11B.1.4560.003268
ORF1ab/nsp6149V149AgTtgCt11B.1.4590.004082
ORF1ab/nsp6149V149AgTtgCt11B.1.466.20.000391
ORF1ab/nsp6149V149AgTtgCt11B.1.4690.00361
ORF1ab/nsp6149V149AgTtgCt11B.1.4740.001901
ORF1ab/nsp6149V149AgTtgCt11B.1.5260.000024
ORF1ab/nsp6149V149AgTtgCt11B.1.5960.000087
ORF1ab/nsp6149V149AgTtgCt11B.1.6190.000871
ORF1ab/nsp6149V149AgTtgCt11B.1.619.10.000641
ORF1ab/nsp6149V149AgTtgCt11B.1.6290.013333
ORF1ab/nsp6149V149AgTtgCt11B.550.00295
ORF1ab/nsp6149V149AgTtgCt11C.170.055556
ORF1ab/nsp6149V149AgTtgCt11P.1.120.000484
ORF1ab/nsp6149V149AgTtgCt11P.1.170.000162
ORF1ab/nsp6149V149AgTtgCt11Q.80.000165