CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : Mut = V139V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp6139V139VV3708VsyngtGgtT14799560.64638311387-11389
ORF1ab/nsp6139V139VV3708VsyngtGgtA14795210.35226511387-11389
ORF1ab/nsp6139V139VV3708VsyngtGgtC147920.0013522711387-11389

Details of the mutation V139V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp6139V139VgtGgtT9561479All0.000183
ORF1ab/nsp6139V139VgtGgtA5211479All0.0001
ORF1ab/nsp6139V139VgtGgtC21479All0
ORF1ab/nsp6139V139VgtGgtT752752AY.590.398305
ORF1ab/nsp6139V139VgtGgtA216220AY.440.001315
ORF1ab/nsp6139V139VgtGgtT4220AY.440.000024
ORF1ab/nsp6139V139VgtGgtA137144AY.40.000213
ORF1ab/nsp6139V139VgtGgtT7144AY.40.000011
ORF1ab/nsp6139V139VgtGgtT3773B.1.1.70.000033
ORF1ab/nsp6139V139VgtGgtA3673B.1.1.70.000032
ORF1ab/nsp6139V139VgtGgtT4949B.1.243.20.710145
ORF1ab/nsp6139V139VgtGgtT2633B.1.617.20.000098
ORF1ab/nsp6139V139VgtGgtA733B.1.617.20.000026
ORF1ab/nsp6139V139VgtGgtA2121B.1.5260.000494
ORF1ab/nsp6139V139VgtGgtA1414B.1.1.980.259259
ORF1ab/nsp6139V139VgtGgtA813B.1.20.00007
ORF1ab/nsp6139V139VgtGgtT313B.1.20.000026
ORF1ab/nsp6139V139VgtGgtC213B.1.20.000018
ORF1ab/nsp6139V139VgtGgtA1011AY.1030.000062
ORF1ab/nsp6139V139VgtGgtT111AY.1030.000006
ORF1ab/nsp6139V139VgtGgtA1111AY.4.50.001182
ORF1ab/nsp6139V139VgtGgtT59AY.250.00003
ORF1ab/nsp6139V139VgtGgtA49AY.250.000024
ORF1ab/nsp6139V139VgtGgtT99B.1.10.000163
ORF1ab/nsp6139V139VgtGgtA78B.10.000064
ORF1ab/nsp6139V139VgtGgtT18B.10.000009
ORF1ab/nsp6139V139VgtGgtT78B.1.2430.000487
ORF1ab/nsp6139V139VgtGgtA18B.1.2430.00007
ORF1ab/nsp6139V139VgtGgtT47AY.750.000224
ORF1ab/nsp6139V139VgtGgtA37AY.750.000168
ORF1ab/nsp6139V139VgtGgtT66AY.270.000388
ORF1ab/nsp6139V139VgtGgtT36AY.430.000013
ORF1ab/nsp6139V139VgtGgtA36AY.430.000013
ORF1ab/nsp6139V139VgtGgtA55AY.1060.001674
ORF1ab/nsp6139V139VgtGgtT44AY.760.019324
ORF1ab/nsp6139V139VgtGgtT23AY.39.10.000079
ORF1ab/nsp6139V139VgtGgtA13AY.39.10.00004
ORF1ab/nsp6139V139VgtGgtA23B.1.2580.000133
ORF1ab/nsp6139V139VgtGgtT13B.1.2580.000067
ORF1ab/nsp6139V139VgtGgtT33B.1.6270.006061
ORF1ab/nsp6139V139VgtGgtA33P.10.000047
ORF1ab/nsp6139V139VgtGgtT33P.1.170.000485
ORF1ab/nsp6139V139VgtGgtA22AY.1000.000092
ORF1ab/nsp6139V139VgtGgtT22AY.1020.000053
ORF1ab/nsp6139V139VgtGgtA12AY.340.000097
ORF1ab/nsp6139V139VgtGgtT12AY.340.000097
ORF1ab/nsp6139V139VgtGgtA12AY.390.000025
ORF1ab/nsp6139V139VgtGgtT12AY.390.000025
ORF1ab/nsp6139V139VgtGgtA22AY.9.10.000167
ORF1ab/nsp6139V139VgtGgtT22AY.980.000158
ORF1ab/nsp6139V139VgtGgtA22B.1.2790.001027
ORF1ab/nsp6139V139VgtGgtA22B.1.3510.000059
ORF1ab/nsp6139V139VgtGgtT22B.1.36.80.002
ORF1ab/nsp6139V139VgtGgtT22B.1.466.20.000782
ORF1ab/nsp6139V139VgtGgtA22B.1.5410.00885
ORF1ab/nsp6139V139VgtGgtT12D.20.000075
ORF1ab/nsp6139V139VgtGgtA12D.20.000075
ORF1ab/nsp6139V139VgtGgtA11A.2.50.000499
ORF1ab/nsp6139V139VgtGgtT11AY.1050.000643
ORF1ab/nsp6139V139VgtGgtT11AY.1070.000466
ORF1ab/nsp6139V139VgtGgtT11AY.120.000316
ORF1ab/nsp6139V139VgtGgtT11AY.1210.000135
ORF1ab/nsp6139V139VgtGgtA11AY.200.000039
ORF1ab/nsp6139V139VgtGgtT11AY.230.00007
ORF1ab/nsp6139V139VgtGgtA11AY.240.000431
ORF1ab/nsp6139V139VgtGgtA11AY.29.10.000221
ORF1ab/nsp6139V139VgtGgtA11AY.420.00004
ORF1ab/nsp6139V139VgtGgtA11AY.450.000122
ORF1ab/nsp6139V139VgtGgtT11AY.470.000031
ORF1ab/nsp6139V139VgtGgtT11AY.50.000021
ORF1ab/nsp6139V139VgtGgtT11AY.520.000814
ORF1ab/nsp6139V139VgtGgtA11AY.610.000105
ORF1ab/nsp6139V139VgtGgtT11AY.99.20.000092
ORF1ab/nsp6139V139VgtGgtA11B.1.1.2900.018182
ORF1ab/nsp6139V139VgtGgtT11B.1.1.4090.002833
ORF1ab/nsp6139V139VgtGgtT11B.1.1.5190.00004
ORF1ab/nsp6139V139VgtGgtT11B.1.1080.005814
ORF1ab/nsp6139V139VgtGgtA11B.1.177.120.000152
ORF1ab/nsp6139V139VgtGgtT11B.1.177.810.000189
ORF1ab/nsp6139V139VgtGgtA11B.1.2210.000071
ORF1ab/nsp6139V139VgtGgtA11B.1.2400.000216
ORF1ab/nsp6139V139VgtGgtA11B.1.3330.010526
ORF1ab/nsp6139V139VgtGgtT11B.1.360.000146
ORF1ab/nsp6139V139VgtGgtT11B.1.36.170.000494
ORF1ab/nsp6139V139VgtGgtA11B.1.36.310.001751
ORF1ab/nsp6139V139VgtGgtA11B.1.4160.001269
ORF1ab/nsp6139V139VgtGgtA11B.1.4270.00005
ORF1ab/nsp6139V139VgtGgtA11B.1.4460.02
ORF1ab/nsp6139V139VgtGgtT11B.1.5250.000113
ORF1ab/nsp6139V139VgtGgtT11B.1.5900.004545
ORF1ab/nsp6139V139VgtGgtA11B.1.5960.000087
ORF1ab/nsp6139V139VgtGgtA11B.1.6280.000352
ORF1ab/nsp6139V139VgtGgtT11B.1.6370.000073
ORF1ab/nsp6139V139VgtGgtA11P.1.120.000484