CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp6 | 131 | V131V | V3700V | syn | gtG | gtT | 21333 | 20813 | 0.975625 | 11363-11365 |
ORF1ab/nsp6 | 131 | V131V | V3700V | syn | gtG | gtA | 21333 | 425 | 0.0199222 | 11363-11365 |
ORF1ab/nsp6 | 131 | V131V | V3700V | syn | gtG | gtC | 21333 | 95 | 0.00445319 | 11363-11365 |
Details of the mutation V131V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 20813 | 21333 | All | 0.003981 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 425 | 21333 | All | 0.000081 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtC | 95 | 21333 | All | 0.000018 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 8836 | 8836 | AY.7.1 | 0.99583 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 5050 | 5050 | AY.7 | 0.989808 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1768 | 1768 | AY.7.2 | 0.988814 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 658 | 776 | B.1.1.7 | 0.000589 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 99 | 776 | B.1.1.7 | 0.000089 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtC | 19 | 776 | B.1.1.7 | 0.000017 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 615 | 624 | AY.4 | 0.000957 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 8 | 624 | AY.4 | 0.000012 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtC | 1 | 624 | AY.4 | 0.000002 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 570 | 605 | B.1.617.2 | 0.002146 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtC | 18 | 605 | B.1.617.2 | 0.000068 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 17 | 605 | B.1.617.2 | 0.000064 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 519 | 519 | AY.111 | 0.095055 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 483 | 486 | B.1.1.519 | 0.01918 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 3 | 486 | B.1.1.519 | 0.000119 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 393 | 403 | AY.43 | 0.001741 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtC | 7 | 403 | AY.43 | 0.000031 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 3 | 403 | AY.43 | 0.000013 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 110 | 141 | AY.102 | 0.002917 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 17 | 141 | AY.102 | 0.000451 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtC | 14 | 141 | AY.102 | 0.000371 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 137 | 139 | AY.42 | 0.005512 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 2 | 139 | AY.42 | 0.00008 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 98 | 102 | AY.44 | 0.000597 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 4 | 102 | AY.44 | 0.000024 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 95 | 98 | AY.39 | 0.002348 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtC | 3 | 98 | AY.39 | 0.000074 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 74 | 78 | R.1 | 0.006661 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 4 | 78 | R.1 | 0.00036 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 77 | 77 | B.1.258 | 0.005124 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 63 | 76 | B.1.2 | 0.000555 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 13 | 76 | B.1.2 | 0.000114 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 63 | 72 | AY.25 | 0.000379 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtC | 9 | 72 | AY.25 | 0.000054 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 54 | 71 | AY.103 | 0.000335 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 17 | 71 | AY.103 | 0.000106 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 63 | 63 | B.1.1.163 | 0.480916 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 63 | 63 | B.1.444 | 1 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 47 | 54 | AY.61 | 0.004925 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 7 | 54 | AY.61 | 0.000733 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 52 | 52 | AY.4.2.1 | 0.007747 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 48 | 51 | B.1.1 | 0.000871 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 3 | 51 | B.1.1 | 0.000054 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 39 | 41 | AY.6 | 0.001604 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtC | 2 | 41 | AY.6 | 0.000082 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 39 | 40 | AY.5 | 0.000805 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtC | 1 | 40 | AY.5 | 0.000021 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 32 | 40 | B.1 | 0.000293 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 6 | 40 | B.1 | 0.000055 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtC | 2 | 40 | B.1 | 0.000018 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 37 | 37 | AY.98 | 0.002923 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 34 | 37 | P.1 | 0.000536 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 2 | 37 | P.1 | 0.000032 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtC | 1 | 37 | P.1 | 0.000016 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 32 | 33 | B.1.177 | 0.000421 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 1 | 33 | B.1.177 | 0.000013 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 26 | 26 | AY.33 | 0.001736 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 25 | 25 | B.1.526 | 0.000588 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 25 | 25 | B.1.596 | 0.002178 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 23 | 24 | B.1.243 | 0.0016 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 1 | 24 | B.1.243 | 0.00007 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 20 | 23 | AY.3 | 0.000199 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtC | 2 | 23 | AY.3 | 0.00002 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 1 | 23 | AY.3 | 0.00001 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 16 | 22 | AY.20 | 0.000622 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtC | 5 | 22 | AY.20 | 0.000194 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 1 | 22 | AY.20 | 0.000039 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 20 | 21 | B.1.429 | 0.000471 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtC | 1 | 21 | B.1.429 | 0.000024 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 18 | 19 | B.1.351 | 0.000535 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 1 | 19 | B.1.351 | 0.00003 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 18 | 18 | B.1.160 | 0.000561 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 17 | 17 | AY.11 | 0.022758 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 17 | 17 | AY.120 | 0.000632 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 16 | 17 | AY.46 | 0.001665 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 1 | 17 | AY.46 | 0.000104 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 16 | 16 | B.1.177.21 | 0.001224 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 13 | 15 | AY.4.2 | 0.000282 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 2 | 15 | AY.4.2 | 0.000043 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 15 | 15 | AY.88 | 0.013263 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 15 | 15 | B.1.492 | 0.105634 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 15 | 15 | P.3 | 0.023923 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 13 | 13 | AY.113 | 0.001851 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 13 | 13 | AY.46.4 | 0.002139 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 13 | 13 | AY.9.1 | 0.001088 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 11 | 13 | AY.9.2 | 0.000404 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 2 | 13 | AY.9.2 | 0.000073 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 13 | 13 | C.20 | 1 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 9 | 12 | AY.121 | 0.001218 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 3 | 12 | AY.121 | 0.000406 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 12 | 12 | P.1.12 | 0.005808 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 10 | 11 | AY.119 | 0.000353 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 1 | 11 | AY.119 | 0.000035 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 10 | 10 | AY.75 | 0.00056 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 9 | 9 | AY.100 | 0.000414 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 9 | 9 | AY.46.1 | 0.00924 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 9 | 9 | AY.64 | 0.005357 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 9 | 9 | AY.74 | 0.001041 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 9 | 9 | AY.84 | 0.003937 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 6 | 9 | B.1.258.17 | 0.000624 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 3 | 9 | B.1.258.17 | 0.000312 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 7 | 8 | AY.106 | 0.002344 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtC | 1 | 8 | AY.106 | 0.000335 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 8 | 8 | AY.4.3 | 0.006734 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 8 | 8 | AY.45 | 0.000973 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 8 | 8 | B.1.36.18 | 0.003361 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 8 | 8 | B.1.427 | 0.000404 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 6 | 7 | AY.116 | 0.001721 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 1 | 7 | AY.116 | 0.000287 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 7 | 7 | B.1.1.284 | 0.000752 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 7 | 7 | B.1.147 | 0.005291 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtC | 4 | 7 | B.1.36 | 0.000584 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 7 | B.1.36 | 0.000292 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 1 | 7 | B.1.36 | 0.000146 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 6 | 6 | AY.107 | 0.002796 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 6 | 6 | AY.117 | 0.000507 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 5 | 6 | AY.26 | 0.000142 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtC | 1 | 6 | AY.26 | 0.000028 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 6 | 6 | AY.32 | 0.003195 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 6 | 6 | AY.4.4 | 0.002455 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 6 | 6 | AY.46.6 | 0.000433 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 6 | 6 | AY.47 | 0.000187 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 6 | 6 | AY.98.1 | 0.000291 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 6 | 6 | Q.8 | 0.000989 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 5 | 5 | AY.108 | 0.005513 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 4 | 5 | AY.23 | 0.000279 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtC | 1 | 5 | AY.23 | 0.00007 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 3 | 5 | AY.29 | 0.000047 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 2 | 5 | AY.29 | 0.000032 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 5 | 5 | B.1.1.189 | 0.007564 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 4 | 5 | P.2 | 0.000747 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 1 | 5 | P.2 | 0.000187 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 4 | 4 | AY.14 | 0.000352 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 4 | 4 | AY.46.2 | 0.002541 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 4 | 4 | AY.58 | 0.00363 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 4 | 4 | AY.92 | 0.001149 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 4 | 4 | B.1.1.198 | 0.005874 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 4 | 4 | B.1.1.263 | 0.006231 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 4 | 4 | B.1.119 | 0.042105 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 4 | 4 | B.1.177.54 | 0.002426 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 4 | 4 | B.1.214.2 | 0.002398 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 4 | 4 | B.1.240 | 0.000862 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 4 | 4 | B.1.258.14 | 0.003922 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 4 | 4 | B.1.544 | 0.024096 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 4 | 4 | L.2 | 0.045455 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 4 | 4 | N.5 | 0.007067 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 4 | 4 | Q.4 | 0.001819 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 3 | 3 | AY.12 | 0.000948 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 3 | 3 | AY.2 | 0.001068 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 3 | 3 | AY.27 | 0.000194 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 3 | 3 | AY.34 | 0.000291 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 3 | 3 | AY.40 | 0.002893 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 3 | 3 | AY.5.2 | 0.007389 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 3 | 3 | AY.5.3 | 0.001012 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 3 | AY.5.4 | 0.000553 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 1 | 3 | AY.5.4 | 0.000277 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 3 | 3 | AY.56 | 0.004815 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 3 | 3 | AY.57 | 0.001969 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 3 | 3 | B | 0.000383 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 3 | 3 | B.1.1.63 | 0.001157 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 3 | 3 | B.1.177.33 | 0.004934 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 3 | 3 | B.1.177.81 | 0.000568 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 3 | 3 | B.1.388 | 0.272727 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 3 | 3 | B.1.420 | 0.03125 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 3 | 3 | B.1.550 | 0.041096 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 3 | 3 | B.1.621 | 0.000266 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 3 | 3 | B.1.625 | 0.007059 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 3 | 3 | C.37 | 0.000348 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 3 | 3 | Q.1 | 0.000379 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | AY.101 | 0.000981 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | AY.114 | 0.000462 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | AY.120.1 | 0.000642 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | AY.19 | 0.002281 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | AY.38 | 0.000999 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 2 | AY.4.5 | 0.000107 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtC | 1 | 2 | AY.4.5 | 0.000107 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | AY.49 | 0.00639 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 2 | AY.55 | 0.000917 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 1 | 2 | AY.55 | 0.000917 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | AY.69 | 0.000373 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | AY.86 | 0.00166 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | AY.99 | 0.002099 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | AY.99.1 | 0.003106 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | AY.99.2 | 0.000184 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 2 | 2 | B.1.1.1 | 0.000653 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | B.1.1.161 | 0.007067 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | B.1.1.176 | 0.000879 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | B.1.1.214 | 0.000111 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | B.1.1.216 | 0.001781 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 2 | B.1.1.222 | 0.000204 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 1 | 2 | B.1.1.222 | 0.000204 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | B.1.1.231 | 0.006192 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 1 | 2 | B.1.1.28 | 0.000311 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 2 | B.1.1.28 | 0.000311 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | B.1.1.306 | 0.000877 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | B.1.177.75 | 0.002081 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | B.1.234 | 0.000264 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | B.1.438.1 | 0.000215 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | B.1.453 | 0.006472 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | B.1.466.2 | 0.000782 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | B.1.470 | 0.002809 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | B.1.524 | 0.002813 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | B.1.561 | 0.000794 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | B.1.617.3 | 0.00597 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 2 | 2 | P.1.14 | 0.000096 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | AE.1 | 0.011364 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | AY.104 | 0.001984 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | AY.109 | 0.00074 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | AY.28 | 0.00189 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | AY.3.1 | 0.000085 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | AY.39.2 | 0.001541 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | AY.46.5 | 0.000198 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | AY.51 | 0.000909 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | AY.8 | 0.000606 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | AY.80 | 0.001129 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | AY.9.2.1 | 0.001976 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | AY.90 | 0.000684 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | AY.93 | 0.000273 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | AY.96 | 0.002075 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.1.10 | 0.001115 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.1.101 | 0.01 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.1.141 | 0.002012 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.1.194 | 0.00495 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 1 | 1 | B.1.1.256 | 0.013699 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.1.261 | 0.008621 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.1.277 | 0.000759 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.1.294 | 0.001266 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.1.351 | 0.002793 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.1.448 | 0.002033 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.1.486 | 0.001577 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.1.50 | 0.000679 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.1.52 | 0.012195 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.1.83 | 0.00271 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.177.5 | 0.001242 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.177.56 | 0.000668 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.222 | 0.001692 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.279 | 0.000514 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.3 | 0.002618 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtA | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.36.10 | 0.004785 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtC | 1 | 1 | B.1.36.16 | 0.001425 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.362 | 0.001541 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.471 | 0.002732 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.498 | 0.020408 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.499 | 0.00105 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.517 | 0.000427 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.577 | 0.000687 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.1.639 | 0.021739 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | B.6.6 | 0.000889 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtC | 1 | 1 | C.1 | 0.002392 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | P.4 | 0.003802 |
ORF1ab/nsp6 | 131 | V131V | gtG | gtT | 1 | 1 | Q.3 | 0.000145 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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