CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : Mut = R187R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp6187R187RR3756RsynagAagG673067110.99717711531-11533
ORF1ab/nsp6187R187RR3756RsynAgaCga6730150.0022288311531-11533
ORF1ab/nsp6187R187RR3756RsynAgACgG673020.00029717711531-11533
ORF1ab/nsp6187R187RR3756RsynAgACgC673010.00014858811531-11533
ORF1ab/nsp6187R187RR3756RsynAgACgT673010.00014858811531-11533

Details of the mutation R187R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp6187R187RagAagG67116730All0.001284
ORF1ab/nsp6187R187RAgaCga156730All0.000003
ORF1ab/nsp6187R187RAgACgG26730All0
ORF1ab/nsp6187R187RAgACgT16730All0
ORF1ab/nsp6187R187RAgACgC16730All0
ORF1ab/nsp6187R187RagAagG61786178B.1.1770.081349
ORF1ab/nsp6187R187RagAagG355355B.1.177.630.959459
ORF1ab/nsp6187R187RagAagG2828AY.260.000793
ORF1ab/nsp6187R187RagAagG2324B.10.000211
ORF1ab/nsp6187R187RAgaCga124B.10.000009
ORF1ab/nsp6187R187RagAagG2424P.10.000378
ORF1ab/nsp6187R187RagAagG2323B.1.1.70.000021
ORF1ab/nsp6187R187RagAagG1215AY.40.000019
ORF1ab/nsp6187R187RAgaCga315AY.40.000005
ORF1ab/nsp6187R187RagAagG1111B.1.177.641
ORF1ab/nsp6187R187RagAagG69B.1.617.20.000023
ORF1ab/nsp6187R187RAgaCga39B.1.617.20.000011
ORF1ab/nsp6187R187RagAagG44AY.1210.000541
ORF1ab/nsp6187R187RagAagG44AY.430.000018
ORF1ab/nsp6187R187RagAagG44B.1.20.000035
ORF1ab/nsp6187R187RagAagG44B.1.2580.000266
ORF1ab/nsp6187R187RAgACgG130.055556
ORF1ab/nsp6187R187RAgaCga130.055556
ORF1ab/nsp6187R187RagAagG130.055556
ORF1ab/nsp6187R187RAgACgC13AY.4.50.000107
ORF1ab/nsp6187R187RAgaCga13AY.4.50.000107
ORF1ab/nsp6187R187RAgACgT13AY.4.50.000107
ORF1ab/nsp6187R187RagAagG33B.1.177.570.000843
ORF1ab/nsp6187R187RAgaCga33B.1.2400.000647
ORF1ab/nsp6187R187RagAagG22AY.120.000632
ORF1ab/nsp6187R187RagAagG22B.1.10.000036
ORF1ab/nsp6187R187RagAagG22B.1.177.50.002484
ORF1ab/nsp6187R187RagAagG22B.1.177.60.001953
ORF1ab/nsp6187R187RagAagG11AD.20.000219
ORF1ab/nsp6187R187RagAagG11AY.1000.000046
ORF1ab/nsp6187R187RagAagG11AY.1030.000006
ORF1ab/nsp6187R187RAgaCga11AY.1190.000035
ORF1ab/nsp6187R187RagAagG11AY.200.000039
ORF1ab/nsp6187R187RagAagG11AY.250.000006
ORF1ab/nsp6187R187RagAagG11AY.30.00001
ORF1ab/nsp6187R187RAgaCga11AY.34.10.00051
ORF1ab/nsp6187R187RagAagG11AY.4.20.000022
ORF1ab/nsp6187R187RagAagG11AY.440.000006
ORF1ab/nsp6187R187RagAagG11AY.580.000907
ORF1ab/nsp6187R187RAgACgG11AY.840.000437
ORF1ab/nsp6187R187RagAagG11B0.000128
ORF1ab/nsp6187R187RagAagG11B.1.1.2030.016949
ORF1ab/nsp6187R187RagAagG11B.1.1.2070.001182
ORF1ab/nsp6187R187RagAagG11B.1.1.3150.008475
ORF1ab/nsp6187R187RagAagG11B.1.1600.000031
ORF1ab/nsp6187R187RagAagG11B.1.177.210.000076
ORF1ab/nsp6187R187RagAagG11B.1.177.620.001192
ORF1ab/nsp6187R187RagAagG11B.1.177.650.000665
ORF1ab/nsp6187R187RagAagG11B.1.2360.002053
ORF1ab/nsp6187R187RagAagG11B.1.4290.000024
ORF1ab/nsp6187R187RagAagG11B.1.4700.001404
ORF1ab/nsp6187R187RAgaCga11B.1.5260.000024
ORF1ab/nsp6187R187RagAagG11B.1.5960.000087
ORF1ab/nsp6187R187RagAagG11P.20.000187
ORF1ab/nsp6187R187RagAagG11Q.80.000165