CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : Mut = R129R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp6129R129RR3698RsynagAagG1311030.7862611357-11359
ORF1ab/nsp6129R129RR3698RsynAgaCga131280.2137411357-11359

Details of the mutation R129R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp6129R129RagAagG103131All0.00002
ORF1ab/nsp6129R129RAgaCga28131All0.000005
ORF1ab/nsp6129R129RagAagG2424B.1.1.70.000021
ORF1ab/nsp6129R129RagAagG1515AY.1170.001268
ORF1ab/nsp6129R129RagAagG58B.1.617.20.000019
ORF1ab/nsp6129R129RAgaCga38B.1.617.20.000011
ORF1ab/nsp6129R129RagAagG77AY.1000.000322
ORF1ab/nsp6129R129RagAagG57AY.40.000008
ORF1ab/nsp6129R129RAgaCga27AY.40.000003
ORF1ab/nsp6129R129RagAagG56AY.250.00003
ORF1ab/nsp6129R129RAgaCga16AY.250.000006
ORF1ab/nsp6129R129RagAagG66B.1.1.1170.058252
ORF1ab/nsp6129R129RagAagG55AY.1020.000133
ORF1ab/nsp6129R129RAgaCga35B.10.000027
ORF1ab/nsp6129R129RagAagG25B.10.000018
ORF1ab/nsp6129R129RagAagG23AY.430.000009
ORF1ab/nsp6129R129RAgaCga13AY.430.000004
ORF1ab/nsp6129R129RagAagG23AY.460.000208
ORF1ab/nsp6129R129RAgaCga13AY.460.000104
ORF1ab/nsp6129R129RAgaCga33AY.9.20.00011
ORF1ab/nsp6129R129RagAagG33B.1.1.2140.000166
ORF1ab/nsp6129R129RagAagG33P.1.140.000143
ORF1ab/nsp6129R129RagAagG22AY.290.000032
ORF1ab/nsp6129R129RagAagG12AY.470.000031
ORF1ab/nsp6129R129RAgaCga12AY.470.000031
ORF1ab/nsp6129R129RAgaCga22B.1.20.000018
ORF1ab/nsp6129R129RagAagG22B.1.258.170.000208
ORF1ab/nsp6129R129RAgaCga22B.1.4280.002041
ORF1ab/nsp6129R129RagAagG11A.23.10.000704
ORF1ab/nsp6129R129RagAagG11AY.10.000396
ORF1ab/nsp6129R129RagAagG11AY.1030.000006
ORF1ab/nsp6129R129RAgaCga11AY.1040.001984
ORF1ab/nsp6129R129RAgaCga11AY.1210.000135
ORF1ab/nsp6129R129RagAagG11AY.30.00001
ORF1ab/nsp6129R129RAgaCga11AY.4.20.000022
ORF1ab/nsp6129R129RagAagG11AY.420.00004
ORF1ab/nsp6129R129RagAagG11AY.440.000006
ORF1ab/nsp6129R129RagAagG11AY.46.60.000072
ORF1ab/nsp6129R129RAgaCga11AY.60.000041
ORF1ab/nsp6129R129RagAagG11B.1.10.000018
ORF1ab/nsp6129R129RAgaCga11B.1.1.3070.002532
ORF1ab/nsp6129R129RAgaCga11B.1.1.310.066667
ORF1ab/nsp6129R129RagAagG11B.1.1.4590.015385
ORF1ab/nsp6129R129RAgaCga11B.1.2580.000067
ORF1ab/nsp6129R129RagAagG11B.1.3690.000285
ORF1ab/nsp6129R129RagAagG11B.1.4290.000024
ORF1ab/nsp6129R129RAgaCga11B.1.5230.002451
ORF1ab/nsp6129R129RagAagG11C.300.001727
ORF1ab/nsp6129R129RAgaCga11C.310.017857
ORF1ab/nsp6129R129RagAagG11D.20.000075
ORF1ab/nsp6129R129RagAagG11P.10.000016