CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : Mut = Q257L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp6257Q257LQ3826LnonsyncAgcTg69590.85507211741-11743
ORF1ab/nsp6257Q257LQ3826LnonsyncAGcTT6950.072463811741-11743
ORF1ab/nsp6257Q257LQ3826LnonsynCAgTTg6920.028985511741-11743
ORF1ab/nsp6257Q257LQ3826LnonsyncAGcTA6920.028985511741-11743
ORF1ab/nsp6257Q257LQ3826LnonsyncAGcTC6910.014492811741-11743

Details of the mutation Q257L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp6257Q257LcAgcTg5969All0.000011
ORF1ab/nsp6257Q257LcAGcTT569All0.000001
ORF1ab/nsp6257Q257LcAGcTA269All0
ORF1ab/nsp6257Q257LCAgTTg269All0
ORF1ab/nsp6257Q257LcAGcTC169All0
ORF1ab/nsp6257Q257LcAgcTg1414B.1.617.20.000053
ORF1ab/nsp6257Q257LcAgcTg1010AY.440.000061
ORF1ab/nsp6257Q257LcAgcTg77AY.40.000011
ORF1ab/nsp6257Q257LcAGcTT260.111111
ORF1ab/nsp6257Q257LcAgcTg260.111111
ORF1ab/nsp6257Q257LCAgTTg260.111111
ORF1ab/nsp6257Q257LcAgcTg36B.1.1.1920.006928
ORF1ab/nsp6257Q257LcAGcTT36B.1.1.1920.006928
ORF1ab/nsp6257Q257LcAgcTg44B.1.4290.000094
ORF1ab/nsp6257Q257LcAgcTg33B.1.177.560.002003
ORF1ab/nsp6257Q257LcAgcTg33B.1.617.10.000387
ORF1ab/nsp6257Q257LcAgcTg22B.10.000018
ORF1ab/nsp6257Q257LcAgcTg22B.1.1.70.000002
ORF1ab/nsp6257Q257LcAgcTg22B.1.2430.000139
ORF1ab/nsp6257Q257LcAgcTg12B.1.90.006173
ORF1ab/nsp6257Q257LcAGcTC12B.1.90.006173
ORF1ab/nsp6257Q257LcAgcTg11A.10.000282
ORF1ab/nsp6257Q257LcAGcTA11AY.250.000006
ORF1ab/nsp6257Q257LcAGcTA11AY.430.000004
ORF1ab/nsp6257Q257LcAgcTg11AY.46.40.000165
ORF1ab/nsp6257Q257LcAgcTg11AY.50.000021
ORF1ab/nsp6257Q257LcAgcTg11B.1.20.000009
ORF1ab/nsp6257Q257LcAgcTg11B.1.2580.000067
ORF1ab/nsp6257Q257LcAgcTg11B.1.438.10.000107