CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : Mut = P198L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp6198P198LP3767LnonsyncCtcTt345834500.99768711564-11566
ORF1ab/nsp6198P198LP3767LnonsyncCTcTA345830.00086755411564-11566
ORF1ab/nsp6198P198LP3767LnonsyncCTcTG345820.00057836911564-11566
ORF1ab/nsp6198P198LP3767LnonsynCCTTTG345820.00057836911564-11566
ORF1ab/nsp6198P198LP3767LnonsyncCTcTC345810.00028918511564-11566

Details of the mutation P198L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp6198P198LcCtcTt34503458All0.00066
ORF1ab/nsp6198P198LcCTcTA33458All0.000001
ORF1ab/nsp6198P198LcCTcTG23458All0
ORF1ab/nsp6198P198LCCTTTG23458All0
ORF1ab/nsp6198P198LcCTcTC13458All0
ORF1ab/nsp6198P198LcCtcTt20442045B.1.1.70.00183
ORF1ab/nsp6198P198LcCTcTA12045B.1.1.70.000001
ORF1ab/nsp6198P198LcCtcTt263263L.30.932624
ORF1ab/nsp6198P198LcCtcTt171171AY.40.000266
ORF1ab/nsp6198P198LcCtcTt109109AY.250.000656
ORF1ab/nsp6198P198LcCtcTt9191B.1.617.20.000343
ORF1ab/nsp6198P198LcCtcTt7373AY.1030.000453
ORF1ab/nsp6198P198LcCtcTt7171AY.740.008211
ORF1ab/nsp6198P198LcCtcTt6363AY.440.000383
ORF1ab/nsp6198P198LcCtcTt5656AY.450.006814
ORF1ab/nsp6198P198LcCtcTt4545AY.420.00181
ORF1ab/nsp6198P198LcCtcTt3131AY.430.000137
ORF1ab/nsp6198P198LcCtcTt2020B.1.20.000176
ORF1ab/nsp6198P198LcCtcTt1919AY.1020.000504
ORF1ab/nsp6198P198LcCtcTt1919B.10.000174
ORF1ab/nsp6198P198LcCtcTt1818Q.80.002968
ORF1ab/nsp6198P198LcCtcTt1717B.1.2580.001131
ORF1ab/nsp6198P198LcCtcTt1616AY.9.10.00134
ORF1ab/nsp6198P198LcCtcTt1515AY.390.000371
ORF1ab/nsp6198P198LcCtcTt1515AY.4.50.001612
ORF1ab/nsp6198P198LcCtcTt1414AY.470.000435
ORF1ab/nsp6198P198LcCtcTt1313AY.30.000129
ORF1ab/nsp6198P198LcCtcTt7120.388889
ORF1ab/nsp6198P198LcCTcTA2120.111111
ORF1ab/nsp6198P198LcCTcTG1120.055556
ORF1ab/nsp6198P198LCCTTTG1120.055556
ORF1ab/nsp6198P198LcCTcTC1120.055556
ORF1ab/nsp6198P198LcCtcTt1212AY.200.000466
ORF1ab/nsp6198P198LcCtcTt1212AY.980.000948
ORF1ab/nsp6198P198LcCtcTt1111AY.50.000227
ORF1ab/nsp6198P198LcCtcTt1111B.1.10.0002
ORF1ab/nsp6198P198LcCtcTt1111B.1.5960.000959
ORF1ab/nsp6198P198LcCtcTt99AY.1000.000414
ORF1ab/nsp6198P198LcCtcTt88AY.99.10.012422
ORF1ab/nsp6198P198LcCtcTt88B.1.1770.000105
ORF1ab/nsp6198P198LcCtcTt68B.1.2210.000426
ORF1ab/nsp6198P198LcCTcTG18B.1.2210.000071
ORF1ab/nsp6198P198LCCTTTG18B.1.2210.000071
ORF1ab/nsp6198P198LcCtcTt77AY.1210.000947
ORF1ab/nsp6198P198LcCtcTt77B.1.3510.000208
ORF1ab/nsp6198P198LcCtcTt77P.1.140.000335
ORF1ab/nsp6198P198LcCtcTt66AY.260.00017
ORF1ab/nsp6198P198LcCtcTt66B.1.2790.003082
ORF1ab/nsp6198P198LcCtcTt66P.10.000095
ORF1ab/nsp6198P198LcCtcTt55AY.1190.000177
ORF1ab/nsp6198P198LcCtcTt55AY.610.000524
ORF1ab/nsp6198P198LcCtcTt55B.1.1.2070.00591
ORF1ab/nsp6198P198LcCtcTt55B.1.6210.000443
ORF1ab/nsp6198P198LcCtcTt55B.1.6280.001762
ORF1ab/nsp6198P198LcCtcTt44AE.80.001956
ORF1ab/nsp6198P198LcCtcTt44AY.290.000063
ORF1ab/nsp6198P198LcCtcTt44AY.60.000165
ORF1ab/nsp6198P198LcCtcTt44B.1.1.100.004459
ORF1ab/nsp6198P198LcCtcTt44B.1.4000.001716
ORF1ab/nsp6198P198LcCtcTt33AY.1200.000112
ORF1ab/nsp6198P198LcCtcTt33AY.230.000209
ORF1ab/nsp6198P198LcCtcTt33AY.330.0002
ORF1ab/nsp6198P198LcCtcTt33AY.4.20.000065
ORF1ab/nsp6198P198LcCtcTt33B.1.1.390.001529
ORF1ab/nsp6198P198LcCtcTt33B.1.6370.000219
ORF1ab/nsp6198P198LcCtcTt22A0.000774
ORF1ab/nsp6198P198LcCtcTt22AY.1080.002205
ORF1ab/nsp6198P198LcCtcTt22AY.1170.000169
ORF1ab/nsp6198P198LcCtcTt22AY.3.10.000171
ORF1ab/nsp6198P198LcCtcTt22AY.350.000466
ORF1ab/nsp6198P198LcCtcTt22AY.750.000112
ORF1ab/nsp6198P198LcCtcTt22AY.99.20.000184
ORF1ab/nsp6198P198LcCtcTt22AZ.10.001735
ORF1ab/nsp6198P198LcCtcTt22B.1.1.4090.005666
ORF1ab/nsp6198P198LcCtcTt22B.1.1600.000062
ORF1ab/nsp6198P198LcCtcTt22B.1.4290.000047
ORF1ab/nsp6198P198LcCtcTt22B.1.617.10.000258
ORF1ab/nsp6198P198LcCtcTt22P.1.60.003891
ORF1ab/nsp6198P198LcCtcTt11A.190.009434
ORF1ab/nsp6198P198LcCtcTt11AW.10.003049
ORF1ab/nsp6198P198LcCtcTt11AY.116.10.000311
ORF1ab/nsp6198P198LcCtcTt11AY.1180.000063
ORF1ab/nsp6198P198LcCtcTt11AY.240.000431
ORF1ab/nsp6198P198LcCtcTt11AY.39.1.10.000725
ORF1ab/nsp6198P198LcCtcTt11AY.460.000104
ORF1ab/nsp6198P198LcCtcTt11AY.46.10.001027
ORF1ab/nsp6198P198LcCtcTt11AY.490.003195
ORF1ab/nsp6198P198LcCtcTt11AY.5.30.000337
ORF1ab/nsp6198P198LcCtcTt11AY.520.000814
ORF1ab/nsp6198P198LcCtcTt11AY.550.000917
ORF1ab/nsp6198P198LcCtcTt11AY.620.000436
ORF1ab/nsp6198P198LcCtcTt11AY.650.000533
ORF1ab/nsp6198P198LcCtcTt11AY.670.000464
ORF1ab/nsp6198P198LcCtcTt11AY.690.000187
ORF1ab/nsp6198P198LcCtcTt11AY.710.000475
ORF1ab/nsp6198P198LcCtcTt11AY.840.000437
ORF1ab/nsp6198P198LcCtcTt11AY.860.00083
ORF1ab/nsp6198P198LcCtcTt11AY.870.000833
ORF1ab/nsp6198P198LcCtcTt11AY.910.00073
ORF1ab/nsp6198P198LcCtcTt11AY.91.10.004065
ORF1ab/nsp6198P198LcCtcTt11AY.930.000273
ORF1ab/nsp6198P198LcCtcTt11AY.990.001049
ORF1ab/nsp6198P198LcCtcTt11B.1.1.1940.00495
ORF1ab/nsp6198P198LcCtcTt11B.1.1.2160.00089
ORF1ab/nsp6198P198LcCtcTt11B.1.1.5190.00004
ORF1ab/nsp6198P198LcCtcTt11B.1.1.700.000341
ORF1ab/nsp6198P198LcCtcTt11B.1.160.170.001701
ORF1ab/nsp6198P198LcCtcTt11B.1.177.170.000821
ORF1ab/nsp6198P198LcCtcTt11B.1.177.790.002342
ORF1ab/nsp6198P198LcCtcTt11B.1.214.20.0006
ORF1ab/nsp6198P198LcCtcTt11B.1.2400.000216
ORF1ab/nsp6198P198LcCtcTt11B.1.258.170.000104
ORF1ab/nsp6198P198LcCtcTt11B.1.3260.007576
ORF1ab/nsp6198P198LcCtcTt11B.1.4270.00005
ORF1ab/nsp6198P198LcCtcTt11B.1.5130.013889
ORF1ab/nsp6198P198LcCtcTt11B.1.6360.006711
ORF1ab/nsp6198P198LcCtcTt11B.400.000364
ORF1ab/nsp6198P198LcCtcTt11C.360.000911
ORF1ab/nsp6198P198LcCtcTt11C.390.018868
ORF1ab/nsp6198P198LcCtcTt11P.1.160.000374
ORF1ab/nsp6198P198LcCtcTt11Q.10.000126
ORF1ab/nsp6198P198LcCtcTt11Q.40.000455