CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : Mut = N82S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp682N82SN3651SnonsynaAtaGt8208190.9987811216-11218
ORF1ab/nsp682N82SN3651SnonsynAAtTCt82010.0012195111216-11218

Details of the mutation N82S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp682N82SaAtaGt819820All0.000157
ORF1ab/nsp682N82SAAtTCt1820All0
ORF1ab/nsp682N82SaAtaGt597597A.270.988411
ORF1ab/nsp682N82SaAtaGt128128B.1.415.10.969697
ORF1ab/nsp682N82SaAtaGt2424B.1.10.000435
ORF1ab/nsp682N82SaAtaGt2020A0.00774
ORF1ab/nsp682N82SaAtaGt1515B.10.000137
ORF1ab/nsp682N82SaAtaGt88B0.001022
ORF1ab/nsp682N82SaAtaGt55B.1.2430.000348
ORF1ab/nsp682N82SaAtaGt33A.290.015957
ORF1ab/nsp682N82SaAtaGt33B.1.1.70.000003
ORF1ab/nsp682N82SaAtaGt22B.1.1.1610.007067
ORF1ab/nsp682N82SaAtaGt22B.1.5760.001813
ORF1ab/nsp682N82SAAtTCt110.055556
ORF1ab/nsp682N82SaAtaGt11A.10.000282
ORF1ab/nsp682N82SaAtaGt11A.20.000662
ORF1ab/nsp682N82SaAtaGt11AY.30.00001
ORF1ab/nsp682N82SaAtaGt11B.1.1.280.000311
ORF1ab/nsp682N82SaAtaGt11B.1.1.3070.002532
ORF1ab/nsp682N82SaAtaGt11B.1.1.330.000421
ORF1ab/nsp682N82SaAtaGt11B.1.1.4090.002833
ORF1ab/nsp682N82SaAtaGt11B.1.160.330.004425
ORF1ab/nsp682N82SaAtaGt11B.1.177.730.000566
ORF1ab/nsp682N82SaAtaGt11B.1.6230.000536
ORF1ab/nsp682N82SaAtaGt11B.550.00295
ORF1ab/nsp682N82SaAtaGt11C.60.037037