CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : Mut = M58I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp658M58IM3627InonsynatGatT158113060.82605911144-11146
ORF1ab/nsp658M58IM3627InonsynatGatA15812260.14294711144-11146
ORF1ab/nsp658M58IM3627InonsynatGatC1581490.03099311144-11146

Details of the mutation M58I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp658M58IatGatT13061581All0.00025
ORF1ab/nsp658M58IatGatA2261581All0.000043
ORF1ab/nsp658M58IatGatC491581All0.000009
ORF1ab/nsp658M58IatGatT243269B.1.1.70.000218
ORF1ab/nsp658M58IatGatC17269B.1.1.70.000015
ORF1ab/nsp658M58IatGatA9269B.1.1.70.000008
ORF1ab/nsp658M58IatGatT207207AY.680.056666
ORF1ab/nsp658M58IatGatT95104AY.430.000421
ORF1ab/nsp658M58IatGatC5104AY.430.000022
ORF1ab/nsp658M58IatGatA4104AY.430.000018
ORF1ab/nsp658M58IatGatT8897AY.1020.002333
ORF1ab/nsp658M58IatGatA797AY.1020.000186
ORF1ab/nsp658M58IatGatC297AY.1020.000053
ORF1ab/nsp658M58IatGatT6681B.1.617.20.000249
ORF1ab/nsp658M58IatGatA1581B.1.617.20.000056
ORF1ab/nsp658M58IatGatT5378AY.40.000082
ORF1ab/nsp658M58IatGatA2178AY.40.000033
ORF1ab/nsp658M58IatGatC478AY.40.000006
ORF1ab/nsp658M58IatGatT7272AY.260.002038
ORF1ab/nsp658M58IatGatA3863AY.440.000231
ORF1ab/nsp658M58IatGatT2463AY.440.000146
ORF1ab/nsp658M58IatGatC163AY.440.000006
ORF1ab/nsp658M58IatGatT4242B.1.1.2680.626866
ORF1ab/nsp658M58IatGatT3434B.1.20.000299
ORF1ab/nsp658M58IatGatT2133B.10.000192
ORF1ab/nsp658M58IatGatA1233B.10.00011
ORF1ab/nsp658M58IatGatT3132B.1.6370.002265
ORF1ab/nsp658M58IatGatA132B.1.6370.000073
ORF1ab/nsp658M58IatGatC821AY.1030.00005
ORF1ab/nsp658M58IatGatT721AY.1030.000043
ORF1ab/nsp658M58IatGatA621AY.1030.000037
ORF1ab/nsp658M58IatGatT2020A.2.5.20.031447
ORF1ab/nsp658M58IatGatT2020AY.1180.001253
ORF1ab/nsp658M58IatGatT2020B.1.10.000363
ORF1ab/nsp658M58IatGatT1416AY.250.000084
ORF1ab/nsp658M58IatGatA216AY.250.000012
ORF1ab/nsp658M58IatGatT1414B.1.1.700.004775
ORF1ab/nsp658M58IatGatT1313A0.005031
ORF1ab/nsp658M58IatGatT1313AY.1190.000459
ORF1ab/nsp658M58IatGatT1313B.1.1.5230.020313
ORF1ab/nsp658M58IatGatA1313B.1.258.110.005153
ORF1ab/nsp658M58IatGatT1112B.1.3510.000327
ORF1ab/nsp658M58IatGatC112B.1.3510.00003
ORF1ab/nsp658M58IatGatA912P.10.000142
ORF1ab/nsp658M58IatGatT212P.10.000032
ORF1ab/nsp658M58IatGatC112P.10.000016
ORF1ab/nsp658M58IatGatA711AY.1200.00026
ORF1ab/nsp658M58IatGatT411AY.1200.000149
ORF1ab/nsp658M58IatGatT1010AY.1170.000845
ORF1ab/nsp658M58IatGatA1010AY.610.001048
ORF1ab/nsp658M58IatGatT1010B.1.2390.01221
ORF1ab/nsp658M58IatGatT1010B.1.5090.008658
ORF1ab/nsp658M58IatGatT89AY.4.20.000174
ORF1ab/nsp658M58IatGatA19AY.4.20.000022
ORF1ab/nsp658M58IatGatT99B.1.1.2220.001836
ORF1ab/nsp658M58IatGatT58AY.390.000124
ORF1ab/nsp658M58IatGatA38AY.390.000074
ORF1ab/nsp658M58IatGatT68B.1.1770.000079
ORF1ab/nsp658M58IatGatC18B.1.1770.000013
ORF1ab/nsp658M58IatGatA18B.1.1770.000013
ORF1ab/nsp658M58IatGatT77B.1.1.630.002701
ORF1ab/nsp658M58IatGatA77B.1.4290.000165
ORF1ab/nsp658M58IatGatT66B.1.1600.000187
ORF1ab/nsp658M58IatGatA56B.1.258.170.00052
ORF1ab/nsp658M58IatGatT16B.1.258.170.000104
ORF1ab/nsp658M58IatGatA55AY.29.10.001103
ORF1ab/nsp658M58IatGatA55B.1.4710.013661
ORF1ab/nsp658M58IatGatA240.111111
ORF1ab/nsp658M58IatGatC240.111111
ORF1ab/nsp658M58IatGatT34AY.450.000365
ORF1ab/nsp658M58IatGatA14AY.450.000122
ORF1ab/nsp658M58IatGatA44AY.540.000381
ORF1ab/nsp658M58IatGatT34AY.60.000123
ORF1ab/nsp658M58IatGatA14AY.60.000041
ORF1ab/nsp658M58IatGatT44AY.70.000784
ORF1ab/nsp658M58IatGatA44B.1.5430.04
ORF1ab/nsp658M58IatGatA24B.1.617.10.000258
ORF1ab/nsp658M58IatGatC14B.1.617.10.000129
ORF1ab/nsp658M58IatGatT14B.1.617.10.000129
ORF1ab/nsp658M58IatGatA23AY.200.000078
ORF1ab/nsp658M58IatGatT13AY.200.000039
ORF1ab/nsp658M58IatGatT23AY.270.000129
ORF1ab/nsp658M58IatGatA13AY.270.000065
ORF1ab/nsp658M58IatGatA23AY.30.00002
ORF1ab/nsp658M58IatGatT13AY.30.00001
ORF1ab/nsp658M58IatGatA33AY.360.000445
ORF1ab/nsp658M58IatGatT23AY.420.00008
ORF1ab/nsp658M58IatGatA13AY.420.00004
ORF1ab/nsp658M58IatGatT33AY.460.000312
ORF1ab/nsp658M58IatGatT33AY.50.000062
ORF1ab/nsp658M58IatGatT33AY.7.10.000338
ORF1ab/nsp658M58IatGatT33B.1.1.1890.004539
ORF1ab/nsp658M58IatGatT33B.1.1.370.000579
ORF1ab/nsp658M58IatGatA23B.1.2430.000139
ORF1ab/nsp658M58IatGatC13B.1.2430.00007
ORF1ab/nsp658M58IatGatT33B.1.36.290.001552
ORF1ab/nsp658M58IatGatT23B.1.4270.000101
ORF1ab/nsp658M58IatGatA13B.1.4270.00005
ORF1ab/nsp658M58IatGatT33B.1.5960.000261
ORF1ab/nsp658M58IatGatT22A.210.00554
ORF1ab/nsp658M58IatGatC22A.50.003846
ORF1ab/nsp658M58IatGatT22AY.3.10.000171
ORF1ab/nsp658M58IatGatA22AY.34.10.00102
ORF1ab/nsp658M58IatGatA12AY.39.10.00004
ORF1ab/nsp658M58IatGatT12AY.39.10.00004
ORF1ab/nsp658M58IatGatT22AY.400.001929
ORF1ab/nsp658M58IatGatT22AY.470.000062
ORF1ab/nsp658M58IatGatT22AY.550.001835
ORF1ab/nsp658M58IatGatA22AY.620.000871
ORF1ab/nsp658M58IatGatT22AY.740.000231
ORF1ab/nsp658M58IatGatT22AY.9.20.000073
ORF1ab/nsp658M58IatGatT22B.1.1.3050.007722
ORF1ab/nsp658M58IatGatT22B.1.177.210.000153
ORF1ab/nsp658M58IatGatT22B.1.3360.004878
ORF1ab/nsp658M58IatGatT12B.1.360.000146
ORF1ab/nsp658M58IatGatC12B.1.360.000146
ORF1ab/nsp658M58IatGatT22B.1.3960.001411
ORF1ab/nsp658M58IatGatA22C.370.000232
ORF1ab/nsp658M58IatGatT22D.20.00015
ORF1ab/nsp658M58IatGatT22R.10.00018
ORF1ab/nsp658M58IatGatA11A.2.50.000499
ORF1ab/nsp658M58IatGatT11A.270.001656
ORF1ab/nsp658M58IatGatT11AY.10.000396
ORF1ab/nsp658M58IatGatA11AY.1000.000046
ORF1ab/nsp658M58IatGatT11AY.1060.000335
ORF1ab/nsp658M58IatGatT11AY.1080.001103
ORF1ab/nsp658M58IatGatA11AY.130.000161
ORF1ab/nsp658M58IatGatA11AY.230.00007
ORF1ab/nsp658M58IatGatA11AY.340.000097
ORF1ab/nsp658M58IatGatA11AY.4.50.000107
ORF1ab/nsp658M58IatGatT11AY.410.000294
ORF1ab/nsp658M58IatGatT11AY.46.20.000635
ORF1ab/nsp658M58IatGatT11AY.46.60.000072
ORF1ab/nsp658M58IatGatT11AY.5.40.000277
ORF1ab/nsp658M58IatGatT11AY.630.000387
ORF1ab/nsp658M58IatGatT11AY.690.000187
ORF1ab/nsp658M58IatGatT11AY.700.000209
ORF1ab/nsp658M58IatGatC11AY.800.001129
ORF1ab/nsp658M58IatGatT11AY.930.000273
ORF1ab/nsp658M58IatGatT11AY.99.10.001553
ORF1ab/nsp658M58IatGatT11B0.000128
ORF1ab/nsp658M58IatGatT11B.1.1.100.001115
ORF1ab/nsp658M58IatGatT11B.1.1.2940.001266
ORF1ab/nsp658M58IatGatT11B.1.1.3070.002532
ORF1ab/nsp658M58IatGatT11B.1.1.3350.012987
ORF1ab/nsp658M58IatGatT11B.1.1.3540.004386
ORF1ab/nsp658M58IatGatT11B.1.1.3550.015385
ORF1ab/nsp658M58IatGatA11B.1.1.390.00051
ORF1ab/nsp658M58IatGatT11B.1.1.5190.00004
ORF1ab/nsp658M58IatGatA11B.1.1110.001175
ORF1ab/nsp658M58IatGatT11B.1.120.008
ORF1ab/nsp658M58IatGatT11B.1.177.810.000189
ORF1ab/nsp658M58IatGatT11B.1.177.820.000477
ORF1ab/nsp658M58IatGatT11B.1.2060.000816
ORF1ab/nsp658M58IatGatT11B.1.2140.003663
ORF1ab/nsp658M58IatGatT11B.1.2340.000132
ORF1ab/nsp658M58IatGatT11B.1.2580.000067
ORF1ab/nsp658M58IatGatA11B.1.351.30.000876
ORF1ab/nsp658M58IatGatT11B.1.36.10.00114
ORF1ab/nsp658M58IatGatT11B.1.36.160.001425
ORF1ab/nsp658M58IatGatT11B.1.36.360.000602
ORF1ab/nsp658M58IatGatT11B.1.3970.004854
ORF1ab/nsp658M58IatGatT11B.1.4700.001404
ORF1ab/nsp658M58IatGatA11B.1.5250.000113
ORF1ab/nsp658M58IatGatT11B.1.5260.000024
ORF1ab/nsp658M58IatGatT11B.1.5600.00463
ORF1ab/nsp658M58IatGatT11B.1.5820.000491
ORF1ab/nsp658M58IatGatT11N.40.004255
ORF1ab/nsp658M58IatGatT11P.1.10.000318
ORF1ab/nsp658M58IatGatA11P.1.150.000232
ORF1ab/nsp658M58IatGatC11P.1.160.000374
ORF1ab/nsp658M58IatGatA11P.1.90.004808
ORF1ab/nsp658M58IatGatT11Q.20.000613