CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp6 | 75 | L75F | L3644F | nonsyn | Ctt | Ttt | 10407 | 10407 | 1 | 11195-11197 |
Details of the mutation L75F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 10407 | 10407 | All | 0.00199 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2634 | 2634 | B.1.1.7 | 0.002358 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2184 | 2184 | B.1.466.2 | 0.85446 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 601 | 601 | AY.4 | 0.000935 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 568 | 568 | B.1.1.51 | 0.975945 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 461 | 461 | AU.3 | 0.972574 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 403 | 403 | AU.2 | 0.975787 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 311 | 311 | B.1.1 | 0.005642 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 284 | 284 | P.1 | 0.004474 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 197 | 197 | AY.9.1 | 0.016494 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 154 | 154 | B.1.1.265 | 0.485804 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 153 | 153 | B.1.617.2 | 0.000576 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 107 | 107 | AY.91 | 0.078159 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 106 | 106 | B.1 | 0.000971 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 93 | 93 | B.1.1.349 | 0.958763 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 77 | 77 | B.1.429 | 0.001812 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 76 | 76 | B.1.36 | 0.011088 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 75 | 75 | AY.47 | 0.002333 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 69 | 69 | AY.99.2 | 0.006359 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 64 | 64 | P.1.7 | 0.020434 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 63 | 63 | AY.43 | 0.000279 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 63 | 63 | B.1.2 | 0.000555 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 62 | 62 | B.1.1.465 | 0.96875 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 60 | 60 | AY.25 | 0.000361 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 60 | 60 | B.1.1.526 | 0.212766 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 58 | 58 | AY.26 | 0.001642 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 58 | 58 | B.1.1.366 | 0.920635 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 56 | 56 | B.1.351 | 0.001665 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 54 | 54 | AY.3 | 0.000537 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 53 | 53 | AY.103 | 0.000329 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 52 | 52 | B.1.177 | 0.000685 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 41 | 41 | B.1.177.33 | 0.067434 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 39 | 39 | B.1.221 | 0.00277 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 38 | 38 | AY.30 | 0.015038 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 37 | 37 | Q.1 | 0.004674 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 36 | 36 | AY.4.2 | 0.000781 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 33 | 33 | AY.33 | 0.002204 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 33 | 33 | B.1.1.519 | 0.00131 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 32 | 32 | AY.44 | 0.000195 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 31 | 31 | AY.29 | 0.000489 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 28 | 28 | B.1.1.416 | 0.025339 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 26 | 26 | B.1.526 | 0.000611 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 25 | 25 | AY.39 | 0.000618 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 23 | 23 | B.1.241 | 0.018669 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 22 | 22 | R.1 | 0.00198 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 20 | 20 | B.1.36.29 | 0.010347 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 18 | 18 | B.1.517 | 0.007686 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 18 | 18 | B.1.609 | 0.008629 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 17 | 17 | B.1.1.214 | 0.000943 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 16 | 16 | B.1.596 | 0.001394 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 15 | 15 | AY.4.5 | 0.001612 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 14 | 14 | B.1.427 | 0.000707 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 13 | 13 | AY.5 | 0.000268 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 13 | 13 | B.1.160 | 0.000405 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 13 | 13 | B.1.462 | 0.094203 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 13 | 13 | B.1.474 | 0.024715 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 13 | 13 | B.1.575 | 0.003944 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 12 | 12 | B.1.456 | 0.039216 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 11 | 11 | AY.102 | 0.000292 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 11 | 11 | B.1.1.284 | 0.001181 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 11 | 11 | B.1.177.30 | 0.027638 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 10 | 10 | B.1.258.17 | 0.00104 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 9 | 9 | B.1.240 | 0.00194 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 9 | 9 | B.1.459 | 0.036735 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 9 | 9 | B.1.631 | 0.030303 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 9 | 9 | D.2 | 0.000675 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 8 | 8 | AY.100 | 0.000368 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 8 | 8 | AY.3.1 | 0.000682 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 8 | 8 | AY.46.5 | 0.001587 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 8 | 8 | AY.6 | 0.000329 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 8 | 8 | B.1.110 | 0.036199 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 8 | 8 | B.1.637 | 0.000585 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 7 | 7 | AY.119 | 0.000247 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 7 | 7 | AY.51 | 0.006364 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 7 | 7 | B.1.1.312 | 0.013384 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 7 | 7 | B.1.409 | 0.005469 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 7 | 7 | C.36.3 | 0.003971 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 7 | 7 | P.1.12 | 0.003388 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 7 | 7 | Q.8 | 0.001154 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 6 | 6 | A | 0.002322 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 6 | 6 | AY.4.2.1 | 0.000894 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 6 | 6 | B.1.1.255 | 0.018182 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 6 | 6 | B.1.234 | 0.000792 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 6 | 6 | B.1.258 | 0.000399 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 6 | 6 | B.1.621 | 0.000531 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 6 | 6 | P.1.14 | 0.000287 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 5 | 5 | B.1.1.273 | 0.033784 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 5 | 5 | B.1.1.318 | 0.001509 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 5 | 5 | B.1.1.434 | 0.001743 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 5 | 5 | B.1.1.50 | 0.003394 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 5 | 5 | B.1.160.8 | 0.006443 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 5 | 5 | B.1.369 | 0.001426 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 5 | 5 | B.1.469 | 0.018051 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 5 | 5 | B.1.525 | 0.000566 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 5 | 5 | B.1.564 | 0.002129 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 5 | 5 | B.1.595 | 0.001305 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 4 | 4 | AY.23 | 0.000279 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 4 | 4 | AY.27 | 0.000259 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 4 | 4 | AY.36 | 0.000593 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 4 | 4 | AY.45 | 0.000487 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 4 | 4 | B.1.1.222 | 0.000816 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 4 | 4 | B.1.1.398 | 0.012903 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 4 | 4 | B.1.1.417 | 0.010811 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 4 | 4 | B.1.177.4 | 0.000844 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 4 | 4 | B.1.36.36 | 0.002408 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 4 | 4 | B.1.438.1 | 0.000429 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 4 | 4 | B.1.509 | 0.003463 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 4 | 4 | C.36 | 0.003643 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 4 | 4 | C.37 | 0.000464 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 3 | 3 | AY.10 | 0.00159 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 3 | 3 | AY.120 | 0.000112 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 3 | 3 | AY.42 | 0.000121 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 3 | 3 | AY.46 | 0.000312 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 3 | 3 | AY.9.2 | 0.00011 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 3 | 3 | AY.98 | 0.000237 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 3 | 3 | B.1.1.28 | 0.000934 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 3 | 3 | B.1.1.368 | 0.009259 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 3 | 3 | B.1.1.58 | 0.016129 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 3 | 3 | B.1.177.17 | 0.002463 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 3 | 3 | B.1.222 | 0.005076 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 3 | 3 | B.1.362 | 0.004622 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 3 | 3 | B.1.497 | 0.000944 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 3 | 3 | B.1.619 | 0.002613 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 3 | 3 | P.1.17 | 0.000485 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 3 | 3 | P.2 | 0.00056 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | AY.113 | 0.000285 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | AY.117 | 0.000169 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | AY.13 | 0.000322 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | AY.20 | 0.000078 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | AY.29.1 | 0.000441 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | AY.55 | 0.001835 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | AY.61 | 0.00021 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | AY.74 | 0.000231 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | AY.75 | 0.000112 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | AY.98.1 | 0.000097 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | B.1.1.263 | 0.003115 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | B.1.1.356 | 0.017094 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | B.1.1.409 | 0.005666 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | B.1.177.9 | 0.002663 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | B.1.206 | 0.001631 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | B.1.221.3 | 0.001667 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | B.1.243 | 0.000139 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | B.1.258.14 | 0.001961 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | B.1.279 | 0.001027 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | B.1.349 | 0.00143 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | B.1.361 | 0.002577 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | B.1.375 | 0.001639 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | B.1.415.1 | 0.015152 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | B.1.426 | 0.002018 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | B.1.480 | 0.004975 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | B.1.601 | 0.060606 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | B.1.617.1 | 0.000258 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | B.1.91 | 0.004149 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | B.6 | 0.00182 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 2 | 2 | P.1.13 | 0.001797 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | 0.055556 | |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | A.11 | 0.058824 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | AE.8 | 0.000489 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | AY.109 | 0.00074 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | AY.39.1.1 | 0.000725 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | AY.40 | 0.000964 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | AY.48 | 0.000465 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | AY.58 | 0.000907 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B | 0.000128 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.1.198 | 0.001468 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.1.224 | 0.014286 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.1.254 | 0.011236 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.1.274 | 0.005051 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.1.332 | 0.03125 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.1.344 | 0.010753 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.1.389 | 0.006061 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.1.466 | 0.008696 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.1.484 | 0.1 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.1.486 | 0.001577 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.1.523 | 0.001563 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.1.525 | 0.005464 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.177.52 | 0.001757 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.177.54 | 0.000606 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.177.56 | 0.000668 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.177.58 | 0.001332 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.177.69 | 0.001484 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.177.82 | 0.000477 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.177.87 | 0.000728 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.195 | 0.005025 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.214 | 0.003663 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.214.2 | 0.0006 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.258.7 | 0.001912 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.320 | 0.001245 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.329 | 0.000608 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.36.16 | 0.001425 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.36.2 | 0.010753 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.366 | 0.004878 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.380 | 0.006623 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.460 | 0.017857 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.495 | 0.009091 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.530 | 0.007143 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.627 | 0.00202 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | B.1.9.5 | 0.005682 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | C.9 | 0.030303 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | P.1.16 | 0.000374 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | P.1.2 | 0.001156 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | Q.4 | 0.000455 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | W.1 | 0.008696 |
ORF1ab/nsp6 | 75 | L75F | Ctt | Ttt | 1 | 1 | W.4 | 0.001351 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
|