CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : Mut = L260L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp6260L260LL3829LsynctCctT260224810.95349711750-11752
ORF1ab/nsp6260L260LL3829LsynctCctA26021190.045734111750-11752
ORF1ab/nsp6260L260LL3829LsynctCctG260220.00076863911750-11752

Details of the mutation L260L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp6260L260LctCctT24812602All0.000475
ORF1ab/nsp6260L260LctCctA1192602All0.000023
ORF1ab/nsp6260L260LctCctG22602All0
ORF1ab/nsp6260L260LctCctT352352P.10.005545
ORF1ab/nsp6260L260LctCctT275276AY.40.000428
ORF1ab/nsp6260L260LctCctA1276AY.40.000002
ORF1ab/nsp6260L260LctCctT265274B.1.1.70.000237
ORF1ab/nsp6260L260LctCctA9274B.1.1.70.000008
ORF1ab/nsp6260L260LctCctT222231B.1.4290.005223
ORF1ab/nsp6260L260LctCctA9231B.1.4290.000212
ORF1ab/nsp6260L260LctCctT156156B.121
ORF1ab/nsp6260L260LctCctT103106B.1.20.000907
ORF1ab/nsp6260L260LctCctA3106B.1.20.000026
ORF1ab/nsp6260L260LctCctT8286AY.250.000493
ORF1ab/nsp6260L260LctCctA486AY.250.000024
ORF1ab/nsp6260L260LctCctT6278B.1.617.20.000233
ORF1ab/nsp6260L260LctCctA1578B.1.617.20.000056
ORF1ab/nsp6260L260LctCctG178B.1.617.20.000004
ORF1ab/nsp6260L260LctCctT6565B.1.1.3180.019614
ORF1ab/nsp6260L260LctCctT5159B.10.000467
ORF1ab/nsp6260L260LctCctA759B.10.000064
ORF1ab/nsp6260L260LctCctG159B.10.000009
ORF1ab/nsp6260L260LctCctT5457AY.430.000239
ORF1ab/nsp6260L260LctCctA357AY.430.000013
ORF1ab/nsp6260L260LctCctT3150B.1.10.000562
ORF1ab/nsp6260L260LctCctA1950B.1.10.000345
ORF1ab/nsp6260L260LctCctT3539AY.440.000213
ORF1ab/nsp6260L260LctCctA439AY.440.000024
ORF1ab/nsp6260L260LctCctT3535AY.50.000723
ORF1ab/nsp6260L260LctCctT2433AY.1030.000149
ORF1ab/nsp6260L260LctCctA933AY.1030.000056
ORF1ab/nsp6260L260LctCctT3232AY.260.000906
ORF1ab/nsp6260L260LctCctT3032AY.30.000298
ORF1ab/nsp6260L260LctCctA232AY.30.00002
ORF1ab/nsp6260L260LctCctT3030C.350.02322
ORF1ab/nsp6260L260LctCctT2929B.1.1770.000382
ORF1ab/nsp6260L260LctCctT2929P.1.70.009259
ORF1ab/nsp6260L260LctCctT2222B.1.2210.001563
ORF1ab/nsp6260L260LctCctT2121AY.1100.002366
ORF1ab/nsp6260L260LctCctT2020B.1.177.830.02963
ORF1ab/nsp6260L260LctCctT1819B.1.360.002626
ORF1ab/nsp6260L260LctCctA119B.1.360.000146
ORF1ab/nsp6260L260LctCctT1517AY.470.000467
ORF1ab/nsp6260L260LctCctA217AY.470.000062
ORF1ab/nsp6260L260LctCctT1717AY.98.10.000823
ORF1ab/nsp6260L260LctCctT1515AY.420.000603
ORF1ab/nsp6260L260LctCctT1414B.1.1.2200.026022
ORF1ab/nsp6260L260LctCctT1313AY.1000.000598
ORF1ab/nsp6260L260LctCctT1313AY.200.000505
ORF1ab/nsp6260L260LctCctT1313B.1.1600.000405
ORF1ab/nsp6260L260LctCctT1313B.1.5950.003392
ORF1ab/nsp6260L260LctCctT1212AY.1180.000752
ORF1ab/nsp6260L260LctCctT1212AY.380.005991
ORF1ab/nsp6260L260LctCctT1212B.1.177.540.007277
ORF1ab/nsp6260L260LctCctT1111B.1.5260.000259
ORF1ab/nsp6260L260LctCctT1010B.1.258.30.01675
ORF1ab/nsp6260L260LctCctA79C.360.006375
ORF1ab/nsp6260L260LctCctT29C.360.001821
ORF1ab/nsp6260L260LctCctT78B.1.6370.000512
ORF1ab/nsp6260L260LctCctA18B.1.6370.000073
ORF1ab/nsp6260L260LctCctT88P.1.120.003872
ORF1ab/nsp6260L260LctCctT67AY.290.000095
ORF1ab/nsp6260L260LctCctA17AY.290.000016
ORF1ab/nsp6260L260LctCctT77B.1.1.5190.000278
ORF1ab/nsp6260L260LctCctT77B.1.177.860.001284
ORF1ab/nsp6260L260LctCctT66AY.1190.000212
ORF1ab/nsp6260L260LctCctT66AY.4.20.00013
ORF1ab/nsp6260L260LctCctT55AY.90.000338
ORF1ab/nsp6260L260LctCctT55AY.9.20.000184
ORF1ab/nsp6260L260LctCctT55AY.99.20.000461
ORF1ab/nsp6260L260LctCctT45B.1.2430.000278
ORF1ab/nsp6260L260LctCctA15B.1.2430.00007
ORF1ab/nsp6260L260LctCctT55B.1.5250.000566
ORF1ab/nsp6260L260LctCctT35B.1.5960.000261
ORF1ab/nsp6260L260LctCctA25B.1.5960.000174
ORF1ab/nsp6260L260LctCctT55P.20.000933
ORF1ab/nsp6260L260LctCctT34AY.230.000209
ORF1ab/nsp6260L260LctCctA14AY.230.00007
ORF1ab/nsp6260L260LctCctT44AY.3.10.000341
ORF1ab/nsp6260L260LctCctT44AY.390.000099
ORF1ab/nsp6260L260LctCctA34AY.750.000168
ORF1ab/nsp6260L260LctCctT14AY.750.000056
ORF1ab/nsp6260L260LctCctT44B.1.2390.004884
ORF1ab/nsp6260L260LctCctT44B.1.3980.011905
ORF1ab/nsp6260L260LctCctT44B.1.4040.005208
ORF1ab/nsp6260L260LctCctT44B.1.617.10.000516
ORF1ab/nsp6260L260LctCctT44P.1.150.000929
ORF1ab/nsp6260L260LctCctT44Q.20.002454
ORF1ab/nsp6260L260LctCctT44Q.30.00058
ORF1ab/nsp6260L260LctCctT34Q.80.000495
ORF1ab/nsp6260L260LctCctA14Q.80.000165
ORF1ab/nsp6260L260LctCctT33A.2.50.001497
ORF1ab/nsp6260L260LctCctT33AY.360.000445
ORF1ab/nsp6260L260LctCctT33AY.39.10.000119
ORF1ab/nsp6260L260LctCctT33AY.450.000365
ORF1ab/nsp6260L260LctCctT33B.1.1.2840.000322
ORF1ab/nsp6260L260LctCctT33B.1.1.3150.025424
ORF1ab/nsp6260L260LctCctT33B.1.1.5230.004687
ORF1ab/nsp6260L260LctCctT33B.1.177.430.004431
ORF1ab/nsp6260L260LctCctT33B.1.177.570.000843
ORF1ab/nsp6260L260LctCctA33B.30.002492
ORF1ab/nsp6260L260LctCctT33C.370.000348
ORF1ab/nsp6260L260LctCctT33Q.10.000379
ORF1ab/nsp6260L260LctCctT22AY.1020.000053
ORF1ab/nsp6260L260LctCctT22AY.1200.000074
ORF1ab/nsp6260L260LctCctT22AY.1210.000271
ORF1ab/nsp6260L260LctCctT22AY.140.000176
ORF1ab/nsp6260L260LctCctA12AY.330.000067
ORF1ab/nsp6260L260LctCctT12AY.330.000067
ORF1ab/nsp6260L260LctCctT22AY.46.60.000144
ORF1ab/nsp6260L260LctCctT22AY.60.000082
ORF1ab/nsp6260L260LctCctA22AY.610.00021
ORF1ab/nsp6260L260LctCctT22AY.620.000871
ORF1ab/nsp6260L260LctCctT22B0.000256
ORF1ab/nsp6260L260LctCctT22B.1.1.10.000653
ORF1ab/nsp6260L260LctCctT22B.1.1.1210.004854
ORF1ab/nsp6260L260LctCctT22B.1.1.330.000842
ORF1ab/nsp6260L260LctCctT22B.1.1.3330.002153
ORF1ab/nsp6260L260LctCctT22B.1.1.390.001019
ORF1ab/nsp6260L260LctCctT22B.1.1.3980.006452
ORF1ab/nsp6260L260LctCctT22B.1.160.280.005848
ORF1ab/nsp6260L260LctCctT22B.1.177.100.001756
ORF1ab/nsp6260L260LctCctA22B.1.177.690.002967
ORF1ab/nsp6260L260LctCctT22B.1.2340.000264
ORF1ab/nsp6260L260LctCctA12B.1.2580.000067
ORF1ab/nsp6260L260LctCctT12B.1.2580.000067
ORF1ab/nsp6260L260LctCctT12B.1.258.170.000104
ORF1ab/nsp6260L260LctCctA12B.1.258.170.000104
ORF1ab/nsp6260L260LctCctT22B.1.3510.000059
ORF1ab/nsp6260L260LctCctT22B.1.36.270.001527
ORF1ab/nsp6260L260LctCctT22B.1.4560.006536
ORF1ab/nsp6260L260LctCctT22B.1.466.20.000782
ORF1ab/nsp6260L260LctCctT22B.1.5750.000607
ORF1ab/nsp6260L260LctCctT22B.1.619.10.001283
ORF1ab/nsp6260L260LctCctT22B.1.6210.000177
ORF1ab/nsp6260L260LctCctT22D.20.00015
ORF1ab/nsp6260L260LctCctT22R.10.00018
ORF1ab/nsp6260L260LctCctT11A.2.5.20.001572
ORF1ab/nsp6260L260LctCctT11AM.40.003571
ORF1ab/nsp6260L260LctCctT11AY.1110.000183
ORF1ab/nsp6260L260LctCctT11AY.1160.000287
ORF1ab/nsp6260L260LctCctT11AY.1170.000085
ORF1ab/nsp6260L260LctCctA11AY.16.10.00047
ORF1ab/nsp6260L260LctCctT11AY.270.000065
ORF1ab/nsp6260L260LctCctT11AY.350.000233
ORF1ab/nsp6260L260LctCctT11AY.39.1.10.000725
ORF1ab/nsp6260L260LctCctT11AY.4.2.10.000149
ORF1ab/nsp6260L260LctCctA11AY.4.50.000107
ORF1ab/nsp6260L260LctCctT11AY.540.000095
ORF1ab/nsp6260L260LctCctT11AY.580.000907
ORF1ab/nsp6260L260LctCctT11AY.660.00107
ORF1ab/nsp6260L260LctCctT11AY.680.000274
ORF1ab/nsp6260L260LctCctT11AY.70.000196
ORF1ab/nsp6260L260LctCctT11AY.9.10.000084
ORF1ab/nsp6260L260LctCctT11AY.930.000273
ORF1ab/nsp6260L260LctCctT11AY.940.000443
ORF1ab/nsp6260L260LctCctT11B.1.1.1710.003676
ORF1ab/nsp6260L260LctCctT11B.1.1.2140.000055
ORF1ab/nsp6260L260LctCctT11B.1.1.2220.000204
ORF1ab/nsp6260L260LctCctT11B.1.1.270.00565
ORF1ab/nsp6260L260LctCctT11B.1.1.2720.005208
ORF1ab/nsp6260L260LctCctT11B.1.1.3070.002532
ORF1ab/nsp6260L260LctCctT11B.1.1.370.000193
ORF1ab/nsp6260L260LctCctT11B.1.1.3730.02381
ORF1ab/nsp6260L260LctCctA11B.1.1.480.002874
ORF1ab/nsp6260L260LctCctT11B.1.1.500.000679
ORF1ab/nsp6260L260LctCctT11B.1.1.5210.005348
ORF1ab/nsp6260L260LctCctT11B.1.1.560.017857
ORF1ab/nsp6260L260LctCctT11B.1.1580.02381
ORF1ab/nsp6260L260LctCctT11B.1.160.150.00495
ORF1ab/nsp6260L260LctCctT11B.1.177.210.000076
ORF1ab/nsp6260L260LctCctT11B.1.177.600.000218
ORF1ab/nsp6260L260LctCctT11B.1.177.650.000665
ORF1ab/nsp6260L260LctCctT11B.1.177.870.000728
ORF1ab/nsp6260L260LctCctT11B.1.1890.004292
ORF1ab/nsp6260L260LctCctT11B.1.1920.009259
ORF1ab/nsp6260L260LctCctA11B.1.221.40.004167
ORF1ab/nsp6260L260LctCctT11B.1.2360.002053
ORF1ab/nsp6260L260LctCctT11B.1.3150.006061
ORF1ab/nsp6260L260LctCctT11B.1.3480.018182
ORF1ab/nsp6260L260LctCctT11B.1.36.10.00114
ORF1ab/nsp6260L260LctCctT11B.1.3670.000792
ORF1ab/nsp6260L260LctCctT11B.1.4000.000429
ORF1ab/nsp6260L260LctCctT11B.1.4090.000781
ORF1ab/nsp6260L260LctCctT11B.1.4680.005714
ORF1ab/nsp6260L260LctCctT11B.1.4780.011765
ORF1ab/nsp6260L260LctCctT11B.1.4970.000315
ORF1ab/nsp6260L260LctCctT11B.1.5270.003704
ORF1ab/nsp6260L260LctCctT11B.1.5660.019231
ORF1ab/nsp6260L260LctCctT11B.1.5820.000491
ORF1ab/nsp6260L260LctCctT11B.1.5870.001898
ORF1ab/nsp6260L260LctCctT11B.1.6250.002353
ORF1ab/nsp6260L260LctCctT11B.1.6280.000352
ORF1ab/nsp6260L260LctCctT11B.290.003509
ORF1ab/nsp6260L260LctCctT11B.6.60.000889
ORF1ab/nsp6260L260LctCctT11P.1.170.000162
ORF1ab/nsp6260L260LctCctT11W.30.005263