CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : Mut = L146L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp6146L146LL3715LsynttGttA4203130.74523811408-11410
ORF1ab/nsp6146L146LL3715LsynTtgCtg4201040.24761911408-11410
ORF1ab/nsp6146L146LL3715LsynTtGCtA42030.0071428611408-11410

Details of the mutation L146L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp6146L146LttGttA313420All0.00006
ORF1ab/nsp6146L146LTtgCtg104420All0.00002
ORF1ab/nsp6146L146LTtGCtA3420All0.000001
ORF1ab/nsp6146L146LttGttA198198B.1.1.2190.99
ORF1ab/nsp6146L146LTtgCtg3650B.1.1.70.000032
ORF1ab/nsp6146L146LttGttA1450B.1.1.70.000013
ORF1ab/nsp6146L146LttGttA1933AY.40.00003
ORF1ab/nsp6146L146LTtgCtg1433AY.40.000022
ORF1ab/nsp6146L146LTtgCtg1216AY.1030.000075
ORF1ab/nsp6146L146LttGttA416AY.1030.000025
ORF1ab/nsp6146L146LttGttA1010B0.001278
ORF1ab/nsp6146L146LttGttA99B.1.1.2790.01009
ORF1ab/nsp6146L146LTtgCtg88B.1.6090.003835
ORF1ab/nsp6146L146LttGttA67B.1.10.000109
ORF1ab/nsp6146L146LTtgCtg17B.1.10.000018
ORF1ab/nsp6146L146LttGttA37B.1.617.20.000011
ORF1ab/nsp6146L146LTtgCtg37B.1.617.20.000011
ORF1ab/nsp6146L146LTtGCtA17B.1.617.20.000004
ORF1ab/nsp6146L146LttGttA47P.10.000063
ORF1ab/nsp6146L146LTtgCtg37P.10.000047
ORF1ab/nsp6146L146LTtGCtA260.111111
ORF1ab/nsp6146L146LttGttA260.111111
ORF1ab/nsp6146L146LTtgCtg260.111111
ORF1ab/nsp6146L146LttGttA66AY.30.00006
ORF1ab/nsp6146L146LttGttA46B.10.000037
ORF1ab/nsp6146L146LTtgCtg26B.10.000018
ORF1ab/nsp6146L146LttGttA45AY.1180.000251
ORF1ab/nsp6146L146LTtgCtg15AY.1180.000063
ORF1ab/nsp6146L146LttGttA55AY.98.10.000242
ORF1ab/nsp6146L146LttGttA24B.1.1.5190.000079
ORF1ab/nsp6146L146LTtgCtg24B.1.1.5190.000079
ORF1ab/nsp6146L146LTtgCtg23AY.1020.000053
ORF1ab/nsp6146L146LttGttA13AY.1020.000027
ORF1ab/nsp6146L146LttGttA33AY.430.000013
ORF1ab/nsp6146L146LttGttA33B.1.1.4340.001046
ORF1ab/nsp6146L146LttGttA33B.1.36.290.001552
ORF1ab/nsp6146L146LTtgCtg12AY.250.000006
ORF1ab/nsp6146L146LttGttA12AY.250.000006
ORF1ab/nsp6146L146LTtgCtg22AY.270.000129
ORF1ab/nsp6146L146LttGttA11AV.10.005051
ORF1ab/nsp6146L146LttGttA11AY.100.00053
ORF1ab/nsp6146L146LTtgCtg11AY.1140.000231
ORF1ab/nsp6146L146LTtgCtg11AY.230.00007
ORF1ab/nsp6146L146LttGttA11AY.240.000431
ORF1ab/nsp6146L146LTtgCtg11AY.260.000028
ORF1ab/nsp6146L146LttGttA11AY.290.000016
ORF1ab/nsp6146L146LTtgCtg11AY.330.000067
ORF1ab/nsp6146L146LttGttA11AY.360.000148
ORF1ab/nsp6146L146LttGttA11AY.450.000122
ORF1ab/nsp6146L146LTtgCtg11AY.460.000104
ORF1ab/nsp6146L146LTtgCtg11AY.46.40.000165
ORF1ab/nsp6146L146LTtgCtg11AY.50.000021
ORF1ab/nsp6146L146LTtgCtg11AY.610.000105
ORF1ab/nsp6146L146LttGttA11AY.7.20.000559
ORF1ab/nsp6146L146LTtgCtg11AY.840.000437
ORF1ab/nsp6146L146LTtgCtg11B.1.1.250.000569
ORF1ab/nsp6146L146LTtgCtg11B.1.1570.002985
ORF1ab/nsp6146L146LttGttA11B.1.1770.000013
ORF1ab/nsp6146L146LTtgCtg11B.1.2210.000071
ORF1ab/nsp6146L146LttGttA11B.1.2340.000132
ORF1ab/nsp6146L146LttGttA11B.1.3620.001541
ORF1ab/nsp6146L146LTtgCtg11B.1.4700.001404
ORF1ab/nsp6146L146LttGttA11B.1.5250.000113
ORF1ab/nsp6146L146LTtgCtg11B.1.5880.00091
ORF1ab/nsp6146L146LTtgCtg11B.30.000831
ORF1ab/nsp6146L146LttGttA11P.20.000187