CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : Mut = L142L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp6142L142LL3711LsynctTctC1321080.81818211396-11398
ORF1ab/nsp6142L142LL3711LsynctTctA132130.098484911396-11398
ORF1ab/nsp6142L142LL3711LsynctTctG132100.075757611396-11398
ORF1ab/nsp6142L142LL3711LsynCtTTtG13210.0075757611396-11398

Details of the mutation L142L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp6142L142LctTctC108132All0.000021
ORF1ab/nsp6142L142LctTctA13132All0.000002
ORF1ab/nsp6142L142LctTctG10132All0.000002
ORF1ab/nsp6142L142LCtTTtG1132All0
ORF1ab/nsp6142L142LctTctC3134B.1.1.70.000028
ORF1ab/nsp6142L142LctTctG334B.1.1.70.000003
ORF1ab/nsp6142L142LctTctA612AY.40.000009
ORF1ab/nsp6142L142LctTctC512AY.40.000008
ORF1ab/nsp6142L142LctTctG112AY.40.000002
ORF1ab/nsp6142L142LctTctC912B.10.000082
ORF1ab/nsp6142L142LctTctG212B.10.000018
ORF1ab/nsp6142L142LctTctA112B.10.000009
ORF1ab/nsp6142L142LctTctC810B.1.617.20.00003
ORF1ab/nsp6142L142LctTctA210B.1.617.20.000008
ORF1ab/nsp6142L142LctTctC88AY.1200.000297
ORF1ab/nsp6142L142LctTctC78AY.440.000043
ORF1ab/nsp6142L142LctTctG18AY.440.000006
ORF1ab/nsp6142L142LctTctC56B.1.10.000091
ORF1ab/nsp6142L142LctTctA16B.1.10.000018
ORF1ab/nsp6142L142LctTctC55AY.260.000142
ORF1ab/nsp6142L142LctTctC25AY.430.000009
ORF1ab/nsp6142L142LctTctA25AY.430.000009
ORF1ab/nsp6142L142LCtTTtG15AY.430.000004
ORF1ab/nsp6142L142LctTctC55B.1.1.5190.000199
ORF1ab/nsp6142L142LctTctC33B.1.4290.000071
ORF1ab/nsp6142L142LctTctC22B.1.5260.000047
ORF1ab/nsp6142L142LctTctC22P.10.000032
ORF1ab/nsp6142L142LctTctC11A0.000387
ORF1ab/nsp6142L142LctTctC11AY.1000.000046
ORF1ab/nsp6142L142LctTctC11AY.1020.000027
ORF1ab/nsp6142L142LctTctC11AY.1030.000006
ORF1ab/nsp6142L142LctTctC11AY.120.10.000321
ORF1ab/nsp6142L142LctTctC11AY.420.00004
ORF1ab/nsp6142L142LctTctC11AY.50.000021
ORF1ab/nsp6142L142LctTctG11AY.590.00053
ORF1ab/nsp6142L142LctTctC11AY.75.10.00018
ORF1ab/nsp6142L142LctTctC11AY.9.20.000037
ORF1ab/nsp6142L142LctTctC11B.1.1.2200.001859
ORF1ab/nsp6142L142LctTctG11B.1.1.280.000311
ORF1ab/nsp6142L142LctTctC11B.1.20.000009
ORF1ab/nsp6142L142LctTctG11B.1.3510.00003
ORF1ab/nsp6142L142LctTctC11B.1.36.350.002604
ORF1ab/nsp6142L142LctTctC11B.1.3690.000285
ORF1ab/nsp6142L142LctTctA11B.1.5130.013889
ORF1ab/nsp6142L142LctTctC11B.1.5250.000113
ORF1ab/nsp6142L142LctTctC11B.400.000364
ORF1ab/nsp6142L142LctTctC11Q.40.000455