CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : Mut = L142F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp6142L142FL3711FnonsynCttTtt89198919111396-11398

Details of the mutation L142F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp6142L142FCttTtt89198919All0.001706
ORF1ab/nsp6142L142FCttTtt74927492B.1.1770.098652
ORF1ab/nsp6142L142FCttTtt190190AY.440.001156
ORF1ab/nsp6142L142FCttTtt131131B.1.177.671
ORF1ab/nsp6142L142FCttTtt125125B.1.1.70.000112
ORF1ab/nsp6142L142FCttTtt122122B.1.617.20.000459
ORF1ab/nsp6142L142FCttTtt8484B.1.1600.00262
ORF1ab/nsp6142L142FCttTtt7373AY.40.000114
ORF1ab/nsp6142L142FCttTtt7070B.1.2210.004972
ORF1ab/nsp6142L142FCttTtt6666B.1.177.470.857143
ORF1ab/nsp6142L142FCttTtt5252B.1.2340.006861
ORF1ab/nsp6142L142FCttTtt4747B.10.00043
ORF1ab/nsp6142L142FCttTtt4141P.10.000646
ORF1ab/nsp6142L142FCttTtt2626AY.1030.000161
ORF1ab/nsp6142L142FCttTtt2424B.1.177.661
ORF1ab/nsp6142L142FCttTtt2121B.1.264.11
ORF1ab/nsp6142L142FCttTtt1818AY.430.00008
ORF1ab/nsp6142L142FCttTtt1818B.1.20.000158
ORF1ab/nsp6142L142FCttTtt1313AY.290.000205
ORF1ab/nsp6142L142FCttTtt1212B.1.1990.049587
ORF1ab/nsp6142L142FCttTtt1212B.1.3290.00729
ORF1ab/nsp6142L142FCttTtt1212B.1.4290.000282
ORF1ab/nsp6142L142FCttTtt1111AY.250.000066
ORF1ab/nsp6142L142FCttTtt1111B.1.10.0002
ORF1ab/nsp6142L142FCttTtt1111B.1.3360.026829
ORF1ab/nsp6142L142FCttTtt1010B.1.5260.000235
ORF1ab/nsp6142L142FCttTtt88AY.1180.000501
ORF1ab/nsp6142L142FCttTtt88AY.1200.000297
ORF1ab/nsp6142L142FCttTtt88B.1.466.20.00313
ORF1ab/nsp6142L142FCttTtt77B.1.1.2160.006233
ORF1ab/nsp6142L142FCttTtt77B.1.1.3180.002112
ORF1ab/nsp6142L142FCttTtt77B.1.3510.000208
ORF1ab/nsp6142L142FCttTtt66AY.30.00006
ORF1ab/nsp6142L142FCttTtt66AY.980.000474
ORF1ab/nsp6142L142FCttTtt55AY.1000.00023
ORF1ab/nsp6142L142FCttTtt55B.1.1.5190.000199
ORF1ab/nsp6142L142FCttTtt55B.1.177.70.000824
ORF1ab/nsp6142L142FCttTtt55B.1.351.20.001513
ORF1ab/nsp6142L142FCttTtt44AY.1170.000338
ORF1ab/nsp6142L142FCttTtt44AY.200.000155
ORF1ab/nsp6142L142FCttTtt44B.1.3140.030075
ORF1ab/nsp6142L142FCttTtt44B.1.5250.000453
ORF1ab/nsp6142L142FCttTtt33A.20.001985
ORF1ab/nsp6142L142FCttTtt33AY.39.10.000119
ORF1ab/nsp6142L142FCttTtt33AY.420.000121
ORF1ab/nsp6142L142FCttTtt33AY.610.000314
ORF1ab/nsp6142L142FCttTtt33B.1.360.000438
ORF1ab/nsp6142L142FCttTtt33B.1.3690.000856
ORF1ab/nsp6142L142FCttTtt22AY.1140.000462
ORF1ab/nsp6142L142FCttTtt22AY.1190.000071
ORF1ab/nsp6142L142FCttTtt22AY.130.000322
ORF1ab/nsp6142L142FCttTtt22AY.230.000139
ORF1ab/nsp6142L142FCttTtt22AY.390.000049
ORF1ab/nsp6142L142FCttTtt22AY.4.20.000043
ORF1ab/nsp6142L142FCttTtt22AY.540.000191
ORF1ab/nsp6142L142FCttTtt22AY.60.000082
ORF1ab/nsp6142L142FCttTtt22AY.90.000135
ORF1ab/nsp6142L142FCttTtt22AY.99.20.000184
ORF1ab/nsp6142L142FCttTtt22B.1.1.1370.025
ORF1ab/nsp6142L142FCttTtt22B.1.1.330.000842
ORF1ab/nsp6142L142FCttTtt22B.1.1.5180.012658
ORF1ab/nsp6142L142FCttTtt22B.1.1080.011628
ORF1ab/nsp6142L142FCttTtt22B.1.177.210.000153
ORF1ab/nsp6142L142FCttTtt22B.1.177.630.005405
ORF1ab/nsp6142L142FCttTtt22B.1.177.650.001331
ORF1ab/nsp6142L142FCttTtt22B.1.177.80.001505
ORF1ab/nsp6142L142FCttTtt22B.1.177.860.000367
ORF1ab/nsp6142L142FCttTtt22B.1.36.270.001527
ORF1ab/nsp6142L142FCttTtt22B.1.36.290.001035
ORF1ab/nsp6142L142FCttTtt22B.1.4270.000101
ORF1ab/nsp6142L142FCttTtt22B.1.5650.001621
ORF1ab/nsp6142L142FCttTtt22C.36.30.001134
ORF1ab/nsp6142L142FCttTtt22D.20.00015
ORF1ab/nsp6142L142FCttTtt22P.1.140.000096
ORF1ab/nsp6142L142FCttTtt22P.60.006289
ORF1ab/nsp6142L142FCttTtt11A.2.5.20.001572
ORF1ab/nsp6142L142FCttTtt11AY.1020.000027
ORF1ab/nsp6142L142FCttTtt11AY.1070.000466
ORF1ab/nsp6142L142FCttTtt11AY.1110.000183
ORF1ab/nsp6142L142FCttTtt11AY.330.000067
ORF1ab/nsp6142L142FCttTtt11AY.340.000097
ORF1ab/nsp6142L142FCttTtt11AY.360.000148
ORF1ab/nsp6142L142FCttTtt11AY.4.50.000107
ORF1ab/nsp6142L142FCttTtt11AY.450.000122
ORF1ab/nsp6142L142FCttTtt11AY.460.000104
ORF1ab/nsp6142L142FCttTtt11AY.46.10.001027
ORF1ab/nsp6142L142FCttTtt11AY.46.30.000934
ORF1ab/nsp6142L142FCttTtt11AY.470.000031
ORF1ab/nsp6142L142FCttTtt11AY.480.000465
ORF1ab/nsp6142L142FCttTtt11AY.5.30.000337
ORF1ab/nsp6142L142FCttTtt11AY.830.001724
ORF1ab/nsp6142L142FCttTtt11AY.850.000427
ORF1ab/nsp6142L142FCttTtt11AY.860.00083
ORF1ab/nsp6142L142FCttTtt11AY.920.000287
ORF1ab/nsp6142L142FCttTtt11B0.000128
ORF1ab/nsp6142L142FCttTtt11B.1.1.1130.006993
ORF1ab/nsp6142L142FCttTtt11B.1.1.1350.004695
ORF1ab/nsp6142L142FCttTtt11B.1.1.1570.000913
ORF1ab/nsp6142L142FCttTtt11B.1.1.1760.000439
ORF1ab/nsp6142L142FCttTtt11B.1.1.2140.000055
ORF1ab/nsp6142L142FCttTtt11B.1.1.2770.000759
ORF1ab/nsp6142L142FCttTtt11B.1.1.2840.000107
ORF1ab/nsp6142L142FCttTtt11B.1.1.3150.008475
ORF1ab/nsp6142L142FCttTtt11B.1.1.3290.003846
ORF1ab/nsp6142L142FCttTtt11B.1.1.3480.000796
ORF1ab/nsp6142L142FCttTtt11B.1.1.4200.001006
ORF1ab/nsp6142L142FCttTtt11B.1.1.4340.000349
ORF1ab/nsp6142L142FCttTtt11B.1.1.4480.002033
ORF1ab/nsp6142L142FCttTtt11B.1.1.4640.001473
ORF1ab/nsp6142L142FCttTtt11B.1.1.570.011494
ORF1ab/nsp6142L142FCttTtt11B.1.1.990.02381
ORF1ab/nsp6142L142FCttTtt11B.1.1460.004237
ORF1ab/nsp6142L142FCttTtt11B.1.177.150.000631
ORF1ab/nsp6142L142FCttTtt11B.1.177.310.011494
ORF1ab/nsp6142L142FCttTtt11B.1.177.530.002392
ORF1ab/nsp6142L142FCttTtt11B.1.177.560.000668
ORF1ab/nsp6142L142FCttTtt11B.1.177.570.000281
ORF1ab/nsp6142L142FCttTtt11B.1.177.60.000977
ORF1ab/nsp6142L142FCttTtt11B.1.177.720.00339
ORF1ab/nsp6142L142FCttTtt11B.1.2640.012346
ORF1ab/nsp6142L142FCttTtt11B.1.3050.002151
ORF1ab/nsp6142L142FCttTtt11B.1.36.390.002217
ORF1ab/nsp6142L142FCttTtt11B.1.3770.004566
ORF1ab/nsp6142L142FCttTtt11B.1.3960.000706
ORF1ab/nsp6142L142FCttTtt11B.1.4620.007246
ORF1ab/nsp6142L142FCttTtt11B.1.4690.00361
ORF1ab/nsp6142L142FCttTtt11B.1.4700.001404
ORF1ab/nsp6142L142FCttTtt11B.1.5740.002151
ORF1ab/nsp6142L142FCttTtt11B.1.5760.000907
ORF1ab/nsp6142L142FCttTtt11B.1.5820.000491
ORF1ab/nsp6142L142FCttTtt11B.1.5950.000261
ORF1ab/nsp6142L142FCttTtt11B.1.5960.000087
ORF1ab/nsp6142L142FCttTtt11B.1.6180.004032
ORF1ab/nsp6142L142FCttTtt11C.370.000116
ORF1ab/nsp6142L142FCttTtt11C.40.01
ORF1ab/nsp6142L142FCttTtt11Q.80.000165
ORF1ab/nsp6142L142FCttTtt11Z.10.00289