CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp6 | 11 | H11Y | H3580Y | nonsyn | Cac | Tac | 4946 | 4946 | 1 | 11003-11005 |
Details of the mutation H11Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 4946 | 4946 | All | 0.000946 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 764 | 764 | AY.4 | 0.001189 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 672 | 672 | AY.103 | 0.004172 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 529 | 529 | B.1.1.7 | 0.000474 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 284 | 284 | B.1.617.2 | 0.001069 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 270 | 270 | AY.43 | 0.001196 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 160 | 160 | AY.44 | 0.000974 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 153 | 153 | AY.3 | 0.001522 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 150 | 150 | AY.52 | 0.12215 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 132 | 132 | B.1.617.1 | 0.017023 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 111 | 111 | Q.1 | 0.014022 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 108 | 108 | B.1.2 | 0.000951 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 80 | 80 | AY.25 | 0.000481 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 73 | 73 | AY.26 | 0.002067 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 71 | 71 | AY.20 | 0.002759 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 70 | 70 | AY.39 | 0.00173 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 59 | 59 | B.1.177 | 0.000777 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 59 | 59 | B.1.351 | 0.001754 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 54 | 54 | B.1.1 | 0.00098 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 53 | 53 | B.1 | 0.000485 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 48 | 48 | AY.5 | 0.000991 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 45 | 45 | B.1.427 | 0.002272 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 32 | 32 | AY.102 | 0.000848 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 29 | 29 | AY.54 | 0.002765 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 28 | 28 | AY.4.2 | 0.000607 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 27 | 27 | AY.118 | 0.001692 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 27 | 27 | AY.9.2 | 0.000992 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 27 | 27 | P.1 | 0.000425 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 26 | 26 | AY.14 | 0.002288 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 22 | 22 | B.1.526 | 0.000517 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 20 | 20 | AY.120 | 0.000744 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 18 | 18 | AY.29 | 0.000284 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 18 | 18 | AY.61 | 0.001886 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 17 | 17 | AY.98 | 0.001343 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 17 | 17 | B.1.637 | 0.001242 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 15 | 15 | AY.33 | 0.001002 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 15 | 15 | AY.53 | 0.004313 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 15 | 15 | AY.6 | 0.000617 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 14 | 14 | B.1.429 | 0.000329 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 14 | 14 | C.37 | 0.001625 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 13 | 13 | AY.23 | 0.000907 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 13 | 13 | AY.9.1 | 0.001088 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 13 | 13 | B.1.177.86 | 0.002385 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 12 | 12 | AY.98.1 | 0.000581 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 12 | 12 | B.1.1.519 | 0.000477 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 12 | 12 | B.1.160 | 0.000374 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 11 | 11 | AY.119 | 0.000388 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 11 | 11 | B.1.428 | 0.011224 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 10 | 10 | AY.75 | 0.00056 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 10 | 10 | AY.99.2 | 0.000922 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 9 | 9 | AY.100 | 0.000414 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 9 | 9 | B.1.36 | 0.001313 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 9 | 9 | B.1.621 | 0.000797 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 8 | 8 | AY.114 | 0.001849 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 8 | 8 | AY.117 | 0.000676 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 8 | 8 | AY.27 | 0.000518 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 8 | 8 | B.1.258 | 0.000532 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 8 | 8 | P.1.14 | 0.000382 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 7 | 7 | AY.34 | 0.000679 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 7 | 7 | AY.46.4 | 0.001152 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 7 | 7 | AY.46.6 | 0.000505 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 7 | 7 | B.1.1.136 | 0.148936 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 7 | 7 | B.1.1.214 | 0.000388 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 6 | 6 | AY.107 | 0.002796 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 6 | 6 | AY.110 | 0.000676 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 6 | 6 | AY.42 | 0.000241 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 6 | 6 | AY.45 | 0.00073 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 6 | 6 | AY.75.1 | 0.001082 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 6 | 6 | AY.9 | 0.000406 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 6 | 6 | AY.92 | 0.001724 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 6 | 6 | B.1.177.35 | 0.004147 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 6 | 6 | B.1.177.75 | 0.006243 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 6 | 6 | B.1.221 | 0.000426 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 6 | 6 | B.1.596 | 0.000523 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 5 | 5 | AY.1 | 0.001979 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 5 | 5 | AY.22 | 0.01046 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 5 | 5 | AY.47 | 0.000156 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 5 | 5 | AY.74 | 0.000578 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 5 | 5 | AY.93 | 0.001365 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 5 | 5 | B.1.1.434 | 0.001743 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 5 | 5 | B.1.1.63 | 0.001929 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 5 | 5 | B.1.234 | 0.00066 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 5 | 5 | B.1.258.17 | 0.00052 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 5 | 5 | B.1.523 | 0.012255 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 5 | 5 | B.1.549 | 0.035971 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 4 | 4 | AY.113 | 0.00057 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 4 | 4 | AY.2 | 0.001425 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 4 | 4 | AY.37 | 0.001264 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 4 | 4 | AY.4.5 | 0.00043 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 4 | 4 | AY.46 | 0.000416 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 4 | 4 | AY.91 | 0.002922 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 4 | 4 | B.1.1.210 | 0.022857 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 4 | 4 | B.1.1.28 | 0.001245 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 4 | 4 | B.1.1.348 | 0.003185 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 4 | 4 | B.1.1.416 | 0.00362 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 4 | 4 | B.1.1.70 | 0.001364 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 4 | 4 | B.1.177.7 | 0.000659 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 4 | 4 | B.1.258.5 | 0.035088 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 4 | 4 | B.1.470 | 0.005618 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 4 | 4 | D.2 | 0.0003 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 4 | 4 | N.3 | 0.023256 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 3 | 3 | AY.121 | 0.000406 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 3 | 3 | AY.16 | 0.001139 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 3 | 3 | AY.24 | 0.001293 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 3 | 3 | AY.3.1 | 0.000256 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 3 | 3 | AY.59 | 0.001589 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 3 | 3 | AY.62 | 0.001307 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 3 | 3 | AY.69 | 0.00056 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 3 | 3 | B | 0.000383 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 3 | 3 | B.1.1.198 | 0.004405 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 3 | 3 | B.1.1.216 | 0.002671 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 3 | 3 | B.1.177.12 | 0.000455 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 3 | 3 | B.1.243 | 0.000209 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 3 | 3 | B.1.336 | 0.007317 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 3 | 3 | B.1.36.17 | 0.001482 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 3 | 3 | B.1.499 | 0.003151 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 3 | 3 | B.1.575 | 0.00091 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 3 | 3 | Q.8 | 0.000495 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | A | 0.000774 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | AY.13 | 0.000322 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | AY.16.1 | 0.00094 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | AY.36 | 0.000296 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | AY.38 | 0.000999 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | AY.39.1 | 0.000079 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | AY.73 | 0.001331 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | AY.79 | 0.002421 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | AY.85 | 0.000854 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | B.1.1.176 | 0.000879 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | B.1.1.318 | 0.000604 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | B.1.1.354 | 0.008772 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | B.1.177.45 | 0.000762 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | B.1.177.60 | 0.000437 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | B.1.177.62 | 0.002384 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | B.1.177.81 | 0.000379 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | B.1.36.8 | 0.002 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | B.1.409 | 0.001563 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | B.1.438.1 | 0.000215 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | B.1.466.2 | 0.000782 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | B.1.497 | 0.00063 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | B.1.509 | 0.001732 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | B.1.561 | 0.000794 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | B.1.575.1 | 0.004878 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | B.1.588 | 0.00182 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | B.1.595 | 0.000522 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | B.1.628 | 0.000705 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | B.15 | 0.035088 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | C.1 | 0.004785 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | Q.3 | 0.00029 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 2 | 2 | R.1 | 0.00018 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | A.2.2 | 0.001689 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AA.6 | 0.016129 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AB.1 | 0.008197 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AU.3 | 0.00211 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.116.1 | 0.000311 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.120.2.1 | 0.000498 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.23.1 | 0.000417 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.30 | 0.000396 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.41 | 0.000294 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.5.4 | 0.000277 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.51 | 0.000909 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.58 | 0.000907 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.60 | 0.000938 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.63 | 0.000387 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.70 | 0.000209 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.8 | 0.000606 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.81 | 0.001992 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.86 | 0.00083 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.91.1 | 0.004065 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.96 | 0.002075 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.1.118 | 0.010204 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.1.165 | 0.015385 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.1.207 | 0.001182 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.1.220 | 0.001859 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.1.284 | 0.000107 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.1.289 | 0.002083 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.1.291 | 0.000742 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.1.310 | 0.015152 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.1.326 | 0.001761 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.1.355 | 0.015385 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.1.40 | 0.034483 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.1.50 | 0.000679 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.1.53 | 0.013699 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.110.3 | 0.000718 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.128 | 0.000635 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.139 | 0.000733 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.153 | 0.018868 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.160.24 | 0.004425 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.177.43 | 0.001477 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.189 | 0.004292 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.240 | 0.000216 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.258.4 | 0.003448 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.263 | 0.047619 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.265 | 0.001271 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.320 | 0.001245 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.36.1 | 0.00114 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.36.2 | 0.010753 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.36.21 | 0.00216 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.36.39 | 0.002217 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.362 | 0.001541 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.367 | 0.000792 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.375 | 0.00082 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.396 | 0.000706 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.399 | 0.001934 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.400 | 0.000429 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.406 | 0.006061 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.555 | 0.022222 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.564.1 | 0.001577 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.582 | 0.000491 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.619.1 | 0.000641 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.631 | 0.003367 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.1.633 | 0.041667 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.11 | 0.005128 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.39 | 0.002331 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.4 | 0.002208 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | C.27 | 0.018519 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | C.4 | 0.01 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | L.2 | 0.011364 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | P.1.10 | 0.000269 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | P.6 | 0.003145 |
ORF1ab/nsp6 | 11 | H11Y | Cac | Tac | 1 | 1 | Q.4 | 0.000455 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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