CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : Mut = F200L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp6200F200LF3769LnonsynttCttA2421290.53305811570-11572
ORF1ab/nsp6200F200LF3769LnonsynTtcCtc2421080.44628111570-11572
ORF1ab/nsp6200F200LF3769LnonsynttCttG24250.020661211570-11572

Details of the mutation F200L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp6200F200LttCttA129242All0.000025
ORF1ab/nsp6200F200LTtcCtc108242All0.000021
ORF1ab/nsp6200F200LttCttG5242All0.000001
ORF1ab/nsp6200F200LTtcCtc5555AY.30.000547
ORF1ab/nsp6200F200LttCttA2732AY.40.000042
ORF1ab/nsp6200F200LTtcCtc532AY.40.000008
ORF1ab/nsp6200F200LttCttA2231B.1.1.70.00002
ORF1ab/nsp6200F200LTtcCtc831B.1.1.70.000007
ORF1ab/nsp6200F200LttCttG131B.1.1.70.000001
ORF1ab/nsp6200F200LttCttA2121AY.4.50.002257
ORF1ab/nsp6200F200LTtcCtc1414AY.200.000544
ORF1ab/nsp6200F200LttCttA1313AY.39.10.000515
ORF1ab/nsp6200F200LttCttA99B.1.1770.000119
ORF1ab/nsp6200F200LTtcCtc88AY.460.000833
ORF1ab/nsp6200F200LttCttA57B.1.617.20.000019
ORF1ab/nsp6200F200LTtcCtc27B.1.617.20.000008
ORF1ab/nsp6200F200LttCttG36AY.250.000018
ORF1ab/nsp6200F200LTtcCtc26AY.250.000012
ORF1ab/nsp6200F200LttCttA16AY.250.000006
ORF1ab/nsp6200F200LttCttA23AY.580.001815
ORF1ab/nsp6200F200LTtcCtc13AY.580.000907
ORF1ab/nsp6200F200LttCttA33AY.80.001818
ORF1ab/nsp6200F200LttCttA23B.10.000018
ORF1ab/nsp6200F200LTtcCtc13B.10.000009
ORF1ab/nsp6200F200LttCttA22AY.1200.000074
ORF1ab/nsp6200F200LttCttA12AY.230.00007
ORF1ab/nsp6200F200LTtcCtc12AY.230.00007
ORF1ab/nsp6200F200LttCttA12AY.50.000021
ORF1ab/nsp6200F200LTtcCtc12AY.50.000021
ORF1ab/nsp6200F200LttCttA12AY.610.000105
ORF1ab/nsp6200F200LTtcCtc12AY.610.000105
ORF1ab/nsp6200F200LttCttA22AY.90.000135
ORF1ab/nsp6200F200LttCttA12B.1.10.000018
ORF1ab/nsp6200F200LTtcCtc12B.1.10.000018
ORF1ab/nsp6200F200LttCttA22B.1.4290.000047
ORF1ab/nsp6200F200LttCttG110.055556
ORF1ab/nsp6200F200LTtcCtc11AY.1030.000006
ORF1ab/nsp6200F200LttCttA11AY.1110.000183
ORF1ab/nsp6200F200LTtcCtc11AY.1130.000142
ORF1ab/nsp6200F200LttCttA11AY.130.000161
ORF1ab/nsp6200F200LttCttA11AY.170.008197
ORF1ab/nsp6200F200LttCttA11AY.260.000028
ORF1ab/nsp6200F200LTtcCtc11AY.290.000016
ORF1ab/nsp6200F200LttCttA11AY.330.000067
ORF1ab/nsp6200F200LttCttA11AY.390.000025
ORF1ab/nsp6200F200LTtcCtc11AY.430.000004
ORF1ab/nsp6200F200LttCttA11AY.60.000041
ORF1ab/nsp6200F200LttCttA11AY.870.000833
ORF1ab/nsp6200F200LttCttA11B.1.1.2430.004082
ORF1ab/nsp6200F200LttCttA11B.1.1.2840.000107
ORF1ab/nsp6200F200LTtcCtc11B.1.1.330.000421
ORF1ab/nsp6200F200LTtcCtc11B.1.1.410.006329
ORF1ab/nsp6200F200LTtcCtc11B.1.1.570.011494
ORF1ab/nsp6200F200LttCttA11B.1.20.000009
ORF1ab/nsp6200F200LttCttA11B.1.2210.000071
ORF1ab/nsp6200F200LTtcCtc11B.1.4270.00005
ORF1ab/nsp6200F200LttCttA11B.1.5990.00365
ORF1ab/nsp6200F200LttCttA11B.1.6210.000089