CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : Mut = F200C

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp6200F200CF3769CnonsyntTctGc22210.95454511570-11572
ORF1ab/nsp6200F200CF3769CnonsyntTCtGT2210.045454511570-11572

Details of the mutation F200C within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp6200F200CtTctGc2122All0.000004
ORF1ab/nsp6200F200CtTCtGT122All0
ORF1ab/nsp6200F200CtTctGc99AY.200.00035
ORF1ab/nsp6200F200CtTctGc33B.1.6200.002838
ORF1ab/nsp6200F200CtTctGc120.055556
ORF1ab/nsp6200F200CtTCtGT120.055556
ORF1ab/nsp6200F200CtTctGc22P.1.100.000539
ORF1ab/nsp6200F200CtTctGc11AY.230.00007
ORF1ab/nsp6200F200CtTctGc11AY.30.00001
ORF1ab/nsp6200F200CtTctGc11B.10.000009
ORF1ab/nsp6200F200CtTctGc11B.1.1.70.000001
ORF1ab/nsp6200F200CtTctGc11B.1.3510.00003
ORF1ab/nsp6200F200CtTctGc11B.1.6210.000089