CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : Mut = E39del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp639E39del1E3608del1delgAag-a1170.63636411087-11089
ORF1ab/nsp639E39del1E3608del1delGaa-aa1130.27272711087-11089
ORF1ab/nsp639E39del1E3608del1delgaAga-1110.090909111087-11089

Details of the mutation E39del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp639E39del1gAag-a711All0.000001
ORF1ab/nsp639E39del1Gaa-aa311All0.000001
ORF1ab/nsp639E39del1gaAga-111All0
ORF1ab/nsp639E39del1gAag-a23B.10.000018
ORF1ab/nsp639E39del1Gaa-aa13B.10.000009
ORF1ab/nsp639E39del1gaAga-11AY.40.000002
ORF1ab/nsp639E39del1gAag-a11B.1.10.000018
ORF1ab/nsp639E39del1Gaa-aa11B.1.1.70.000001
ORF1ab/nsp639E39del1gAag-a11B.1.1770.000013
ORF1ab/nsp639E39del1gAag-a11B.1.20.000009
ORF1ab/nsp639E39del1gAag-a11B.1.3360.002439
ORF1ab/nsp639E39del1gAag-a11B.1.5950.000261
ORF1ab/nsp639E39del1Gaa-aa11B.1.617.20.000004