CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : Mut = E39X

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp639E39XE3608XnonsynGaaTaa5050111087-11089

Details of the mutation E39X within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp639E39XGaaTaa5050All0.00001
ORF1ab/nsp639E39XGaaTaa66B.10.000055
ORF1ab/nsp639E39XGaaTaa44B.1.1.1530.004381
ORF1ab/nsp639E39XGaaTaa44B.1.1.70.000004
ORF1ab/nsp639E39XGaaTaa33AY.430.000013
ORF1ab/nsp639E39XGaaTaa33B.1.1770.00004
ORF1ab/nsp639E39XGaaTaa33B.1.2210.000213
ORF1ab/nsp639E39XGaaTaa22B0.000256
ORF1ab/nsp639E39XGaaTaa22B.1.10.000036
ORF1ab/nsp639E39XGaaTaa22B.1.20.000018
ORF1ab/nsp639E39XGaaTaa22B.1.3980.005952
ORF1ab/nsp639E39XGaaTaa22B.1.617.20.000008
ORF1ab/nsp639E39XGaaTaa110.055556
ORF1ab/nsp639E39XGaaTaa11A0.000387
ORF1ab/nsp639E39XGaaTaa11AY.240.000431
ORF1ab/nsp639E39XGaaTaa11AY.260.000028
ORF1ab/nsp639E39XGaaTaa11AY.420.00004
ORF1ab/nsp639E39XGaaTaa11AY.520.000814
ORF1ab/nsp639E39XGaaTaa11AY.9.20.000037
ORF1ab/nsp639E39XGaaTaa11B.1.1.3720.000689
ORF1ab/nsp639E39XGaaTaa11B.1.1180.006711
ORF1ab/nsp639E39XGaaTaa11B.1.1600.000031
ORF1ab/nsp639E39XGaaTaa11B.1.177.730.000566
ORF1ab/nsp639E39XGaaTaa11B.1.258.170.000104
ORF1ab/nsp639E39XGaaTaa11B.1.3010.005917
ORF1ab/nsp639E39XGaaTaa11B.1.5260.000024
ORF1ab/nsp639E39XGaaTaa11B.1.5610.000397
ORF1ab/nsp639E39XGaaTaa11B.1.6230.000536
ORF1ab/nsp639E39XGaaTaa11B.400.000364