CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : Mut = E39D

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp639E39DE3608DnonsyngaAgaC4984760.95582311087-11089
ORF1ab/nsp639E39DE3608DnonsyngaAgaT498220.044176711087-11089

Details of the mutation E39D within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp639E39DgaAgaC476498All0.000091
ORF1ab/nsp639E39DgaAgaT22498All0.000004
ORF1ab/nsp639E39DgaAgaC452452B.1.177.60.441406
ORF1ab/nsp639E39DgaAgaT1724B.1.1770.000224
ORF1ab/nsp639E39DgaAgaC724B.1.1770.000092
ORF1ab/nsp639E39DgaAgaC220.111111
ORF1ab/nsp639E39DgaAgaT22AY.1030.000012
ORF1ab/nsp639E39DgaAgaC22AY.230.000139
ORF1ab/nsp639E39DgaAgaC12AY.40.000002
ORF1ab/nsp639E39DgaAgaT12AY.40.000002
ORF1ab/nsp639E39DgaAgaC22B.10.000018
ORF1ab/nsp639E39DgaAgaC11AP.10.001502
ORF1ab/nsp639E39DgaAgaC11AY.30.00001
ORF1ab/nsp639E39DgaAgaC11AY.50.000021
ORF1ab/nsp639E39DgaAgaC11AY.580.000907
ORF1ab/nsp639E39DgaAgaT11AY.7.10.000113
ORF1ab/nsp639E39DgaAgaC11B.1.1.70.000001
ORF1ab/nsp639E39DgaAgaC11B.1.177.150.000631
ORF1ab/nsp639E39DgaAgaC11B.1.177.310.011494
ORF1ab/nsp639E39DgaAgaC11B.1.177.70.000165
ORF1ab/nsp639E39DgaAgaC11B.1.20.000009
ORF1ab/nsp639E39DgaAgaC11B.1.2580.000067
ORF1ab/nsp639E39DgaAgaT11B.1.617.20.000004