CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : Mut = C197F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp6197C197FC3766FnonsyntGctTc77989779730.99979511561-11563
ORF1ab/nsp6197C197FC3766FnonsyntGCtTT77989160.00020515711561-11563

Details of the mutation C197F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp6197C197FtGctTc7797377989All0.014913
ORF1ab/nsp6197C197FtGCtTT1677989All0.000003
ORF1ab/nsp6197C197FtGctTc7076070771AY.250.425609
ORF1ab/nsp6197C197FtGCtTT1170771AY.250.000066
ORF1ab/nsp6197C197FtGctTc49614961AY.40.007721
ORF1ab/nsp6197C197FtGctTc579579B.1.617.20.00218
ORF1ab/nsp6197C197FtGctTc398398AY.3.10.033933
ORF1ab/nsp6197C197FtGctTc224224AY.1130.031895
ORF1ab/nsp6197C197FtGctTc182182AY.390.004497
ORF1ab/nsp6197C197FtGctTc8686AY.430.000381
ORF1ab/nsp6197C197FtGctTc8282AY.440.000499
ORF1ab/nsp6197C197FtGctTc7878AY.1200.0029
ORF1ab/nsp6197C197FtGctTc4242AY.510.038182
ORF1ab/nsp6197C197FtGctTc3737AY.470.001151
ORF1ab/nsp6197C197FtGctTc3737AY.920.010629
ORF1ab/nsp6197C197FtGctTc2929AY.1030.00018
ORF1ab/nsp6197C197FtGctTc2828AY.1170.002366
ORF1ab/nsp6197C197FtGctTc2727AY.230.001883
ORF1ab/nsp6197C197FtGctTc2525AY.1190.000883
ORF1ab/nsp6197C197FtGctTc2121AY.46.60.001516
ORF1ab/nsp6197C197FtGctTc2020AY.460.002082
ORF1ab/nsp6197C197FtGctTc2020B.1.1.70.000018
ORF1ab/nsp6197C197FtGctTc1919AY.420.000764
ORF1ab/nsp6197C197FtGctTc1919B.10.000174
ORF1ab/nsp6197C197FtGctTc1717AY.980.001343
ORF1ab/nsp6197C197FtGctTc1616AY.410.004703
ORF1ab/nsp6197C197FtGctTc1414AY.990.01469
ORF1ab/nsp6197C197FtGctTc1414B0.001789
ORF1ab/nsp6197C197FtGctTc1313AY.1020.000345
ORF1ab/nsp6197C197FtGctTc1212P.10.000189
ORF1ab/nsp6197C197FtGctTc1111AY.260.000311
ORF1ab/nsp6197C197FtGctTc1111AY.450.001339
ORF1ab/nsp6197C197FtGctTc1010AY.50.000206
ORF1ab/nsp6197C197FtGctTc1010AY.750.00056
ORF1ab/nsp6197C197FtGctTc590.277778
ORF1ab/nsp6197C197FtGCtTT490.222222
ORF1ab/nsp6197C197FtGctTc99AY.30.00009
ORF1ab/nsp6197C197FtGctTc88AY.46.40.001316
ORF1ab/nsp6197C197FtGctTc66AY.1090.004438
ORF1ab/nsp6197C197FtGctTc66AY.820.008141
ORF1ab/nsp6197C197FtGctTc66B.1.20.000053
ORF1ab/nsp6197C197FtGctTc55B.1.2400.001078
ORF1ab/nsp6197C197FtGctTc55B.1.4290.000118
ORF1ab/nsp6197C197FtGctTc44AY.1080.00441
ORF1ab/nsp6197C197FtGctTc44AY.200.000155
ORF1ab/nsp6197C197FtGctTc44AY.330.000267
ORF1ab/nsp6197C197FtGctTc44AY.5.40.001107
ORF1ab/nsp6197C197FtGctTc44AY.670.001857
ORF1ab/nsp6197C197FtGctTc44AY.910.002922
ORF1ab/nsp6197C197FtGctTc44AY.99.20.000369
ORF1ab/nsp6197C197FtGctTc33AY.1010.001471
ORF1ab/nsp6197C197FtGctTc33AY.46.10.00308
ORF1ab/nsp6197C197FtGctTc33AY.46.20.001906
ORF1ab/nsp6197C197FtGctTc33AY.620.001307
ORF1ab/nsp6197C197FtGctTc33AY.930.000819
ORF1ab/nsp6197C197FtGctTc23B.1.2210.000142
ORF1ab/nsp6197C197FtGCtTT13B.1.2210.000071
ORF1ab/nsp6197C197FtGctTc33B.1.3510.000089
ORF1ab/nsp6197C197FtGctTc33B.1.5960.000261
ORF1ab/nsp6197C197FtGctTc22AU.30.004219
ORF1ab/nsp6197C197FtGctTc22AY.1000.000092
ORF1ab/nsp6197C197FtGctTc22AY.1100.000225
ORF1ab/nsp6197C197FtGctTc22AY.1180.000125
ORF1ab/nsp6197C197FtGctTc22AY.140.000176
ORF1ab/nsp6197C197FtGctTc22AY.170.016393
ORF1ab/nsp6197C197FtGctTc22AY.190.002281
ORF1ab/nsp6197C197FtGctTc22AY.270.000129
ORF1ab/nsp6197C197FtGctTc22AY.34.10.00102
ORF1ab/nsp6197C197FtGctTc22AY.5.30.000675
ORF1ab/nsp6197C197FtGctTc22AY.580.001815
ORF1ab/nsp6197C197FtGctTc22AY.610.00021
ORF1ab/nsp6197C197FtGctTc22AY.840.000875
ORF1ab/nsp6197C197FtGctTc22AY.9.20.000073
ORF1ab/nsp6197C197FtGctTc22B.1.1770.000026
ORF1ab/nsp6197C197FtGctTc22B.1.2430.000139
ORF1ab/nsp6197C197FtGctTc22B.1.5230.004902
ORF1ab/nsp6197C197FtGctTc22B.1.5640.000852
ORF1ab/nsp6197C197FtGctTc11A.2.5.20.001572
ORF1ab/nsp6197C197FtGctTc11AY.1060.000335
ORF1ab/nsp6197C197FtGctTc11AY.1140.000231
ORF1ab/nsp6197C197FtGctTc11AY.1160.000287
ORF1ab/nsp6197C197FtGctTc11AY.130.000161
ORF1ab/nsp6197C197FtGctTc11AY.290.000016
ORF1ab/nsp6197C197FtGctTc11AY.320.000532
ORF1ab/nsp6197C197FtGctTc11AY.4.2.10.000149
ORF1ab/nsp6197C197FtGctTc11AY.4.30.000842
ORF1ab/nsp6197C197FtGctTc11AY.4.40.000409
ORF1ab/nsp6197C197FtGctTc11AY.540.000095
ORF1ab/nsp6197C197FtGctTc11AY.590.00053
ORF1ab/nsp6197C197FtGctTc11AY.700.000209
ORF1ab/nsp6197C197FtGctTc11AY.720.001361
ORF1ab/nsp6197C197FtGctTc11AY.730.000665
ORF1ab/nsp6197C197FtGctTc11AY.75.10.00018
ORF1ab/nsp6197C197FtGctTc11AY.770.001127
ORF1ab/nsp6197C197FtGctTc11AY.90.000068
ORF1ab/nsp6197C197FtGctTc11AY.950.000761
ORF1ab/nsp6197C197FtGctTc11AY.98.10.000048
ORF1ab/nsp6197C197FtGctTc11B.1.10.000018
ORF1ab/nsp6197C197FtGctTc11B.1.1.2070.001182
ORF1ab/nsp6197C197FtGctTc11B.1.1.2650.003155
ORF1ab/nsp6197C197FtGctTc11B.1.1.5190.00004
ORF1ab/nsp6197C197FtGctTc11B.1.4590.004082
ORF1ab/nsp6197C197FtGctTc11B.1.4700.001404
ORF1ab/nsp6197C197FtGctTc11B.1.4970.000315
ORF1ab/nsp6197C197FtGctTc11B.1.5250.000113
ORF1ab/nsp6197C197FtGctTc11B.1.5680.001111
ORF1ab/nsp6197C197FtGctTc11B.1.617.10.000129
ORF1ab/nsp6197C197FtGctTc11B.1.6270.00202
ORF1ab/nsp6197C197FtGctTc11B.530.011765
ORF1ab/nsp6197C197FtGctTc11D.20.000075
ORF1ab/nsp6197C197FtGctTc11P.1.70.000319