CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : Mut = A2V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp62A2VA3571VnonsyngCagTa37696376850.99970810976-10978
ORF1ab/nsp62A2VA3571VnonsyngCAgTG3769680.00021222410976-10978
ORF1ab/nsp62A2VA3571VnonsyngCAgTC3769620.00005305610976-10978
ORF1ab/nsp62A2VA3571VnonsyngCAgTT3769610.00002652810976-10978

Details of the mutation A2V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp62A2VgCagTa3768537696All0.007208
ORF1ab/nsp62A2VgCAgTG837696All0.000002
ORF1ab/nsp62A2VgCAgTC237696All0
ORF1ab/nsp62A2VgCAgTT137696All0
ORF1ab/nsp62A2VgCagTa1305213052AY.46.60.942451
ORF1ab/nsp62A2VgCagTa67696770AY.460.704517
ORF1ab/nsp62A2VgCAgTG16770AY.460.000104
ORF1ab/nsp62A2VgCagTa50405040AY.46.51
ORF1ab/nsp62A2VgCagTa41104110AY.46.40.676098
ORF1ab/nsp62A2VgCagTa30393039B.1.617.20.011443
ORF1ab/nsp62A2VgCagTa10651065AY.46.30.994398
ORF1ab/nsp62A2VgCagTa969969AY.46.20.615629
ORF1ab/nsp62A2VgCagTa835835B.1.1.2070.986998
ORF1ab/nsp62A2VgCagTa684684AY.46.10.702259
ORF1ab/nsp62A2VgCagTa482482B.1.177.110.818336
ORF1ab/nsp62A2VgCagTa375375AY.960.778008
ORF1ab/nsp62A2VgCagTa148148B.1.1.70.000132
ORF1ab/nsp62A2VgCagTa128128B.1.20.001127
ORF1ab/nsp62A2VgCagTa110110AY.40.000171
ORF1ab/nsp62A2VgCagTa9191AY.1030.000565
ORF1ab/nsp62A2VgCagTa8687AY.390.002125
ORF1ab/nsp62A2VgCAgTT187AY.390.000025
ORF1ab/nsp62A2VgCagTa6363AY.1170.005325
ORF1ab/nsp62A2VgCagTa4747AY.430.000208
ORF1ab/nsp62A2VgCagTa4545AY.420.00181
ORF1ab/nsp62A2VgCagTa4444B.1.1.4110.647059
ORF1ab/nsp62A2VgCagTa4242B.10.000385
ORF1ab/nsp62A2VgCagTa3939B.1.1.1890.059002
ORF1ab/nsp62A2VgCagTa3838AY.250.000229
ORF1ab/nsp62A2VgCagTa2929AY.4.20.000629
ORF1ab/nsp62A2VgCagTa1721P.10.000268
ORF1ab/nsp62A2VgCAgTG421P.10.000063
ORF1ab/nsp62A2VgCagTa1919AY.440.000116
ORF1ab/nsp62A2VgCagTa1818AY.200.0007
ORF1ab/nsp62A2VgCagTa1818AY.450.00219
ORF1ab/nsp62A2VgCagTa1818B.1.10.000327
ORF1ab/nsp62A2VgCagTa1616AY.920.004596
ORF1ab/nsp62A2VgCagTa1414AY.650.007463
ORF1ab/nsp62A2VgCagTa1212B.1.3510.000357
ORF1ab/nsp62A2VgCagTa1010AY.690.001867
ORF1ab/nsp62A2VgCagTa99B.1.5310.75
ORF1ab/nsp62A2VgCagTa99P.1.140.00043
ORF1ab/nsp62A2VgCagTa99P.1.20.010405
ORF1ab/nsp62A2VgCagTa77AY.260.000198
ORF1ab/nsp62A2VgCagTa66AY.1010.002943
ORF1ab/nsp62A2VgCagTa55AY.4.50.000537
ORF1ab/nsp62A2VgCagTa55B.1.1.5190.000199
ORF1ab/nsp62A2VgCagTa55B.1.1600.000156
ORF1ab/nsp62A2VgCagTa55B.1.1770.000066
ORF1ab/nsp62A2VgCagTa55B.1.4270.000252
ORF1ab/nsp62A2VgCagTa55C.370.00058
ORF1ab/nsp62A2VgCagTa240.111111
ORF1ab/nsp62A2VgCAgTC240.111111
ORF1ab/nsp62A2VgCagTa44AY.320.00213
ORF1ab/nsp62A2VgCagTa44AY.330.000267
ORF1ab/nsp62A2VgCagTa44AY.98.10.000194
ORF1ab/nsp62A2VgCagTa44B.1.1.2530.010025
ORF1ab/nsp62A2VgCagTa24P.1.120.000968
ORF1ab/nsp62A2VgCAgTG24P.1.120.000968
ORF1ab/nsp62A2VgCagTa33AY.1020.00008
ORF1ab/nsp62A2VgCagTa33AY.1130.000427
ORF1ab/nsp62A2VgCagTa33AY.1190.000106
ORF1ab/nsp62A2VgCagTa33AY.230.000209
ORF1ab/nsp62A2VgCagTa33AY.580.002722
ORF1ab/nsp62A2VgCagTa33AY.9.20.00011
ORF1ab/nsp62A2VgCagTa33AY.950.002283
ORF1ab/nsp62A2VgCagTa33B.1.2340.000396
ORF1ab/nsp62A2VgCagTa33B.1.2400.000647
ORF1ab/nsp62A2VgCagTa33B.1.2430.000209
ORF1ab/nsp62A2VgCagTa33B.1.4060.018182
ORF1ab/nsp62A2VgCagTa33B.1.4290.000071
ORF1ab/nsp62A2VgCagTa33B.1.5960.000261
ORF1ab/nsp62A2VgCagTa23P.20.000373
ORF1ab/nsp62A2VgCAgTG13P.20.000187
ORF1ab/nsp62A2VgCagTa22AY.1160.000574
ORF1ab/nsp62A2VgCagTa22AY.1200.000074
ORF1ab/nsp62A2VgCagTa22AY.340.000194
ORF1ab/nsp62A2VgCagTa22AY.39.10.000079
ORF1ab/nsp62A2VgCagTa22AY.750.000112
ORF1ab/nsp62A2VgCagTa22AY.980.000158
ORF1ab/nsp62A2VgCagTa22B0.000256
ORF1ab/nsp62A2VgCagTa22B.1.1.1860.006873
ORF1ab/nsp62A2VgCagTa22B.1.1.2220.000408
ORF1ab/nsp62A2VgCagTa22B.1.1.5180.012658
ORF1ab/nsp62A2VgCagTa22B.1.1.530.027397
ORF1ab/nsp62A2VgCagTa22B.1.258.170.000208
ORF1ab/nsp62A2VgCagTa22B.1.2680.020833
ORF1ab/nsp62A2VgCagTa22B.1.360.000292
ORF1ab/nsp62A2VgCagTa22B.1.4700.002809
ORF1ab/nsp62A2VgCagTa22B.1.6090.000959
ORF1ab/nsp62A2VgCagTa22B.1.617.10.000258
ORF1ab/nsp62A2VgCagTa22Q.80.00033
ORF1ab/nsp62A2VgCagTa11A0.000387
ORF1ab/nsp62A2VgCagTa11A.10.000282
ORF1ab/nsp62A2VgCagTa11AY.1060.000335
ORF1ab/nsp62A2VgCagTa11AY.1180.000063
ORF1ab/nsp62A2VgCagTa11AY.160.00038
ORF1ab/nsp62A2VgCagTa11AY.220.002092
ORF1ab/nsp62A2VgCagTa11AY.470.000031
ORF1ab/nsp62A2VgCagTa11AY.50.000021
ORF1ab/nsp62A2VgCagTa11AY.530.000288
ORF1ab/nsp62A2VgCagTa11AY.620.000436
ORF1ab/nsp62A2VgCagTa11AY.780.001541
ORF1ab/nsp62A2VgCagTa11B.1.1.1410.002012
ORF1ab/nsp62A2VgCagTa11B.1.1.1610.003534
ORF1ab/nsp62A2VgCagTa11B.1.1.2160.00089
ORF1ab/nsp62A2VgCagTa11B.1.1.2940.001266
ORF1ab/nsp62A2VgCagTa11B.1.1.3060.000438
ORF1ab/nsp62A2VgCagTa11B.1.1.3110.000358
ORF1ab/nsp62A2VgCagTa11B.1.1.3260.001761
ORF1ab/nsp62A2VgCagTa11B.1.1.4090.002833
ORF1ab/nsp62A2VgCagTa11B.1.1.4160.000905
ORF1ab/nsp62A2VgCagTa11B.1.1.4340.000349
ORF1ab/nsp62A2VgCagTa11B.1.160.290.004219
ORF1ab/nsp62A2VgCagTa11B.1.1640.014925
ORF1ab/nsp62A2VgCagTa11B.1.177.190.001431
ORF1ab/nsp62A2VgCagTa11B.1.177.350.000691
ORF1ab/nsp62A2VgCagTa11B.1.177.560.000668
ORF1ab/nsp62A2VgCagTa11B.1.2140.003663
ORF1ab/nsp62A2VgCagTa11B.1.214.20.0006
ORF1ab/nsp62A2VgCagTa11B.1.2360.002053
ORF1ab/nsp62A2VgCagTa11B.1.2580.000067
ORF1ab/nsp62A2VgCagTa11B.1.2600.003344
ORF1ab/nsp62A2VgCagTa11B.1.2790.000514
ORF1ab/nsp62A2VgCagTa11B.1.36.270.000763
ORF1ab/nsp62A2VgCagTa11B.1.3670.000792
ORF1ab/nsp62A2VgCagTa11B.1.4970.000315
ORF1ab/nsp62A2VgCagTa11B.1.5330.009615
ORF1ab/nsp62A2VgCagTa11B.1.5760.000907
ORF1ab/nsp62A2VgCagTa11B.1.5770.000687
ORF1ab/nsp62A2VgCagTa11B.1.5950.000261
ORF1ab/nsp62A2VgCagTa11B.1.6210.000089
ORF1ab/nsp62A2VgCagTa11B.1.6230.000536
ORF1ab/nsp62A2VgCagTa11B.1.6360.006711
ORF1ab/nsp62A2VgCagTa11B.1.930.000934
ORF1ab/nsp62A2VgCagTa11C.160.00106
ORF1ab/nsp62A2VgCagTa11D.20.000075
ORF1ab/nsp62A2VgCagTa11N.30.005814