CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : Mut = A2T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp62A2TA3571TnonsynGcaAca129129110976-10978

Details of the mutation A2T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp62A2TGcaAca129129All0.000025
ORF1ab/nsp62A2TGcaAca4646B.1.1.70.000041
ORF1ab/nsp62A2TGcaAca1414AY.40.000022
ORF1ab/nsp62A2TGcaAca1111AY.470.000342
ORF1ab/nsp62A2TGcaAca1010AY.1030.000062
ORF1ab/nsp62A2TGcaAca77B.1.2580.000466
ORF1ab/nsp62A2TGcaAca66AY.1210.000812
ORF1ab/nsp62A2TGcaAca55AY.50.000103
ORF1ab/nsp62A2TGcaAca44B.1.617.20.000015
ORF1ab/nsp62A2TGcaAca22A.210.00554
ORF1ab/nsp62A2TGcaAca22AY.250.000012
ORF1ab/nsp62A2TGcaAca22AY.980.000158
ORF1ab/nsp62A2TGcaAca22B.1.5090.001732
ORF1ab/nsp62A2TGcaAca22Q.80.00033
ORF1ab/nsp62A2TGcaAca11AY.1110.000183
ORF1ab/nsp62A2TGcaAca11AY.1130.000142
ORF1ab/nsp62A2TGcaAca11AY.360.000148
ORF1ab/nsp62A2TGcaAca11AY.4.20.000022
ORF1ab/nsp62A2TGcaAca11AY.750.000056
ORF1ab/nsp62A2TGcaAca11B0.000128
ORF1ab/nsp62A2TGcaAca11B.1.10.000018
ORF1ab/nsp62A2TGcaAca11B.1.1.1710.003676
ORF1ab/nsp62A2TGcaAca11B.1.1.5190.00004
ORF1ab/nsp62A2TGcaAca11B.1.1280.000635
ORF1ab/nsp62A2TGcaAca11B.1.1600.000031
ORF1ab/nsp62A2TGcaAca11B.1.1770.000013
ORF1ab/nsp62A2TGcaAca11B.1.36.170.000494
ORF1ab/nsp62A2TGcaAca11B.1.5950.000261
ORF1ab/nsp62A2TGcaAca11P.10.000016
ORF1ab/nsp62A2TGcaAca11Q.10.000126