CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp6 | 86 | M86I | M3655I | nonsyn | atG | atT | 7054 | 6879 | 0.975191 | 11228-11230 |
ORF1ab/nsp6 | 86 | M86I | M3655I | nonsyn | atG | atA | 7054 | 167 | 0.0236745 | 11228-11230 |
ORF1ab/nsp6 | 86 | M86I | M3655I | nonsyn | atG | atC | 7054 | 8 | 0.00113411 | 11228-11230 |
ORF1ab/nsp6 | 86 | M86V | M3655V | nonsyn | Atg | Gtg | 118 | 116 | 0.983051 | 11228-11230 |
ORF1ab/nsp6 | 86 | M86V | M3655V | nonsyn | AtG | GtA | 118 | 2 | 0.0169492 | 11228-11230 |
ORF1ab/nsp6 | 86 | M86del | M3655del | del | ATG | --- | 25 | 25 | 1 | 11228-11230 |
ORF1ab/nsp6 | 86 | M86L | M3655L | nonsyn | Atg | Ctg | 20 | 15 | 0.75 | 11228-11230 |
ORF1ab/nsp6 | 86 | M86L | M3655L | nonsyn | Atg | Ttg | 20 | 5 | 0.25 | 11228-11230 |
ORF1ab/nsp6 | 86 | M86del1 | M3655del1 | del | atG | at- | 2 | 2 | 1 | 11228-11230 |
ORF1ab/nsp6 | 86 | M86R | M3655R | nonsyn | aTg | aGg | 1 | 1 | 1 | 11228-11230 |
ORF1ab/nsp6 | 86 | M86X | M3655X | nonsyn | ATg | TAg | 1 | 1 | 1 | 11228-11230 |
ORF1ab/nsp6 | 86 | M86del2 | M3655del2 | del | aTG | a-- | 1 | 1 | 1 | 11228-11230 |
ORF1ab/nsp6 | 86 | M86H | M3655H | nonsyn | ATG | CAT | 1 | 1 | 1 | 11228-11230 |
ORF1ab/nsp6 | 86 | M86T | M3655T | nonsyn | aTg | aCg | 1 | 1 | 1 | 11228-11230 |
ORF1ab/nsp6 | 86 | M86D | M3655D | nonsyn | ATG | GAC | 1 | 1 | 1 | 11228-11230 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 6879 | 7054 | All | 0.001316 |
ORF1ab/nsp6 | 86 | M86I | atG | atA | 167 | 7054 | All | 0.000032 |
ORF1ab/nsp6 | 86 | M86I | atG | atC | 8 | 7054 | All | 0.000002 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 2791 | 2791 | B.1.1.311 | 0.999642 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1417 | 1418 | A.23.1 | 0.997887 |
ORF1ab/nsp6 | 86 | M86I | atG | atC | 1 | 1418 | A.23.1 | 0.000704 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 621 | 621 | A | 0.240325 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 356 | 359 | B.1 | 0.003261 |
ORF1ab/nsp6 | 86 | M86I | atG | atA | 3 | 359 | B.1 | 0.000027 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 244 | 248 | AY.4 | 0.00038 |
ORF1ab/nsp6 | 86 | M86I | atG | atA | 4 | 248 | AY.4 | 0.000006 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 246 | 246 | B.1.351 | 0.007313 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 184 | 184 | A.29 | 0.978723 |
ORF1ab/nsp6 | 86 | M86V | Atg | Gtg | 116 | 118 | All | 0.000022 |
ORF1ab/nsp6 | 86 | M86V | AtG | GtA | 2 | 118 | All | 0 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 116 | 116 | B.1.617.2 | 0.000437 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 94 | 94 | A.23 | 0.989474 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 89 | 89 | B.1.1.216 | 0.079252 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 63 | 63 | A.15 | 1 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 57 | 61 | AY.43 | 0.000253 |
ORF1ab/nsp6 | 86 | M86I | atG | atA | 3 | 61 | AY.43 | 0.000013 |
ORF1ab/nsp6 | 86 | M86I | atG | atC | 1 | 61 | AY.43 | 0.000004 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 38 | 60 | B.1.1 | 0.000689 |
ORF1ab/nsp6 | 86 | M86I | atG | atA | 21 | 60 | B.1.1 | 0.000381 |
ORF1ab/nsp6 | 86 | M86I | atG | atC | 1 | 60 | B.1.1 | 0.000018 |
ORF1ab/nsp6 | 86 | M86I | atG | atA | 60 | 60 | B.1.258.24 | 0.645161 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 58 | 58 | B.1.416 | 0.073604 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 54 | 54 | A.25 | 0.981818 |
ORF1ab/nsp6 | 86 | M86I | atG | atA | 48 | 50 | B.1.258 | 0.003194 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 2 | 50 | B.1.258 | 0.000133 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 32 | 33 | AY.25 | 0.000192 |
ORF1ab/nsp6 | 86 | M86I | atG | atC | 1 | 33 | AY.25 | 0.000006 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 29 | 29 | B.1.177.12 | 0.004399 |
ORF1ab/nsp6 | 86 | M86V | Atg | Gtg | 28 | 28 | B.6.6 | 0.024889 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 27 | 27 | AY.4.5 | 0.002902 |
ORF1ab/nsp6 | 86 | M86del | ATG | --- | 25 | 25 | All | 0.000005 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 17 | 25 | B.1.177 | 0.000224 |
ORF1ab/nsp6 | 86 | M86I | atG | atA | 8 | 25 | B.1.177 | 0.000105 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 21 | 21 | B.1.36 | 0.003064 |
ORF1ab/nsp6 | 86 | M86L | Atg | Ctg | 15 | 20 | All | 0.000003 |
ORF1ab/nsp6 | 86 | M86L | Atg | Ttg | 5 | 20 | All | 0.000001 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 18 | 20 | B.1.1.7 | 0.000016 |
ORF1ab/nsp6 | 86 | M86I | atG | atA | 1 | 20 | B.1.1.7 | 0.000001 |
ORF1ab/nsp6 | 86 | M86I | atG | atC | 1 | 20 | B.1.1.7 | 0.000001 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 20 | 20 | B.1.160 | 0.000624 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 19 | 19 | AY.103 | 0.000118 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 14 | 19 | B.1.2 | 0.000123 |
ORF1ab/nsp6 | 86 | M86I | atG | atA | 5 | 19 | B.1.2 | 0.000044 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 18 | 18 | B.1.618 | 0.072581 |
ORF1ab/nsp6 | 86 | M86V | Atg | Gtg | 16 | 16 | B.1.1 | 0.00029 |
ORF1ab/nsp6 | 86 | M86V | Atg | Gtg | 15 | 15 | B.1.177.29 | 1 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 13 | 13 | A.24 | 0.928571 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 13 | 13 | A.26 | 1 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 13 | 13 | AY.39 | 0.000321 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 13 | 13 | B.1.1.39 | 0.006626 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 10 | 12 | B | 0.001278 |
ORF1ab/nsp6 | 86 | M86I | atG | atC | 1 | 12 | B | 0.000128 |
ORF1ab/nsp6 | 86 | M86I | atG | atA | 1 | 12 | B | 0.000128 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 9 | 9 | AM.1 | 1 |
ORF1ab/nsp6 | 86 | M86del | ATG | --- | 7 | 7 | B.1.1.7 | 0.000006 |
ORF1ab/nsp6 | 86 | M86V | Atg | Gtg | 4 | 6 | 0.222222 | |
ORF1ab/nsp6 | 86 | M86V | AtG | GtA | 2 | 6 | 0.111111 | |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 6 | 6 | A.30 | 0.857143 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 5 | 6 | AY.3 | 0.00005 |
ORF1ab/nsp6 | 86 | M86I | atG | atA | 1 | 6 | AY.3 | 0.00001 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 6 | 6 | AY.44 | 0.000037 |
ORF1ab/nsp6 | 86 | M86V | Atg | Gtg | 6 | 6 | B.1 | 0.000055 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 6 | 6 | B.1.1.28 | 0.001867 |
ORF1ab/nsp6 | 86 | M86V | Atg | Gtg | 6 | 6 | B.1.1.306 | 0.00263 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 6 | 6 | B.1.1.351 | 0.01676 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 6 | 6 | B.1.1.54 | 0.018127 |
ORF1ab/nsp6 | 86 | M86V | Atg | Gtg | 6 | 6 | B.1.1.7 | 0.000005 |
ORF1ab/nsp6 | 86 | M86V | Atg | Gtg | 6 | 6 | B.1.177.75 | 0.006243 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 6 | 6 | B.1.471 | 0.016393 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 6 | 6 | B.1.480 | 0.014925 |
ORF1ab/nsp6 | 86 | M86V | Atg | Gtg | 5 | 5 | B.1.177.12 | 0.000758 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 5 | 5 | B.1.427 | 0.000252 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 4 | 4 | B.1.349 | 0.002859 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 4 | 4 | B.1.429 | 0.000094 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 3 | 3 | A.21 | 0.00831 |
ORF1ab/nsp6 | 86 | M86L | Atg | Ctg | 3 | 3 | AY.26 | 0.000085 |
ORF1ab/nsp6 | 86 | M86I | atG | atA | 2 | 3 | AY.26 | 0.000057 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 3 | AY.26 | 0.000028 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 3 | 3 | AY.33 | 0.0002 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 3 | 3 | AY.4.2 | 0.000065 |
ORF1ab/nsp6 | 86 | M86V | Atg | Gtg | 3 | 3 | AY.44 | 0.000018 |
ORF1ab/nsp6 | 86 | M86L | Atg | Ctg | 3 | 3 | AY.46 | 0.000312 |
ORF1ab/nsp6 | 86 | M86L | Atg | Ctg | 3 | 3 | AY.5 | 0.000062 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 3 | 3 | B.1.1.306 | 0.001315 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 3 | 3 | B.1.413 | 0.012766 |
ORF1ab/nsp6 | 86 | M86L | Atg | Ttg | 2 | 2 | 0.111111 | |
ORF1ab/nsp6 | 86 | M86I | atG | atA | 2 | 2 | 0.111111 | |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 2 | 2 | A.27 | 0.003311 |
ORF1ab/nsp6 | 86 | M86del1 | atG | at- | 2 | 2 | All | 0 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 2 | 2 | AY.102 | 0.000053 |
ORF1ab/nsp6 | 86 | M86I | atG | atA | 2 | 2 | AY.20 | 0.000078 |
ORF1ab/nsp6 | 86 | M86V | Atg | Gtg | 2 | 2 | AY.20 | 0.000078 |
ORF1ab/nsp6 | 86 | M86V | Atg | Gtg | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 2 | 2 | AY.46.2 | 0.001271 |
ORF1ab/nsp6 | 86 | M86del | ATG | --- | 2 | 2 | AY.75 | 0.000112 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 2 | 2 | AY.75 | 0.000112 |
ORF1ab/nsp6 | 86 | M86L | Atg | Ctg | 2 | 2 | AY.75.1 | 0.000361 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 2 | 2 | AY.95 | 0.001522 |
ORF1ab/nsp6 | 86 | M86V | Atg | Gtg | 2 | 2 | B.1.1.174 | 0.006757 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 2 | 2 | B.1.1.217 | 0.007273 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 2 | 2 | B.1.1.261 | 0.017241 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 2 | 2 | B.1.1.37 | 0.000386 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 2 | 2 | B.1.1.519 | 0.000079 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 2 | 2 | B.1.157 | 0.00597 |
ORF1ab/nsp6 | 86 | M86V | Atg | Gtg | 2 | 2 | B.1.177 | 0.000026 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 2 | 2 | B.1.177.15 | 0.001262 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 2 | 2 | B.1.177.21 | 0.000153 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 2 | 2 | B.1.210 | 0.004264 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 2 | 2 | B.1.221 | 0.000142 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 2 | 2 | B.1.236 | 0.004107 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 2 | 2 | B.1.243 | 0.000139 |
ORF1ab/nsp6 | 86 | M86V | Atg | Gtg | 2 | 2 | B.1.36 | 0.000292 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 2 | 2 | B.1.415 | 0.028571 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 2 | 2 | B.1.526 | 0.000047 |
ORF1ab/nsp6 | 86 | M86I | atG | atC | 1 | 2 | B.1.617.1 | 0.000129 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 2 | B.1.617.1 | 0.000129 |
ORF1ab/nsp6 | 86 | M86del | ATG | --- | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 2 | 2 | N.5 | 0.003534 |
ORF1ab/nsp6 | 86 | M86del | ATG | --- | 1 | 1 | A | 0.000387 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | A.12 | 0.166667 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | A.19 | 0.009434 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | A.2.5.2 | 0.001572 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | A.6 | 0.005128 |
ORF1ab/nsp6 | 86 | M86R | aTg | aGg | 1 | 1 | All | 0 |
ORF1ab/nsp6 | 86 | M86X | ATg | TAg | 1 | 1 | All | 0 |
ORF1ab/nsp6 | 86 | M86T | aTg | aCg | 1 | 1 | All | 0 |
ORF1ab/nsp6 | 86 | M86del2 | aTG | a-- | 1 | 1 | All | 0 |
ORF1ab/nsp6 | 86 | M86H | ATG | CAT | 1 | 1 | All | 0 |
ORF1ab/nsp6 | 86 | M86D | ATG | GAC | 1 | 1 | All | 0 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | AU.2 | 0.002421 |
ORF1ab/nsp6 | 86 | M86V | Atg | Gtg | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp6 | 86 | M86L | Atg | Ttg | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp6 | 86 | M86V | Atg | Gtg | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp6 | 86 | M86del | ATG | --- | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp6 | 86 | M86del | ATG | --- | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp6 | 86 | M86L | Atg | Ttg | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | AY.3.1 | 0.000085 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp6 | 86 | M86del | ATG | --- | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp6 | 86 | M86del2 | aTG | a-- | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp6 | 86 | M86R | aTg | aGg | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp6 | 86 | M86del | ATG | --- | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp6 | 86 | M86L | Atg | Ctg | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp6 | 86 | M86del | ATG | --- | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | AY.46.5 | 0.000198 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | AY.64 | 0.000595 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | AY.77 | 0.001127 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp6 | 86 | M86V | Atg | Gtg | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | AY.96 | 0.002075 |
ORF1ab/nsp6 | 86 | M86H | ATG | CAT | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp6 | 86 | M86del | ATG | --- | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp6 | 86 | M86L | Atg | Ctg | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | B.1.1.10 | 0.001115 |
ORF1ab/nsp6 | 86 | M86V | Atg | Gtg | 1 | 1 | B.1.1.203 | 0.016949 |
ORF1ab/nsp6 | 86 | M86X | ATg | TAg | 1 | 1 | B.1.1.221 | 0.010101 |
ORF1ab/nsp6 | 86 | M86I | atG | atA | 1 | 1 | B.1.1.251 | 0.007937 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | B.1.1.29 | 0.010309 |
ORF1ab/nsp6 | 86 | M86V | Atg | Gtg | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp6 | 86 | M86I | atG | atC | 1 | 1 | B.1.1.376 | 0.005952 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | B.1.1.432 | 0.001266 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | B.1.1.63 | 0.000386 |
ORF1ab/nsp6 | 86 | M86del1 | atG | at- | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp6 | 86 | M86I | atG | atA | 1 | 1 | B.1.1.95 | 0.019608 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | B.1.126 | 0.001276 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | B.1.128 | 0.000635 |
ORF1ab/nsp6 | 86 | M86V | Atg | Gtg | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | B.1.160.17 | 0.001701 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | B.1.160.30 | 0.002976 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | B.1.167 | 0.007812 |
ORF1ab/nsp6 | 86 | M86L | Atg | Ttg | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp6 | 86 | M86V | Atg | Gtg | 1 | 1 | B.1.177.32 | 0.00135 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | B.1.177.56 | 0.000668 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp6 | 86 | M86del | ATG | --- | 1 | 1 | B.1.177.76 | 0.002494 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | B.1.177.77 | 0.000726 |
ORF1ab/nsp6 | 86 | M86D | ATG | GAC | 1 | 1 | B.1.177.83 | 0.001481 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp6 | 86 | M86V | Atg | Gtg | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | B.1.36.38 | 0.001642 |
ORF1ab/nsp6 | 86 | M86I | atG | atA | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | B.1.37 | 0.014706 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | B.1.403 | 0.003268 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | B.1.441 | 0.009615 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | B.1.448 | 0.002625 |
ORF1ab/nsp6 | 86 | M86I | atG | atA | 1 | 1 | B.1.466 | 0.023256 |
ORF1ab/nsp6 | 86 | M86V | Atg | Gtg | 1 | 1 | B.1.470 | 0.001404 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp6 | 86 | M86I | atG | atA | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp6 | 86 | M86L | Atg | Ctg | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp6 | 86 | M86T | aTg | aCg | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | B.1.617.3 | 0.002985 |
ORF1ab/nsp6 | 86 | M86V | Atg | Gtg | 1 | 1 | B.1.619.1 | 0.000641 |
ORF1ab/nsp6 | 86 | M86L | Atg | Ctg | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp6 | 86 | M86del | ATG | --- | 1 | 1 | B.1.630 | 0.005236 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | B.1.633 | 0.041667 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | B.1.9.5 | 0.005682 |
ORF1ab/nsp6 | 86 | M86del | ATG | --- | 1 | 1 | B.34 | 0.013699 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | B.4.7 | 0.010101 |
ORF1ab/nsp6 | 86 | M86I | atG | atA | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp6 | 86 | M86del | ATG | --- | 1 | 1 | C.17 | 0.055556 |
ORF1ab/nsp6 | 86 | M86del | ATG | --- | 1 | 1 | N.4 | 0.004255 |
ORF1ab/nsp6 | 86 | M86del | ATG | --- | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp6 | 86 | M86del | ATG | --- | 1 | 1 | Q.8 | 0.000165 |
ORF1ab/nsp6 | 86 | M86I | atG | atT | 1 | 1 | R.1 | 0.00009 |
ORF1ab/nsp6 | 86 | M86V | Atg | Gtg | 1 | 1 | R.1 | 0.00009 |
ORF1ab/nsp6 | 86 | M86del1 | atG | at- | 1 | 1 | R.1 | 0.00009 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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