CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp6 | 84 | V84F | V3653F | nonsyn | Gtc | Ttc | 4773 | 4766 | 0.998533 | 11222-11224 |
ORF1ab/nsp6 | 84 | V84F | V3653F | nonsyn | GtC | TtT | 4773 | 7 | 0.00146658 | 11222-11224 |
ORF1ab/nsp6 | 84 | V84V | V3653V | syn | gtC | gtT | 4541 | 4421 | 0.973574 | 11222-11224 |
ORF1ab/nsp6 | 84 | V84V | V3653V | syn | gtC | gtA | 4541 | 111 | 0.024444 | 11222-11224 |
ORF1ab/nsp6 | 84 | V84V | V3653V | syn | gtC | gtG | 4541 | 9 | 0.00198194 | 11222-11224 |
ORF1ab/nsp6 | 84 | V84I | V3653I | nonsyn | Gtc | Atc | 345 | 345 | 1 | 11222-11224 |
ORF1ab/nsp6 | 84 | V84A | V3653A | nonsyn | gTc | gCc | 91 | 91 | 1 | 11222-11224 |
ORF1ab/nsp6 | 84 | V84del | V3653del | del | GTC | --- | 22 | 22 | 1 | 11222-11224 |
ORF1ab/nsp6 | 84 | V84L | V3653L | nonsyn | Gtc | Ctc | 8 | 8 | 1 | 11222-11224 |
ORF1ab/nsp6 | 84 | V84D | V3653D | nonsyn | gTc | gAc | 2 | 2 | 1 | 11222-11224 |
ORF1ab/nsp6 | 84 | V84del1 | V3653del1 | del | GTC | -AA | 1 | 1 | 1 | 11222-11224 |
ORF1ab/nsp6 | 84 | V84N | V3653N | nonsyn | GTc | AAc | 1 | 1 | 1 | 11222-11224 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 4766 | 4773 | All | 0.000912 |
ORF1ab/nsp6 | 84 | V84F | GtC | TtT | 7 | 4773 | All | 0.000001 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 4421 | 4541 | All | 0.000846 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtA | 111 | 4541 | All | 0.000021 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtG | 9 | 4541 | All | 0.000002 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1486 | 1486 | B.1 | 0.013611 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 865 | 865 | B.1.36.1 | 0.986317 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 623 | 629 | B.1.1.523 | 0.973437 |
ORF1ab/nsp6 | 84 | V84F | GtC | TtT | 6 | 629 | B.1.1.523 | 0.009375 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 570 | 570 | B.1.36.31 | 0.998249 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 475 | 476 | B.1.617.2 | 0.001789 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtA | 1 | 476 | B.1.617.2 | 0.000004 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 416 | 416 | B.1.1.374 | 0.988124 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 381 | 381 | B.1.427 | 0.01924 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 345 | 345 | All | 0.000066 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 326 | 326 | B.1.398 | 0.970238 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 292 | 294 | B.1.1.7 | 0.000261 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtA | 2 | 294 | B.1.1.7 | 0.000002 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 289 | 289 | AY.25 | 0.001738 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 256 | 264 | AY.43 | 0.001134 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtA | 8 | 264 | AY.43 | 0.000035 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 252 | 258 | B.1 | 0.002308 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtA | 6 | 258 | B.1 | 0.000055 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 177 | 177 | B.1.1 | 0.003211 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 169 | 169 | B.1.626 | 0.965714 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 133 | 165 | AY.4 | 0.000207 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtA | 32 | 165 | AY.4 | 0.00005 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 145 | 145 | B.1.36 | 0.021156 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 132 | 132 | B.1.632 | 0.885906 |
ORF1ab/nsp6 | 84 | V84A | gTc | gCc | 91 | 91 | All | 0.000017 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 88 | 88 | B.1.1.222 | 0.017952 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 80 | 80 | B.1.160 | 0.002495 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 79 | 79 | B.1.1.306 | 0.034634 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 78 | 78 | B.1.214.2 | 0.046763 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 76 | 76 | B.1.1.163 | 0.580153 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 75 | 75 | AY.103 | 0.000466 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 69 | 69 | B.1.351 | 0.002051 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 65 | 65 | B.1.2 | 0.000572 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 65 | 65 | B.1.617.2 | 0.000245 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 59 | 59 | B.1.236 | 0.12115 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 55 | 55 | AY.102 | 0.001458 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 54 | 54 | B.1.177.63 | 0.145946 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 53 | 53 | AY.119 | 0.001871 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 51 | 51 | B.1.1.311 | 0.018266 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 47 | 47 | AY.25 | 0.000283 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 45 | 45 | AY.44 | 0.000274 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 43 | 43 | AY.93 | 0.011742 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 41 | 41 | AY.3 | 0.000408 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 40 | 40 | AY.43 | 0.000177 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 39 | 39 | B.1.2 | 0.000343 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 38 | 38 | AY.4.2 | 0.000824 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 37 | 37 | B.1.1.7 | 0.000033 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 35 | 35 | B.1.2 | 0.000308 |
ORF1ab/nsp6 | 84 | V84A | gTc | gCc | 32 | 32 | B.1.1.7 | 0.000029 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 32 | 32 | B.1.177 | 0.000421 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 32 | 32 | B.1.617.2 | 0.00012 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 31 | 31 | B.1.36.16 | 0.04416 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 31 | 31 | B.1.540 | 0.300971 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 31 | 31 | P.1 | 0.000488 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 30 | 30 | AY.36 | 0.004446 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 29 | 30 | B.1.1 | 0.000526 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtA | 1 | 30 | B.1.1 | 0.000018 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 27 | 27 | AY.42 | 0.001086 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 25 | 25 | AY.39 | 0.000618 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtA | 23 | 23 | AY.4.5 | 0.002472 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 23 | 23 | B.1.177 | 0.000303 |
ORF1ab/nsp6 | 84 | V84del | GTC | --- | 22 | 22 | All | 0.000004 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 18 | 18 | AY.75 | 0.001008 |
ORF1ab/nsp6 | 84 | V84A | gTc | gCc | 17 | 17 | AY.4 | 0.000026 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 17 | 17 | B.1.609 | 0.00815 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 16 | 16 | AY.43 | 0.000071 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 16 | 16 | B.1.36.29 | 0.008277 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 15 | 15 | B.1.1.500 | 0.3 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 15 | 15 | B.1.429 | 0.000353 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 15 | 15 | B.1.554 | 0.066079 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtA | 12 | 14 | AY.120 | 0.000446 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 14 | AY.120 | 0.000074 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 14 | 14 | AY.29 | 0.000221 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 14 | 14 | B.1.258 | 0.000932 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 13 | 13 | AY.23 | 0.000907 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 13 | 13 | B.1.1.519 | 0.000516 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 13 | 13 | B.1.36.8 | 0.013 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 12 | 12 | B | 0.001534 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 12 | 12 | B.1.1.28 | 0.003735 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 12 | 12 | B.1.240 | 0.002587 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 11 | 11 | AY.111 | 0.002015 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 11 | 11 | AY.116 | 0.003155 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 11 | 11 | B.1.160 | 0.000343 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 11 | 11 | B.1.621 | 0.000974 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtG | 9 | 10 | AY.47 | 0.00028 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 10 | AY.47 | 0.000031 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 10 | 10 | B.1 | 0.000092 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 10 | 10 | B.1.631 | 0.03367 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 9 | 9 | B.1.1.12 | 0.067164 |
ORF1ab/nsp6 | 84 | V84L | Gtc | Ctc | 8 | 8 | All | 0.000002 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 8 | 8 | AY.26 | 0.000226 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 8 | 8 | AY.33 | 0.000534 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 8 | 8 | AY.44 | 0.000049 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 8 | 8 | AY.46 | 0.000833 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 8 | 8 | B.1.199 | 0.033058 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 7 | 7 | AY.105 | 0.004502 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 7 | 7 | AY.42 | 0.000282 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 7 | 7 | AY.9.1 | 0.000586 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 7 | 7 | AY.92 | 0.002011 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 7 | 7 | B.1.1.241 | 0.014493 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 7 | 7 | B.1.1.47 | 0.037433 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 7 | 7 | B.1.177 | 0.000092 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 7 | 7 | B.1.351.2 | 0.002118 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 7 | 7 | B.1.36.17 | 0.003458 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 7 | 7 | B.1.620 | 0.006623 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 5 | 6 | AY.20 | 0.000194 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtA | 1 | 6 | AY.20 | 0.000039 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 6 | 6 | AY.4 | 0.000009 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 6 | 6 | AY.6 | 0.000247 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 6 | 6 | AY.91 | 0.004383 |
ORF1ab/nsp6 | 84 | V84A | gTc | gCc | 6 | 6 | AY.95 | 0.004566 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 6 | 6 | B.1.1.174 | 0.02027 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 6 | 6 | B.1.1.192 | 0.013857 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 6 | 6 | B.1.1.222 | 0.001224 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 6 | 6 | B.1.1.25 | 0.003411 |
ORF1ab/nsp6 | 84 | V84del | GTC | --- | 6 | 6 | B.1.1.7 | 0.000005 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 6 | 6 | B.1.131 | 0.052632 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 6 | 6 | B.1.177.57 | 0.001686 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 6 | 6 | B.1.23 | 0.036364 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 6 | 6 | B.1.311 | 0.001647 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 6 | 6 | B.1.408 | 0.02214 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 6 | 6 | B.1.429 | 0.000141 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 6 | 6 | B.1.526 | 0.000141 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 6 | 6 | B.1.538 | 0.048387 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 6 | 6 | B.4.1 | 0.113208 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtA | 5 | 5 | A | 0.001935 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 5 | 5 | AY.121 | 0.000677 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 5 | 5 | AY.4 | 0.000008 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 3 | 5 | AY.58 | 0.002722 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtA | 2 | 5 | AY.58 | 0.001815 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtA | 5 | 5 | AY.9 | 0.000338 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 5 | 5 | B.1.1.189 | 0.007564 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 5 | 5 | B.1.1.388 | 0.227273 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 5 | 5 | B.1.1.462 | 0.043103 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 5 | 5 | B.1.243 | 0.000348 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 5 | 5 | B.1.258 | 0.000333 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 4 | 5 | B.1.596 | 0.000349 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtA | 1 | 5 | B.1.596 | 0.000087 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 5 | 5 | B.1.637 | 0.000365 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 5 | 5 | C.37 | 0.00058 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 4 | 4 | AY.1 | 0.001583 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 4 | 4 | AY.102 | 0.000106 |
ORF1ab/nsp6 | 84 | V84A | gTc | gCc | 4 | 4 | AY.25 | 0.000024 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 4 | 4 | AY.45 | 0.000487 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 4 | 4 | AY.5 | 0.000083 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtA | 4 | 4 | AY.8 | 0.002424 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 4 | 4 | AY.90 | 0.002738 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 4 | 4 | AY.98.1 | 0.000194 |
ORF1ab/nsp6 | 84 | V84L | Gtc | Ctc | 4 | 4 | B.1.1 | 0.000073 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 4 | 4 | B.1.1.161 | 0.014134 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 4 | 4 | B.1.1.263 | 0.006231 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 4 | 4 | B.1.1.7 | 0.000004 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 4 | 4 | B.1.243 | 0.000278 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 4 | 4 | B.1.400 | 0.001716 |
ORF1ab/nsp6 | 84 | V84A | gTc | gCc | 4 | 4 | B.1.471 | 0.010929 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 4 | 4 | P.1.14 | 0.000191 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 3 | 3 | AY.100 | 0.000138 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 3 | 3 | AY.109 | 0.002219 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 3 | 3 | AY.117 | 0.000254 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 3 | 3 | AY.30 | 0.001187 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 3 | AY.39.1 | 0.000079 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtA | 1 | 3 | AY.39.1 | 0.00004 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 3 | 3 | AY.4.2.1 | 0.000447 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 3 | 3 | AY.46 | 0.000312 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 3 | 3 | AY.48 | 0.001395 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 3 | 3 | AY.82 | 0.004071 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 3 | AY.87 | 0.001665 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtA | 1 | 3 | AY.87 | 0.000833 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 3 | 3 | AY.98 | 0.000237 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 3 | 3 | B.1.1.134 | 0.034091 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 3 | 3 | B.1.1.216 | 0.002671 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 3 | 3 | B.1.1.306 | 0.001315 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 3 | 3 | B.1.1.432 | 0.003797 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 3 | 3 | B.1.1.506 | 0.111111 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 3 | 3 | B.1.12 | 0.024 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 3 | 3 | B.1.221 | 0.000213 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 3 | 3 | B.1.258.17 | 0.000312 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 3 | 3 | B.1.36.22 | 0.003623 |
ORF1ab/nsp6 | 84 | V84A | gTc | gCc | 3 | 3 | B.1.369 | 0.000856 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 3 | 3 | B.1.439 | 0.017751 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 3 | 3 | B.1.509 | 0.002597 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 3 | 3 | B.1.551 | 0.003871 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 3 | 3 | B.1.596 | 0.000261 |
ORF1ab/nsp6 | 84 | V84A | gTc | gCc | 3 | 3 | B.1.617.2 | 0.000011 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | A.2.5.1 | 0.009615 |
ORF1ab/nsp6 | 84 | V84D | gTc | gAc | 2 | 2 | All | 0 |
ORF1ab/nsp6 | 84 | V84L | Gtc | Ctc | 2 | 2 | AY.103 | 0.000012 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 2 | 2 | AY.103 | 0.000012 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | AY.106 | 0.00067 |
ORF1ab/nsp6 | 84 | V84A | gTc | gCc | 2 | 2 | AY.121 | 0.000271 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | AY.32 | 0.001065 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 2 | 2 | AY.39 | 0.000049 |
ORF1ab/nsp6 | 84 | V84del | GTC | --- | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | AY.4.4 | 0.000818 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | AY.41 | 0.000588 |
ORF1ab/nsp6 | 84 | V84del | GTC | --- | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 2 | 2 | AY.44 | 0.000012 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | AY.49 | 0.00639 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 2 | 2 | AY.5 | 0.000041 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | AY.84 | 0.000875 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | AY.98.1 | 0.000097 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 2 | 2 | AY.98.1 | 0.000097 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | AY.99 | 0.002099 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | AY.99.2 | 0.000184 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | B.1.1.192 | 0.004619 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 2 | 2 | B.1.1.198 | 0.002937 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 2 | 2 | B.1.1.28 | 0.000622 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | B.1.1.291 | 0.001485 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 2 | 2 | B.1.1.291 | 0.001485 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | B.1.1.328 | 0.033898 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 2 | 2 | B.1.1.335 | 0.025974 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | B.1.1.348 | 0.001592 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | B.1.1.37 | 0.000386 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | B.1.1.39 | 0.001019 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 2 | 2 | B.1.1.409 | 0.005666 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | B.1.1.434 | 0.000697 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 2 | 2 | B.1.1.54 | 0.006042 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 2 | 2 | B.1.117 | 0.025 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 2 | 2 | B.1.160 | 0.000062 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | B.1.177.2 | 0.009091 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | B.1.177.31 | 0.022989 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | B.1.199 | 0.008264 |
ORF1ab/nsp6 | 84 | V84A | gTc | gCc | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 2 | 2 | B.1.221 | 0.000142 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | B.1.234 | 0.000264 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | B.1.240 | 0.000431 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | B.1.36 | 0.000292 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 2 | 2 | B.1.36.10 | 0.009569 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 2 | 2 | B.1.381 | 0.015625 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 2 | 2 | B.1.396 | 0.001411 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 2 | 2 | B.1.427 | 0.000101 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | B.1.511 | 0.068966 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 2 | 2 | B.1.526 | 0.000047 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 2 | 2 | B.1.527 | 0.007407 |
ORF1ab/nsp6 | 84 | V84A | gTc | gCc | 2 | 2 | B.1.565 | 0.001621 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | B.1.575 | 0.000607 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | B.1.577 | 0.001375 |
ORF1ab/nsp6 | 84 | V84del | GTC | --- | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 2 | 2 | B.1.623 | 0.001073 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 2 | 2 | B.40 | 0.000729 |
ORF1ab/nsp6 | 84 | V84A | gTc | gCc | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | P.1.17 | 0.000324 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | P.5 | 0.027397 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 2 | 2 | Q.3 | 0.00029 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | A.19 | 0.009434 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | A.2.2 | 0.001689 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | A.28 | 0.002646 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | A.30 | 0.142857 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | AE.4 | 0.043478 |
ORF1ab/nsp6 | 84 | V84A | gTc | gCc | 1 | 1 | AE.8 | 0.000489 |
ORF1ab/nsp6 | 84 | V84N | GTc | AAc | 1 | 1 | All | 0 |
ORF1ab/nsp6 | 84 | V84del1 | GTC | -AA | 1 | 1 | All | 0 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp6 | 84 | V84A | gTc | gCc | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtA | 1 | 1 | AY.11 | 0.001339 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | AY.117 | 0.000085 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtA | 1 | 1 | AY.120.2 | 0.001285 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtA | 1 | 1 | AY.17 | 0.008197 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp6 | 84 | V84A | gTc | gCc | 1 | 1 | AY.23.1 | 0.000417 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp6 | 84 | V84del | GTC | --- | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | AY.3.1 | 0.000085 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | AY.39.1.1 | 0.000725 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | AY.4.1 | 0.000737 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp6 | 84 | V84del | GTC | --- | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp6 | 84 | V84A | gTc | gCc | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | AY.46.1 | 0.001027 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | AY.46.1 | 0.001027 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 1 | 1 | AY.5.4 | 0.000277 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | AY.63 | 0.000387 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | AY.70 | 0.000209 |
ORF1ab/nsp6 | 84 | V84del1 | GTC | -AA | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp6 | 84 | V84A | gTc | gCc | 1 | 1 | AY.72 | 0.001361 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | AY.74 | 0.000116 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp6 | 84 | V84del | GTC | --- | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | AY.78 | 0.001541 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | AY.79 | 0.001211 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtA | 1 | 1 | B | 0.000128 |
ORF1ab/nsp6 | 84 | V84del | GTC | --- | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp6 | 84 | V84A | gTc | gCc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp6 | 84 | V84N | GTc | AAc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp6 | 84 | V84A | gTc | gCc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.1.135 | 0.004695 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.1.138 | 0.006061 |
ORF1ab/nsp6 | 84 | V84A | gTc | gCc | 1 | 1 | B.1.1.176 | 0.000439 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.1.176 | 0.000439 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.1.176 | 0.000439 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.1.189 | 0.001513 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.1.194 | 0.00495 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.1.196 | 0.005714 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.1.200 | 0.007463 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.1.210 | 0.005714 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 1 | 1 | B.1.1.214 | 0.000055 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.1.214 | 0.000055 |
ORF1ab/nsp6 | 84 | V84del | GTC | --- | 1 | 1 | B.1.1.214 | 0.000055 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.1.217 | 0.003636 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.1.282 | 0.011628 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.1.284 | 0.000107 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.1.294 | 0.001266 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.1.303 | 0.002762 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.1.335 | 0.012987 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.1.34 | 0.013158 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.1.363 | 0.005988 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.1.397 | 0.002252 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.1.398 | 0.003226 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.1.420 | 0.001006 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.1.437 | 0.010417 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.1.44 | 0.00241 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.1.448 | 0.002033 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.1.464 | 0.001473 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.1.486 | 0.001577 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.1.51 | 0.001718 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.1.526 | 0.003546 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.1.56 | 0.017857 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.1.63 | 0.000386 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.1.63 | 0.000386 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 1 | 1 | B.1.1.63 | 0.000386 |
ORF1ab/nsp6 | 84 | V84L | Gtc | Ctc | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.1.99 | 0.02381 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.110 | 0.004525 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.113 | 0.015625 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.128 | 0.000635 |
ORF1ab/nsp6 | 84 | V84L | Gtc | Ctc | 1 | 1 | B.1.160.7 | 0.002079 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.177.10 | 0.000878 |
ORF1ab/nsp6 | 84 | V84A | gTc | gCc | 1 | 1 | B.1.177.15 | 0.000631 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.177.35 | 0.000691 |
ORF1ab/nsp6 | 84 | V84del | GTC | --- | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.177.5 | 0.001242 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.177.62 | 0.001192 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.177.65 | 0.000665 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.177.75 | 0.001041 |
ORF1ab/nsp6 | 84 | V84del | GTC | --- | 1 | 1 | B.1.177.76 | 0.002494 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp6 | 84 | V84D | gTc | gAc | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.210 | 0.002132 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.214 | 0.003663 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.224 | 0.025 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.229 | 0.009709 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.232 | 0.000537 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 1 | 1 | B.1.239 | 0.001221 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.239 | 0.001221 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.247 | 0.014925 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.258.17 | 0.000104 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.329 | 0.000608 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.336 | 0.002439 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.350 | 0.002933 |
ORF1ab/nsp6 | 84 | V84D | gTc | gAc | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.366 | 0.004878 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.387 | 0.04 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.389 | 0.001002 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.397 | 0.004854 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.400 | 0.000429 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.404 | 0.001302 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.409 | 0.000781 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.426 | 0.001009 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 1 | 1 | B.1.428 | 0.00102 |
ORF1ab/nsp6 | 84 | V84A | gTc | gCc | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 1 | 1 | B.1.436 | 0.001029 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.438 | 0.006536 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.438.1 | 0.000107 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.456 | 0.003268 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.471 | 0.002732 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.485 | 0.014925 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.505 | 0.004386 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.520 | 0.021739 |
ORF1ab/nsp6 | 84 | V84A | gTc | gCc | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.533 | 0.009615 |
ORF1ab/nsp6 | 84 | V84A | gTc | gCc | 1 | 1 | B.1.560 | 0.00463 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.566 | 0.019231 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.567 | 0.003333 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.582 | 0.000491 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.590 | 0.004545 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtA | 1 | 1 | B.1.599 | 0.00365 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtA | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | B.1.78 | 0.008547 |
ORF1ab/nsp6 | 84 | V84A | gTc | gCc | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp6 | 84 | V84A | gTc | gCc | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp6 | 84 | V84del | GTC | --- | 1 | 1 | N.4 | 0.004255 |
ORF1ab/nsp6 | 84 | V84F | GtC | TtT | 1 | 1 | N.8 | 0.03125 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | N.9 | 0.005952 |
ORF1ab/nsp6 | 84 | V84del | GTC | --- | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | P.3 | 0.001595 |
ORF1ab/nsp6 | 84 | V84del | GTC | --- | 1 | 1 | Q.8 | 0.000165 |
ORF1ab/nsp6 | 84 | V84I | Gtc | Atc | 1 | 1 | Q.8 | 0.000165 |
ORF1ab/nsp6 | 84 | V84F | Gtc | Ttc | 1 | 1 | R.1 | 0.00009 |
ORF1ab/nsp6 | 84 | V84V | gtC | gtT | 1 | 1 | W.4 | 0.001351 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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