CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : CodonNum = 60 & Codon = gtT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp660V60VV3629VsyngtCgtT489548080.98222711150-11152

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp660V60VgtCgtT48084895All0.00092
ORF1ab/nsp660V60VgtCgtT741741B.1.177.321
ORF1ab/nsp660V60VgtCgtT555567B.1.1.70.000497
ORF1ab/nsp660V60VgtCgtT406406AY.1160.116432
ORF1ab/nsp660V60VgtCgtT322324B.1.20.002835
ORF1ab/nsp660V60VgtCgtT301302AY.250.00181
ORF1ab/nsp660V60VgtCgtT265266AY.200.010299
ORF1ab/nsp660V60VgtCgtT201208B.1.617.20.000757
ORF1ab/nsp660V60VgtCgtT143143B.1.177.261
ORF1ab/nsp660V60VgtCgtT127133B.10.001163
ORF1ab/nsp660V60VgtCgtT113120AY.40.000176
ORF1ab/nsp660V60VgtCgtT108113AY.430.000478
ORF1ab/nsp660V60VgtCgtT101102B.1.1770.00133
ORF1ab/nsp660V60VgtCgtT8585AY.30.000845
ORF1ab/nsp660V60VgtCgtT6464Q.70.071111
ORF1ab/nsp660V60VgtCgtT6060P.10.000945
ORF1ab/nsp660V60VgtCgtT5858P.50.794521
ORF1ab/nsp660V60VgtCgtT5656B.1.4290.001318
ORF1ab/nsp660V60VgtCgtT4949B.1.1.2550.148485
ORF1ab/nsp660V60VgtCgtT4545AY.440.000274
ORF1ab/nsp660V60VgtCgtT4043AY.420.001609
ORF1ab/nsp660V60VgtCgtT3636B.1.1600.001123
ORF1ab/nsp660V60VgtCgtT3535AY.1180.002193
ORF1ab/nsp660V60VgtCgtT3535AY.260.000991
ORF1ab/nsp660V60VgtCgtT3535B.1.466.20.013693
ORF1ab/nsp660V60VgtCgtT3131AA.30.837838
ORF1ab/nsp660V60VgtCgtT3131B.1.3340.563636
ORF1ab/nsp660V60VgtCgtT2930B.1.2430.002018
ORF1ab/nsp660V60VgtCgtT2929AY.1020.000769
ORF1ab/nsp660V60VgtCgtT2828B.1.10.000508
ORF1ab/nsp660V60VgtCgtT2626AY.1030.000161
ORF1ab/nsp660V60VgtCgtT2626B.1.6210.002301
ORF1ab/nsp660V60VgtCgtT1718AY.330.001135
ORF1ab/nsp660V60VgtCgtT1818B.1.5260.000423
ORF1ab/nsp660V60VgtCgtT1717B.1.3510.000505
ORF1ab/nsp660V60VgtCgtT1616AY.390.000395
ORF1ab/nsp660V60VgtCgtT1515AY.1000.00069
ORF1ab/nsp660V60VgtCgtT1515B.1.160.160.013941
ORF1ab/nsp660V60VgtCgtT1112AY.50.000227
ORF1ab/nsp660V60VgtCgtT512AY.980.000395
ORF1ab/nsp660V60VgtCgtT1212B.1.3180.461538
ORF1ab/nsp660V60VgtCgtT1111AZ.20.009031
ORF1ab/nsp660V60VgtCgtT1111B.1.2210.000781
ORF1ab/nsp660V60VgtCgtT1111B.1.2580.000732
ORF1ab/nsp660V60VgtCgtT1111B.1.258.170.001144
ORF1ab/nsp660V60VgtCgtT1010AY.300.003957
ORF1ab/nsp660V60VgtCgtT1010AY.380.004993
ORF1ab/nsp660V60VgtCgtT910AY.4.20.000195
ORF1ab/nsp660V60VgtCgtT710B.1.4270.000353
ORF1ab/nsp660V60VgtCgtT1010B.1.617.10.00129
ORF1ab/nsp660V60VgtCgtT99AY.160.003417
ORF1ab/nsp660V60VgtCgtT89AY.290.000126
ORF1ab/nsp660V60VgtCgtT89B.1.360.001167
ORF1ab/nsp660V60VgtCgtT39D.20.000225
ORF1ab/nsp660V60VgtCgtT88AY.1190.000282
ORF1ab/nsp660V60VgtCgtT78B.1.5960.00061
ORF1ab/nsp660V60VgtCgtT88C.370.000929
ORF1ab/nsp660V60VgtCgtT77AY.1170.000592
ORF1ab/nsp660V60VgtCgtT77R.10.00063
ORF1ab/nsp660V60VgtCgtT66A.2.50.002994
ORF1ab/nsp660V60VgtCgtT66AY.1130.000854
ORF1ab/nsp660V60VgtCgtT56AY.1210.000677
ORF1ab/nsp660V60VgtCgtT56AY.750.00028
ORF1ab/nsp660V60VgtCgtT66B.1.160.150.029703
ORF1ab/nsp660V60VgtCgtT66B.1.177.270.056604
ORF1ab/nsp660V60VgtCgtT66B.1.6090.002876
ORF1ab/nsp660V60VgtCgtT66C.290.375
ORF1ab/nsp660V60VgtCgtT46P.1.140.000191
ORF1ab/nsp660V60VgtCgtT55AY.1200.000186
ORF1ab/nsp660V60VgtCgtT55AY.460.00052
ORF1ab/nsp660V60VgtCgtT55AY.60.000206
ORF1ab/nsp660V60VgtCgtT55AY.9.10.000419
ORF1ab/nsp660V60VgtCgtT55AY.9.20.000184
ORF1ab/nsp660V60VgtCgtT45B0.000511
ORF1ab/nsp660V60VgtCgtT55B.1.1.5190.000199
ORF1ab/nsp660V60VgtCgtT55B.1.177.40.001055
ORF1ab/nsp660V60VgtCgtT55B.1.2400.001078
ORF1ab/nsp660V60VgtCgtT45B.1.5950.001044
ORF1ab/nsp660V60VgtCgtT44AY.230.000279
ORF1ab/nsp660V60VgtCgtT44AY.470.000124
ORF1ab/nsp660V60VgtCgtT44AY.540.000381
ORF1ab/nsp660V60VgtCgtT44B.1.1.2220.000816
ORF1ab/nsp660V60VgtCgtT44B.1.177.210.000306
ORF1ab/nsp660V60VgtCgtT44B.1.3660.019512
ORF1ab/nsp660V60VgtCgtT44B.1.5250.000453
ORF1ab/nsp660V60VgtCgtT44B.1.6190.003484
ORF1ab/nsp660V60VgtCgtT44P.1.100.001078
ORF1ab/nsp660V60VgtCgtT44P.1.70.001277
ORF1ab/nsp660V60VgtCgtT23AY.39.10.000079
ORF1ab/nsp660V60VgtCgtT33AY.46.60.000217
ORF1ab/nsp660V60VgtCgtT33AY.90.000203
ORF1ab/nsp660V60VgtCgtT33AY.98.10.000145
ORF1ab/nsp660V60VgtCgtT33B.1.1.2140.000166
ORF1ab/nsp660V60VgtCgtT33B.1.1.2250.021583
ORF1ab/nsp660V60VgtCgtT33B.1.1.2690.00406
ORF1ab/nsp660V60VgtCgtT33B.1.1.280.000934
ORF1ab/nsp660V60VgtCgtT33B.1.1.3060.001315
ORF1ab/nsp660V60VgtCgtT33B.1.1.3970.006757
ORF1ab/nsp660V60VgtCgtT33B.1.1.4160.002715
ORF1ab/nsp660V60VgtCgtT33B.1.1260.003827
ORF1ab/nsp660V60VgtCgtT33B.1.177.570.000843
ORF1ab/nsp660V60VgtCgtT33B.1.36.310.005254
ORF1ab/nsp660V60VgtCgtT33B.1.5610.001191
ORF1ab/nsp660V60VgtCgtT33B.1.5820.001472
ORF1ab/nsp660V60VgtCgtT33B.1.9.40.018405
ORF1ab/nsp660V60VgtCgtT33C.160.003181
ORF1ab/nsp660V60VgtCgtT33P.1.150.000697
ORF1ab/nsp660V60VgtCgtT12A0.000387
ORF1ab/nsp660V60VgtCgtT12AY.140.000088
ORF1ab/nsp660V60VgtCgtT22AY.20.000712
ORF1ab/nsp660V60VgtCgtT22AY.3.10.000171
ORF1ab/nsp660V60VgtCgtT22AY.46.10.002053
ORF1ab/nsp660V60VgtCgtT22AY.480.00093
ORF1ab/nsp660V60VgtCgtT12AY.520.000814
ORF1ab/nsp660V60VgtCgtT22AY.590.001059
ORF1ab/nsp660V60VgtCgtT22AY.610.00021
ORF1ab/nsp660V60VgtCgtT22AY.740.000231
ORF1ab/nsp660V60VgtCgtT22AY.840.000875
ORF1ab/nsp660V60VgtCgtT22AY.990.002099
ORF1ab/nsp660V60VgtCgtT22B.1.1.2840.000215
ORF1ab/nsp660V60VgtCgtT22B.1.1.2910.001485
ORF1ab/nsp660V60VgtCgtT22B.1.1.3170.000823
ORF1ab/nsp660V60VgtCgtT22B.1.1.3760.011905
ORF1ab/nsp660V60VgtCgtT22B.1.1.4370.020833
ORF1ab/nsp660V60VgtCgtT22B.1.177.440.001038
ORF1ab/nsp660V60VgtCgtT22B.1.214.20.001199
ORF1ab/nsp660V60VgtCgtT22B.1.2320.001075
ORF1ab/nsp660V60VgtCgtT22B.1.36.180.00084
ORF1ab/nsp660V60VgtCgtT22B.1.438.10.000215
ORF1ab/nsp660V60VgtCgtT22B.1.4590.008163
ORF1ab/nsp660V60VgtCgtT22B.1.6200.001892
ORF1ab/nsp660V60VgtCgtT22B.1.621.10.001012
ORF1ab/nsp660V60VgtCgtT22B.1.80.003945
ORF1ab/nsp660V60VgtCgtT22Q.10.000253
ORF1ab/nsp660V60VgtCgtT22Q.80.00033
ORF1ab/nsp660V60VgtCgtT11A.23.10.000704
ORF1ab/nsp660V60VgtCgtT11AD.20.000219
ORF1ab/nsp660V60VgtCgtT11AU.30.00211
ORF1ab/nsp660V60VgtCgtT11AY.1010.00049
ORF1ab/nsp660V60VgtCgtT11AY.1050.000643
ORF1ab/nsp660V60VgtCgtT11AY.1060.000335
ORF1ab/nsp660V60VgtCgtT11AY.1080.001103
ORF1ab/nsp660V60VgtCgtT11AY.1100.000113
ORF1ab/nsp660V60VgtCgtT11AY.1110.000183
ORF1ab/nsp660V60VgtCgtT11AY.130.000161
ORF1ab/nsp660V60VgtCgtT11AY.16.10.00047
ORF1ab/nsp660V60VgtCgtT11AY.240.000431
ORF1ab/nsp660V60VgtCgtT11AY.270.000065
ORF1ab/nsp660V60VgtCgtT11AY.320.000532
ORF1ab/nsp660V60VgtCgtT11AY.340.000097
ORF1ab/nsp660V60VgtCgtT11AY.34.10.00051
ORF1ab/nsp660V60VgtCgtT11AY.350.000233
ORF1ab/nsp660V60VgtCgtT11AY.360.000148
ORF1ab/nsp660V60VgtCgtT11AY.450.000122
ORF1ab/nsp660V60VgtCgtT11AY.46.20.000635
ORF1ab/nsp660V60VgtCgtT11AY.46.40.000165
ORF1ab/nsp660V60VgtCgtT11AY.5.40.000277
ORF1ab/nsp660V60VgtCgtT11AY.550.000917
ORF1ab/nsp660V60VgtCgtT11AY.650.000533
ORF1ab/nsp660V60VgtCgtT11AY.7.10.000113
ORF1ab/nsp660V60VgtCgtT11AY.720.001361
ORF1ab/nsp660V60VgtCgtT11AY.75.10.00018
ORF1ab/nsp660V60VgtCgtT11AY.790.001211
ORF1ab/nsp660V60VgtCgtT11AZ.10.000867
ORF1ab/nsp660V60VgtCgtT11B.1.1.10.000327
ORF1ab/nsp660V60VgtCgtT11B.1.1.100.001115
ORF1ab/nsp660V60VgtCgtT11B.1.1.1740.003378
ORF1ab/nsp660V60VgtCgtT11B.1.1.1800.010753
ORF1ab/nsp660V60VgtCgtT11B.1.1.1920.002309
ORF1ab/nsp660V60VgtCgtT11B.1.1.250.000569
ORF1ab/nsp660V60VgtCgtT11B.1.1.3070.002532
ORF1ab/nsp660V60VgtCgtT11B.1.1.3110.000358
ORF1ab/nsp660V60VgtCgtT11B.1.1.330.000421
ORF1ab/nsp660V60VgtCgtT11B.1.1.3690.000446
ORF1ab/nsp660V60VgtCgtT11B.1.1.370.000193
ORF1ab/nsp660V60VgtCgtT11B.1.1.3810.04
ORF1ab/nsp660V60VgtCgtT11B.1.1.390.00051
ORF1ab/nsp660V60VgtCgtT11B.1.1.4340.000349
ORF1ab/nsp660V60VgtCgtT11B.1.1.510.001718
ORF1ab/nsp660V60VgtCgtT11B.1.1.5170.006803
ORF1ab/nsp660V60VgtCgtT11B.1.1.540.003021
ORF1ab/nsp660V60VgtCgtT11B.1.1310.008772
ORF1ab/nsp660V60VgtCgtT11B.1.1530.018868
ORF1ab/nsp660V60VgtCgtT11B.1.160.330.004425
ORF1ab/nsp660V60VgtCgtT11B.1.160.70.002079
ORF1ab/nsp660V60VgtCgtT11B.1.1690.014925
ORF1ab/nsp660V60VgtCgtT11B.1.177.150.000631
ORF1ab/nsp660V60VgtCgtT11B.1.177.170.000821
ORF1ab/nsp660V60VgtCgtT11B.1.177.190.001431
ORF1ab/nsp660V60VgtCgtT11B.1.177.540.000606
ORF1ab/nsp660V60VgtCgtT11B.1.177.600.000218
ORF1ab/nsp660V60VgtCgtT11B.1.177.70.000165
ORF1ab/nsp660V60VgtCgtT11B.1.177.730.000566
ORF1ab/nsp660V60VgtCgtT11B.1.177.870.000728
ORF1ab/nsp660V60VgtCgtT11B.1.2060.000816
ORF1ab/nsp660V60VgtCgtT11B.1.2220.001692
ORF1ab/nsp660V60VgtCgtT11B.1.2370.004975
ORF1ab/nsp660V60VgtCgtT11B.1.2410.000812
ORF1ab/nsp660V60VgtCgtT11B.1.258.70.001912
ORF1ab/nsp660V60VgtCgtT11B.1.2820.014925
ORF1ab/nsp660V60VgtCgtT11B.1.3060.005714
ORF1ab/nsp660V60VgtCgtT11B.1.3380.008621
ORF1ab/nsp660V60VgtCgtT11B.1.351.20.000303
ORF1ab/nsp660V60VgtCgtT11B.1.36.170.000494
ORF1ab/nsp660V60VgtCgtT11B.1.36.220.001208
ORF1ab/nsp660V60VgtCgtT11B.1.3960.000706
ORF1ab/nsp660V60VgtCgtT11B.1.4040.001302
ORF1ab/nsp660V60VgtCgtT11B.1.4410.009615
ORF1ab/nsp660V60VgtCgtT11B.1.4560.003268
ORF1ab/nsp660V60VgtCgtT11B.1.4650.003802
ORF1ab/nsp660V60VgtCgtT11B.1.4700.001404
ORF1ab/nsp660V60VgtCgtT11B.1.4970.000315
ORF1ab/nsp660V60VgtCgtT11B.1.4990.00105
ORF1ab/nsp660V60VgtCgtT11B.1.5170.000427
ORF1ab/nsp660V60VgtCgtT11B.1.5640.000426
ORF1ab/nsp660V60VgtCgtT11B.1.5650.00081
ORF1ab/nsp660V60VgtCgtT11B.1.5680.001111
ORF1ab/nsp660V60VgtCgtT11B.1.5750.000303
ORF1ab/nsp660V60VgtCgtT11B.1.575.10.002439
ORF1ab/nsp660V60VgtCgtT11B.1.5800.004065
ORF1ab/nsp660V60VgtCgtT11B.1.5810.009434
ORF1ab/nsp660V60VgtCgtT11B.1.5880.00091
ORF1ab/nsp660V60VgtCgtT11B.1.595.20.04
ORF1ab/nsp660V60VgtCgtT11B.1.6370.000073
ORF1ab/nsp660V60VgtCgtT11B.1.700.02439
ORF1ab/nsp660V60VgtCgtT11B.1.840.020833
ORF1ab/nsp660V60VgtCgtT11B.1.930.000934
ORF1ab/nsp660V60VgtCgtT11C.1.20.004255
ORF1ab/nsp660V60VgtCgtT11C.36.30.000567
ORF1ab/nsp660V60VgtCgtT11N.40.004255
ORF1ab/nsp660V60VgtCgtT11P.1.10.10.00813
ORF1ab/nsp660V60VgtCgtT11P.1.170.000162
ORF1ab/nsp660V60VgtCgtT11P.1.20.001156
ORF1ab/nsp660V60VgtCgtT11W.10.008696