CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : CodonNum = 54 & Codon = gcC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp654A54AA3623AsyngcTgcC6985120.73352411132-11134

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp654A54AgcTgcC512698All0.000098
ORF1ab/nsp654A54AgcTgcC281281B.1.1.2580.915309
ORF1ab/nsp654A54AgcTgcC194B.1.617.20.000004
ORF1ab/nsp654A54AgcTgcC150AY.350.000233
ORF1ab/nsp654A54AgcTgcC4848B.10.00044
ORF1ab/nsp654A54AgcTgcC2730AY.40.000042
ORF1ab/nsp654A54AgcTgcC1923B.1.1.70.000017
ORF1ab/nsp654A54AgcTgcC2323B.1.177.720.077966
ORF1ab/nsp654A54AgcTgcC1515C.340.555556
ORF1ab/nsp654A54AgcTgcC811B.1.20.00007
ORF1ab/nsp654A54AgcTgcC1010B.1.1770.000132
ORF1ab/nsp654A54AgcTgcC66AY.29.10.001323
ORF1ab/nsp654A54AgcTgcC66B.1.5760.00544
ORF1ab/nsp654A54AgcTgcC66B.1.5960.000523
ORF1ab/nsp654A54AgcTgcC55D.20.000375
ORF1ab/nsp654A54AgcTgcC34AY.440.000018
ORF1ab/nsp654A54AgcTgcC33AY.1030.000019
ORF1ab/nsp654A54AgcTgcC33AY.250.000018
ORF1ab/nsp654A54AgcTgcC33B.1.4290.000071
ORF1ab/nsp654A54AgcTgcC33B.1.5950.000783
ORF1ab/nsp654A54AgcTgcC12AY.230.00007
ORF1ab/nsp654A54AgcTgcC22B0.000256
ORF1ab/nsp654A54AgcTgcC22B.1.10.000036
ORF1ab/nsp654A54AgcTgcC22B.1.1.2200.003717
ORF1ab/nsp654A54AgcTgcC22B.1.2430.000139
ORF1ab/nsp654A54AgcTgcC22B.1.2890.005319
ORF1ab/nsp654A54AgcTgcC22B.1.3510.000059
ORF1ab/nsp654A54AgcTgcC22B.1.4270.000101
ORF1ab/nsp654A54AgcTgcC22B.1.5820.000981
ORF1ab/nsp654A54AgcTgcC11A.20.000662
ORF1ab/nsp654A54AgcTgcC11A.2.20.001689
ORF1ab/nsp654A54AgcTgcC11AU.20.002421
ORF1ab/nsp654A54AgcTgcC11AY.30.00001
ORF1ab/nsp654A54AgcTgcC11AY.330.000067
ORF1ab/nsp654A54AgcTgcC11AY.39.10.00004
ORF1ab/nsp654A54AgcTgcC11AY.610.000105
ORF1ab/nsp654A54AgcTgcC11AY.710.000475
ORF1ab/nsp654A54AgcTgcC11B.1.1.1710.003676
ORF1ab/nsp654A54AgcTgcC11B.1.1.290.010309
ORF1ab/nsp654A54AgcTgcC11B.1.1.3770.001381
ORF1ab/nsp654A54AgcTgcC11B.1.1.5190.00004
ORF1ab/nsp654A54AgcTgcC11B.1.177.120.000152
ORF1ab/nsp654A54AgcTgcC11B.1.177.450.000381
ORF1ab/nsp654A54AgcTgcC11B.1.177.70.000165
ORF1ab/nsp654A54AgcTgcC11B.1.2060.000816
ORF1ab/nsp654A54AgcTgcC11B.1.2370.004975
ORF1ab/nsp654A54AgcTgcC11B.1.5170.000427
ORF1ab/nsp654A54AgcTgcC11B.1.5260.000024
ORF1ab/nsp654A54AgcTgcC11B.1.5640.000426
ORF1ab/nsp654A54AgcTgcC11B.1.5690.014493
ORF1ab/nsp654A54AgcTgcC11B.1.6230.000536
ORF1ab/nsp654A54AgcTgcC11B.400.000364
ORF1ab/nsp654A54AgcTgcC11P.1.100.000269