CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : CodonNum = 39 & Codon = gCa

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp639E39AE3608AnonsyngAagCa35310.88571411087-11089

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp639E39AgAagCa3135All0.000006
ORF1ab/nsp639E39AgAagCa1012AY.40.000016
ORF1ab/nsp639E39AgAagCa240.111111
ORF1ab/nsp639E39AgAagCa44B.1.617.20.000015
ORF1ab/nsp639E39AgAagCa33AY.9.20.00011
ORF1ab/nsp639E39AgAagCa33B.1.1.5190.000119
ORF1ab/nsp639E39AgAagCa33B.1.20.000026
ORF1ab/nsp639E39AgAagCa22AY.250.000012
ORF1ab/nsp639E39AgAagCa22B.1.617.10.000258
ORF1ab/nsp639E39AgAagCa11AY.340.000097
ORF1ab/nsp639E39AgAagCa11B.1.2340.000132