CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp6 | 224 | Y224Y | Y3793Y | syn | taC | taT | 2095 | 2095 | 1 | 11642-11644 |
ORF1ab/nsp6 | 224 | Y224del | Y3793del | del | TAC | --- | 125 | 125 | 1 | 11642-11644 |
ORF1ab/nsp6 | 224 | Y224H | Y3793H | nonsyn | Tac | Cac | 55 | 55 | 1 | 11642-11644 |
ORF1ab/nsp6 | 224 | Y224S | Y3793S | nonsyn | tAc | tCc | 7 | 3 | 0.428571 | 11642-11644 |
ORF1ab/nsp6 | 224 | Y224S | Y3793S | nonsyn | tAC | tCA | 7 | 2 | 0.285714 | 11642-11644 |
ORF1ab/nsp6 | 224 | Y224S | Y3793S | nonsyn | tAC | tCT | 7 | 2 | 0.285714 | 11642-11644 |
ORF1ab/nsp6 | 224 | Y224C | Y3793C | nonsyn | tAc | tGc | 6 | 6 | 1 | 11642-11644 |
ORF1ab/nsp6 | 224 | Y224del2 | Y3793del2 | del | tAC | t-- | 6 | 6 | 1 | 11642-11644 |
ORF1ab/nsp6 | 224 | Y224X | Y3793X | nonsyn | tAC | tGA | 5 | 2 | 0.4 | 11642-11644 |
ORF1ab/nsp6 | 224 | Y224X | Y3793X | nonsyn | taC | taA | 5 | 2 | 0.4 | 11642-11644 |
ORF1ab/nsp6 | 224 | Y224X | Y3793X | nonsyn | taC | taG | 5 | 1 | 0.2 | 11642-11644 |
ORF1ab/nsp6 | 224 | Y224del1 | Y3793del1 | del | taC | ta- | 4 | 3 | 0.75 | 11642-11644 |
ORF1ab/nsp6 | 224 | Y224del1 | Y3793del1 | del | TAc | C-c | 4 | 1 | 0.25 | 11642-11644 |
ORF1ab/nsp6 | 224 | Y224F | Y3793F | nonsyn | tAc | tTc | 3 | 3 | 1 | 11642-11644 |
ORF1ab/nsp6 | 224 | Y224L | Y3793L | nonsyn | tAC | tTG | 1 | 1 | 1 | 11642-11644 |
ORF1ab/nsp6 | 224 | Y224N | Y3793N | nonsyn | Tac | Aac | 1 | 1 | 1 | 11642-11644 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 2095 | 2095 | All | 0.000401 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1153 | 1153 | AZ.1 | 1 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 134 | 134 | B.1.1.7 | 0.00012 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 129 | 129 | P.1 | 0.002032 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 125 | 125 | All | 0.000024 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 113 | 113 | AY.43 | 0.000501 |
ORF1ab/nsp6 | 224 | Y224H | Tac | Cac | 55 | 55 | All | 0.000011 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 53 | 53 | AY.4 | 0.000082 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 50 | 50 | B.1.2 | 0.00044 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 33 | 33 | B.1.1.348 | 0.026274 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 32 | 32 | AY.44 | 0.000195 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 29 | 29 | AY.45 | 0.003529 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 28 | 28 | AY.3 | 0.000278 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 26 | 26 | B.1.1.420 | 0.026157 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 23 | 23 | B.1.438.1 | 0.002467 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 21 | 21 | B.1.617.2 | 0.000079 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 18 | 18 | B.1.1.7 | 0.000016 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 17 | 17 | B.1.617.2 | 0.000064 |
ORF1ab/nsp6 | 224 | Y224H | Tac | Cac | 16 | 16 | AY.4 | 0.000025 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 14 | 14 | AY.25 | 0.000084 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 14 | 14 | B.1.177 | 0.000184 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 13 | 13 | AY.4.2 | 0.000282 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 12 | 12 | B.1 | 0.00011 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 11 | 11 | AY.9.2 | 0.000404 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 10 | 10 | B.1.177.21 | 0.000765 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 9 | 9 | AY.29 | 0.000142 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 9 | 9 | B.1.177.81 | 0.001704 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 9 | 9 | B.1.621 | 0.000797 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 8 | 8 | AY.103 | 0.00005 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 8 | 8 | B.1.1.222 | 0.001632 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 8 | 8 | B.1.258 | 0.000532 |
ORF1ab/nsp6 | 224 | Y224S | tAc | tCc | 3 | 7 | All | 0.000001 |
ORF1ab/nsp6 | 224 | Y224S | tAC | tCA | 2 | 7 | All | 0 |
ORF1ab/nsp6 | 224 | Y224S | tAC | tCT | 2 | 7 | All | 0 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 7 | 7 | AY.43 | 0.000031 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 7 | 7 | AY.5 | 0.000145 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 7 | 7 | AY.75.1 | 0.001262 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 7 | 7 | B.1.1.317 | 0.002882 |
ORF1ab/nsp6 | 224 | Y224del2 | tAC | t-- | 6 | 6 | All | 0.000001 |
ORF1ab/nsp6 | 224 | Y224C | tAc | tGc | 6 | 6 | All | 0.000001 |
ORF1ab/nsp6 | 224 | Y224H | Tac | Cac | 6 | 6 | AY.99.2 | 0.000553 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 6 | 6 | B.1 | 0.000055 |
ORF1ab/nsp6 | 224 | Y224H | Tac | Cac | 6 | 6 | B.1.1.7 | 0.000005 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 6 | 6 | P.1.15 | 0.001394 |
ORF1ab/nsp6 | 224 | Y224X | taC | taA | 2 | 5 | All | 0 |
ORF1ab/nsp6 | 224 | Y224X | tAC | tGA | 2 | 5 | All | 0 |
ORF1ab/nsp6 | 224 | Y224X | taC | taG | 1 | 5 | All | 0 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 5 | 5 | AY.4 | 0.000008 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 5 | 5 | C.37 | 0.00058 |
ORF1ab/nsp6 | 224 | Y224S | tAc | tCc | 2 | 4 | 0.111111 | |
ORF1ab/nsp6 | 224 | Y224S | tAC | tCA | 2 | 4 | 0.111111 | |
ORF1ab/nsp6 | 224 | Y224del1 | taC | ta- | 3 | 4 | All | 0.000001 |
ORF1ab/nsp6 | 224 | Y224del1 | TAc | C-c | 1 | 4 | All | 0 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 4 | 4 | AY.100 | 0.000184 |
ORF1ab/nsp6 | 224 | Y224H | Tac | Cac | 4 | 4 | AY.44 | 0.000024 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 4 | 4 | AY.47 | 0.000124 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 4 | 4 | AY.75 | 0.000224 |
ORF1ab/nsp6 | 224 | Y224H | Tac | Cac | 4 | 4 | B.1 | 0.000037 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 4 | 4 | B.1.1.519 | 0.000159 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 4 | 4 | B.1.243 | 0.000278 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 4 | 4 | B.1.429 | 0.000094 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 4 | 4 | B.1.526 | 0.000094 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 4 | 4 | B.1.564 | 0.001704 |
ORF1ab/nsp6 | 224 | Y224F | tAc | tTc | 3 | 3 | All | 0.000001 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 3 | 3 | AY.23 | 0.000209 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 3 | 3 | AY.25 | 0.000018 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 3 | 3 | AY.26 | 0.000085 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 3 | 3 | AY.33 | 0.0002 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 3 | 3 | AY.47 | 0.000093 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 3 | 3 | AY.9.1 | 0.000251 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 3 | 3 | B.1.1 | 0.000054 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 3 | 3 | B.1.1.28 | 0.000934 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 3 | 3 | B.1.1.70 | 0.001023 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 3 | 3 | B.1.177.7 | 0.000495 |
ORF1ab/nsp6 | 224 | Y224H | Tac | Cac | 3 | 3 | B.1.2 | 0.000026 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 3 | 3 | B.1.351 | 0.000089 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 3 | 3 | B.1.36 | 0.000438 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 3 | 3 | B.1.549 | 0.021583 |
ORF1ab/nsp6 | 224 | Y224X | tAC | tGA | 2 | 2 | 0.111111 | |
ORF1ab/nsp6 | 224 | Y224C | tAc | tGc | 2 | 2 | 0.111111 | |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 2 | 2 | AY.119 | 0.000071 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 2 | 2 | AY.24 | 0.000862 |
ORF1ab/nsp6 | 224 | Y224H | Tac | Cac | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 2 | 2 | AY.26 | 0.000057 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 2 | 2 | AY.42 | 0.00008 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 2 | 2 | AY.65 | 0.001066 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 2 | 2 | AY.71 | 0.00095 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 2 | 2 | AY.9.2 | 0.000073 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 2 | 2 | B.1.1.192 | 0.004619 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 2 | 2 | B.1.1.214 | 0.000111 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 2 | 2 | B.1.1.307 | 0.005063 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 2 | 2 | B.1.1.318 | 0.000604 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 2 | 2 | B.1.1.44 | 0.004819 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 2 | 2 | B.1.110.3 | 0.001437 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 2 | 2 | B.1.234 | 0.000264 |
ORF1ab/nsp6 | 224 | Y224F | tAc | tTc | 2 | 2 | B.1.243 | 0.000139 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 2 | 2 | B.1.361 | 0.002577 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 2 | 2 | B.1.397 | 0.009709 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 2 | 2 | B.1.568 | 0.002222 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 2 | 2 | B.1.596 | 0.000174 |
ORF1ab/nsp6 | 224 | Y224H | Tac | Cac | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 1 | 1 | A | 0.000387 |
ORF1ab/nsp6 | 224 | Y224S | tAc | tCc | 1 | 1 | A.23.1 | 0.000704 |
ORF1ab/nsp6 | 224 | Y224C | tAc | tGc | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp6 | 224 | Y224N | Tac | Aac | 1 | 1 | All | 0 |
ORF1ab/nsp6 | 224 | Y224L | tAC | tTG | 1 | 1 | All | 0 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp6 | 224 | Y224H | Tac | Cac | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp6 | 224 | Y224del1 | TAc | C-c | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | AY.117 | 0.000085 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp6 | 224 | Y224H | Tac | Cac | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp6 | 224 | Y224del2 | tAC | t-- | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp6 | 224 | Y224H | Tac | Cac | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp6 | 224 | Y224C | tAc | tGc | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp6 | 224 | Y224X | taC | taA | 1 | 1 | AY.60 | 0.000938 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp6 | 224 | Y224H | Tac | Cac | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | AY.74 | 0.000116 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp6 | 224 | Y224S | tAC | tCT | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 1 | 1 | AY.78 | 0.001541 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | AY.88 | 0.000884 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp6 | 224 | Y224del1 | taC | ta- | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp6 | 224 | Y224del1 | taC | ta- | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp6 | 224 | Y224del1 | taC | ta- | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp6 | 224 | Y224C | tAc | tGc | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp6 | 224 | Y224H | Tac | Cac | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | AZ.2 | 0.000821 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | B | 0.000128 |
ORF1ab/nsp6 | 224 | Y224C | tAc | tGc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp6 | 224 | Y224F | tAc | tTc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp6 | 224 | Y224X | taC | taG | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 1 | 1 | B.1.1.137 | 0.0125 |
ORF1ab/nsp6 | 224 | Y224N | Tac | Aac | 1 | 1 | B.1.1.148 | 0.008772 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | B.1.1.253 | 0.002506 |
ORF1ab/nsp6 | 224 | Y224H | Tac | Cac | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | B.1.1.398 | 0.003226 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | B.1.1.421 | 0.030303 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 1 | 1 | B.1.1.432 | 0.001266 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | B.1.1.432 | 0.001266 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp6 | 224 | Y224H | Tac | Cac | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | B.1.1.526 | 0.003546 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | B.1.1.59 | 0.006494 |
ORF1ab/nsp6 | 224 | Y224del2 | tAC | t-- | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 1 | 1 | B.1.1.71 | 0.006061 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | B.1.147 | 0.000756 |
ORF1ab/nsp6 | 224 | Y224H | Tac | Cac | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp6 | 224 | Y224del2 | tAC | t-- | 1 | 1 | B.1.160.16 | 0.000929 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 1 | 1 | B.1.161 | 0.017241 |
ORF1ab/nsp6 | 224 | Y224del2 | tAC | t-- | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | B.1.177.46 | 0.000918 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | B.1.177.56 | 0.000668 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 1 | 1 | B.1.177.83 | 0.001481 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | B.1.199 | 0.004132 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp6 | 224 | Y224H | Tac | Cac | 1 | 1 | B.1.236 | 0.002053 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | B.1.240 | 0.000216 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | B.1.258.2 | 0.004505 |
ORF1ab/nsp6 | 224 | Y224del2 | tAC | t-- | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | B.1.356 | 0.001727 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp6 | 224 | Y224H | Tac | Cac | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | B.1.398 | 0.002976 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | B.1.470 | 0.001404 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | B.1.471 | 0.002732 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | B.1.499 | 0.00105 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | B.1.509 | 0.000866 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | B.1.544 | 0.006024 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 1 | 1 | B.1.575.1 | 0.002439 |
ORF1ab/nsp6 | 224 | Y224H | Tac | Cac | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp6 | 224 | Y224S | tAC | tCT | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp6 | 224 | Y224del2 | tAC | t-- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp6 | 224 | Y224L | tAC | tTG | 1 | 1 | B.1.619 | 0.000871 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | B.29 | 0.003509 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 1 | 1 | N.4 | 0.004255 |
ORF1ab/nsp6 | 224 | Y224X | taC | taA | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp6 | 224 | Y224del | TAC | --- | 1 | 1 | Q.2 | 0.000613 |
ORF1ab/nsp6 | 224 | Y224H | Tac | Cac | 1 | 1 | Q.8 | 0.000165 |
ORF1ab/nsp6 | 224 | Y224Y | taC | taT | 1 | 1 | W.1 | 0.008696 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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