CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : CodonNum = 208

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp6208Q208RQ3777RnonsyncAgcGg10041100290.99880511594-11596
ORF1ab/nsp6208Q208RQ3777RnonsyncAGcGT10041120.001195111594-11596
ORF1ab/nsp6208Q208HQ3777HnonsyncaGcaT472647040.99534511594-11596
ORF1ab/nsp6208Q208HQ3777HnonsyncaGcaC4726220.004655111594-11596
ORF1ab/nsp6208Q208QQ3777QsyncaGcaA5353111594-11596
ORF1ab/nsp6208Q208delQ3777deldelCAG---4646111594-11596
ORF1ab/nsp6208Q208XQ3777XnonsynCagTag30290.96666711594-11596
ORF1ab/nsp6208Q208XQ3777XnonsynCAGTGA3010.033333311594-11596
ORF1ab/nsp6208Q208KQ3777KnonsynCagAag22190.86363611594-11596
ORF1ab/nsp6208Q208KQ3777KnonsynCaGAaA2230.13636411594-11596
ORF1ab/nsp6208Q208EQ3777EnonsynCagGag2121111594-11596
ORF1ab/nsp6208Q208PQ3777PnonsyncAgcCg2020111594-11596
ORF1ab/nsp6208Q208del1Q3777del1delCag-ag730.42857111594-11596
ORF1ab/nsp6208Q208del1Q3777del1delcAgc-g720.28571411594-11596
ORF1ab/nsp6208Q208del1Q3777del1delcaGca-720.28571411594-11596
ORF1ab/nsp6208Q208LQ3777LnonsyncAgcTg55111594-11596
ORF1ab/nsp6208Q208del2Q3777del2delcAGc--11111594-11596
ORF1ab/nsp6208Q208YQ3777YnonsynCaGTaT11111594-11596
ORF1ab/nsp6208Q208TQ3777TnonsynCAGACA11111594-11596
ORF1ab/nsp6208Q208NQ3777NnonsynCaGAaT11111594-11596
ORF1ab/nsp6208Q208DQ3777DnonsynCaGGaT11111594-11596

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp6208Q208RcAgcGg1002910041All0.001918
ORF1ab/nsp6208Q208RcAGcGT1210041All0.000002
ORF1ab/nsp6208Q208HcaGcaT47044726All0.0009
ORF1ab/nsp6208Q208HcaGcaC224726All0.000004
ORF1ab/nsp6208Q208RcAgcGg31633163B.1.177.210.241875
ORF1ab/nsp6208Q208RcAgcGg13101310AY.1090.968935
ORF1ab/nsp6208Q208RcAgcGg12971297AY.30.0129
ORF1ab/nsp6208Q208HcaGcaT12871287AY.290.020301
ORF1ab/nsp6208Q208RcAgcGg10351035AY.40.001611
ORF1ab/nsp6208Q208HcaGcaT855855B.1.360.124745
ORF1ab/nsp6208Q208RcAgcGg401413AY.440.002441
ORF1ab/nsp6208Q208RcAGcGT12413AY.440.000073
ORF1ab/nsp6208Q208RcAgcGg352352AY.250.002117
ORF1ab/nsp6208Q208RcAgcGg244244AY.1020.006469
ORF1ab/nsp6208Q208RcAgcGg240240B.1.617.20.000904
ORF1ab/nsp6208Q208HcaGcaT209209P.70.912664
ORF1ab/nsp6208Q208HcaGcaT191196AY.40.000297
ORF1ab/nsp6208Q208HcaGcaC5196AY.40.000008
ORF1ab/nsp6208Q208HcaGcaT183184B.1.1.70.000164
ORF1ab/nsp6208Q208HcaGcaC1184B.1.1.70.000001
ORF1ab/nsp6208Q208HcaGcaT163165AY.250.00098
ORF1ab/nsp6208Q208HcaGcaC2165AY.250.000012
ORF1ab/nsp6208Q208HcaGcaT165165B.1.1.3760.982143
ORF1ab/nsp6208Q208RcAgcGg152152AY.50.003139
ORF1ab/nsp6208Q208HcaGcaT145145B.1.617.20.000546
ORF1ab/nsp6208Q208RcAgcGg135135B.1.1.70.000121
ORF1ab/nsp6208Q208HcaGcaT133133AY.70.026068
ORF1ab/nsp6208Q208RcAgcGg132132B.1.36.290.068288
ORF1ab/nsp6208Q208RcAgcGg124124B.1.20.001092
ORF1ab/nsp6208Q208RcAgcGg112112AY.1180.007017
ORF1ab/nsp6208Q208HcaGcaT105105AY.1030.000652
ORF1ab/nsp6208Q208HcaGcaT103103AY.1000.004739
ORF1ab/nsp6208Q208RcAgcGg100100B.1.438.10.010726
ORF1ab/nsp6208Q208RcAgcGg8383B.1.360.01211
ORF1ab/nsp6208Q208HcaGcaT8282B.1.4560.267974
ORF1ab/nsp6208Q208RcAgcGg8080AY.390.001977
ORF1ab/nsp6208Q208HcaGcaT7979AY.440.000481
ORF1ab/nsp6208Q208RcAgcGg7878B.10.000714
ORF1ab/nsp6208Q208HcaGcaT7272B.10.000659
ORF1ab/nsp6208Q208RcAgcGg6969B.1.243.21
ORF1ab/nsp6208Q208HcaGcaT6565R.10.005851
ORF1ab/nsp6208Q208RcAgcGg5757AY.430.000253
ORF1ab/nsp6208Q208QcaGcaA5353All0.00001
ORF1ab/nsp6208Q208HcaGcaT5353B.1.961
ORF1ab/nsp6208Q208RcAgcGg5050AY.330.003339
ORF1ab/nsp6208Q208HcaGcaT4949B.1.110.30.035201
ORF1ab/nsp6208Q208HcaGcaT4848AY.430.000213
ORF1ab/nsp6208Q208delCAG---4646All0.000009
ORF1ab/nsp6208Q208HcaGcaT4444B.1.36.290.022763
ORF1ab/nsp6208Q208HcaGcaT4243B.1.20.00037
ORF1ab/nsp6208Q208HcaGcaC143B.1.20.000009
ORF1ab/nsp6208Q208RcAgcGg4242AY.1030.000261
ORF1ab/nsp6208Q208RcAgcGg3939AY.9.20.001432
ORF1ab/nsp6208Q208HcaGcaT3737AY.390.000914
ORF1ab/nsp6208Q208RcAgcGg3737B.1.10.000671
ORF1ab/nsp6208Q208HcaGcaT3535AY.98.10.001695
ORF1ab/nsp6208Q208RcAgcGg3232B.1.3340.581818
ORF1ab/nsp6208Q208HcaGcaT3131P.10.000488
ORF1ab/nsp6208Q208XCagTag2930All0.000006
ORF1ab/nsp6208Q208XCAGTGA130All0
ORF1ab/nsp6208Q208RcAgcGg3030B.1.1770.000395
ORF1ab/nsp6208Q208RcAgcGg2828AY.1190.000989
ORF1ab/nsp6208Q208HcaGcaT2828B.1.5260.000658
ORF1ab/nsp6208Q208HcaGcaT2626AY.840.011374
ORF1ab/nsp6208Q208HcaGcaT2626B.1.1770.000342
ORF1ab/nsp6208Q208RcAgcGg2424AY.4.20.000521
ORF1ab/nsp6208Q208KCagAag1922All0.000004
ORF1ab/nsp6208Q208KCaGAaA322All0.000001
ORF1ab/nsp6208Q208ECagGag2121All0.000004
ORF1ab/nsp6208Q208PcAgcCg2020All0.000004
ORF1ab/nsp6208Q208QcaGcaA1919AY.40.00003
ORF1ab/nsp6208Q208HcaGcaT1919B.1.1.330.007997
ORF1ab/nsp6208Q208HcaGcaT1919B.1.466.10.136691
ORF1ab/nsp6208Q208HcaGcaT1818AY.230.001255
ORF1ab/nsp6208Q208HcaGcaT1818AY.30.000179
ORF1ab/nsp6208Q208RcAgcGg1818AY.460.001873
ORF1ab/nsp6208Q208RcAgcGg1818B.1.2210.001279
ORF1ab/nsp6208Q208HcaGcaT1717B.1.1.5190.000675
ORF1ab/nsp6208Q208RcAgcGg1616AY.1210.002165
ORF1ab/nsp6208Q208RcAgcGg1515AY.4.40.006137
ORF1ab/nsp6208Q208RcAgcGg1515B.1.2400.003233
ORF1ab/nsp6208Q208HcaGcaT1515B.1.36.170.007411
ORF1ab/nsp6208Q208ECagGag1414AY.40.000022
ORF1ab/nsp6208Q208delCAG---1414B.1.1.70.000013
ORF1ab/nsp6208Q208HcaGcaT1212AY.1020.000318
ORF1ab/nsp6208Q208RcAgcGg1212AY.880.01061
ORF1ab/nsp6208Q208HcaGcaT1212AY.920.003447
ORF1ab/nsp6208Q208RcAgcGg1212AY.99.20.001106
ORF1ab/nsp6208Q208RcAgcGg1212B.1.4290.000282
ORF1ab/nsp6208Q208RcAgcGg1111AY.290.000174
ORF1ab/nsp6208Q208HcaGcaT1111B.1.10.0002
ORF1ab/nsp6208Q208HcaGcaT1111B.1.1.280.003424
ORF1ab/nsp6208Q208RcAgcGg1111B.1.177.540.006671
ORF1ab/nsp6208Q208RcAgcGg1010AY.3.10.000853
ORF1ab/nsp6208Q208HcaGcaT610AY.46.60.000433
ORF1ab/nsp6208Q208HcaGcaC410AY.46.60.000289
ORF1ab/nsp6208Q208RcAgcGg1010AY.920.002873
ORF1ab/nsp6208Q208RcAgcGg1010AY.950.00761
ORF1ab/nsp6208Q208RcAgcGg1010B0.001278
ORF1ab/nsp6208Q208RcAgcGg1010B.1.1.2220.00204
ORF1ab/nsp6208Q208HcaGcaT1010B.1.4290.000235
ORF1ab/nsp6208Q208HcaGcaT89AY.260.000226
ORF1ab/nsp6208Q208HcaGcaC19AY.260.000028
ORF1ab/nsp6208Q208QcaGcaA99AY.3.10.000767
ORF1ab/nsp6208Q208HcaGcaT99AY.4.20.000195
ORF1ab/nsp6208Q208RcAgcGg99B.1.177.50.01118
ORF1ab/nsp6208Q208HcaGcaT99B.1.438.10.000965
ORF1ab/nsp6208Q208RcAgcGg88AY.1110.001465
ORF1ab/nsp6208Q208HcaGcaT88AY.29.10.001764
ORF1ab/nsp6208Q208RcAgcGg88AY.46.60.000578
ORF1ab/nsp6208Q208HcaGcaT88B.1.1.700.002729
ORF1ab/nsp6208Q208del1Cag-ag37All0.000001
ORF1ab/nsp6208Q208del1caGca-27All0
ORF1ab/nsp6208Q208del1cAgc-g27All0
ORF1ab/nsp6208Q208RcAgcGg77AY.1000.000322
ORF1ab/nsp6208Q208RcAgcGg77AY.1200.00026
ORF1ab/nsp6208Q208RcAgcGg77AY.450.000852
ORF1ab/nsp6208Q208RcAgcGg77AY.7.10.000789
ORF1ab/nsp6208Q208HcaGcaT77AY.9.20.000257
ORF1ab/nsp6208Q208RcAgcGg77AY.910.005113
ORF1ab/nsp6208Q208RcAgcGg77AY.98.10.000339
ORF1ab/nsp6208Q208RcAgcGg77B.1.1600.000218
ORF1ab/nsp6208Q208RcAgcGg77B.1.177.870.005095
ORF1ab/nsp6208Q208RcAgcGg77B.1.2580.000466
ORF1ab/nsp6208Q208HcaGcaT77B.1.2800.05
ORF1ab/nsp6208Q208RcAgcGg77B.1.5260.000165
ORF1ab/nsp6208Q208HcaGcaT66AY.1210.000812
ORF1ab/nsp6208Q208RcAgcGg66AY.230.000418
ORF1ab/nsp6208Q208PcAgcCg66AY.3.10.000512
ORF1ab/nsp6208Q208RcAgcGg66AY.360.000889
ORF1ab/nsp6208Q208RcAgcGg66AY.690.00112
ORF1ab/nsp6208Q208HcaGcaT66B.1.1.500.004073
ORF1ab/nsp6208Q208HcaGcaT66B.1.177.810.001136
ORF1ab/nsp6208Q208HcaGcaT66B.1.3510.000178
ORF1ab/nsp6208Q208HcaGcaT66B.1.4990.006303
ORF1ab/nsp6208Q208RcAgcGg66B.1.5820.002944
ORF1ab/nsp6208Q208LcAgcTg55All0.000001
ORF1ab/nsp6208Q208HcaGcaT55AY.1060.001674
ORF1ab/nsp6208Q208HcaGcaT55AY.1180.000313
ORF1ab/nsp6208Q208RcAgcGg55AY.260.000142
ORF1ab/nsp6208Q208RcAgcGg55AY.410.00147
ORF1ab/nsp6208Q208HcaGcaT55AY.5.40.001384
ORF1ab/nsp6208Q208RcAgcGg55AY.640.002976
ORF1ab/nsp6208Q208RcAgcGg55AY.840.002187
ORF1ab/nsp6208Q208RcAgcGg55AY.980.000395
ORF1ab/nsp6208Q208XCagTag55B.10.000046
ORF1ab/nsp6208Q208delCAG---55B.10.000046
ORF1ab/nsp6208Q208RcAgcGg55B.1.177.860.000917
ORF1ab/nsp6208Q208HcaGcaT55B.1.2430.000348
ORF1ab/nsp6208Q208HcaGcaT55B.1.3960.003529
ORF1ab/nsp6208Q208KCagAag45B.1.5250.000453
ORF1ab/nsp6208Q208KCaGAaA15B.1.5250.000113
ORF1ab/nsp6208Q208HcaGcaT55B.1.6090.002397
ORF1ab/nsp6208Q208delCAG---55B.1.617.20.000019
ORF1ab/nsp6208Q208HcaGcaT55P.50.068493
ORF1ab/nsp6208Q208RcAgcGg55R.10.00045
ORF1ab/nsp6208Q208HcaGcaT44A.2.40.013468
ORF1ab/nsp6208Q208RcAgcGg44AY.1050.002572
ORF1ab/nsp6208Q208HcaGcaT44AY.1160.001147
ORF1ab/nsp6208Q208PcAgcCg44AY.200.000155
ORF1ab/nsp6208Q208RcAgcGg44AY.4.50.00043
ORF1ab/nsp6208Q208RcAgcGg44AY.420.000161
ORF1ab/nsp6208Q208RcAgcGg44AY.5.30.00135
ORF1ab/nsp6208Q208RcAgcGg44AY.60.000165
ORF1ab/nsp6208Q208HcaGcaT44B.1.1.2160.003562
ORF1ab/nsp6208Q208HcaGcaC44B.1.1.2800.012346
ORF1ab/nsp6208Q208RcAgcGg44B.1.1.410.025316
ORF1ab/nsp6208Q208RcAgcGg44B.1.1.5190.000159
ORF1ab/nsp6208Q208RcAgcGg44B.1.1.630.001543
ORF1ab/nsp6208Q208RcAgcGg44B.1.177.810.000757
ORF1ab/nsp6208Q208RcAgcGg44B.1.3710.004489
ORF1ab/nsp6208Q208HcaGcaT44B.1.3950.028169
ORF1ab/nsp6208Q208RcAgcGg44B.1.4000.001716
ORF1ab/nsp6208Q208HcaGcaC34B.1.5960.000261
ORF1ab/nsp6208Q208HcaGcaT14B.1.5960.000087
ORF1ab/nsp6208Q208RcAgcGg44B.1.617.10.000516
ORF1ab/nsp6208Q208HcaGcaT44D.20.0003
ORF1ab/nsp6208Q208HcaGcaT44P.1.10.001271
ORF1ab/nsp6208Q208HcaGcaT33AY.1050.001929
ORF1ab/nsp6208Q208RcAgcGg33AY.1100.000338
ORF1ab/nsp6208Q208RcAgcGg33AY.1170.000254
ORF1ab/nsp6208Q208HcaGcaT33AY.1190.000106
ORF1ab/nsp6208Q208RcAgcGg33AY.160.001139
ORF1ab/nsp6208Q208RcAgcGg33AY.34.10.00153
ORF1ab/nsp6208Q208HcaGcaT33AY.39.10.000119
ORF1ab/nsp6208Q208RcAgcGg33AY.500.002398
ORF1ab/nsp6208Q208HcaGcaT33AY.540.000286
ORF1ab/nsp6208Q208HcaGcaT33AY.60.000123
ORF1ab/nsp6208Q208HcaGcaT33AY.610.000314
ORF1ab/nsp6208Q208RcAgcGg33AY.610.000314
ORF1ab/nsp6208Q208HcaGcaT33AY.750.000168
ORF1ab/nsp6208Q208RcAgcGg33AY.780.004622
ORF1ab/nsp6208Q208RcAgcGg33AY.790.003632
ORF1ab/nsp6208Q208QcaGcaA33B.1.1.2220.000612
ORF1ab/nsp6208Q208RcAgcGg33B.1.1.3480.002389
ORF1ab/nsp6208Q208HcaGcaT33B.1.1.460.0131
ORF1ab/nsp6208Q208XCagTag33B.1.1.70.000003
ORF1ab/nsp6208Q208LcAgcTg33B.1.1.70.000003
ORF1ab/nsp6208Q208RcAgcGg33B.1.1420.008696
ORF1ab/nsp6208Q208QcaGcaA33B.1.1770.00004
ORF1ab/nsp6208Q208RcAgcGg33B.1.177.820.001432
ORF1ab/nsp6208Q208XCagTag33B.1.20.000026
ORF1ab/nsp6208Q208RcAgcGg33B.1.2430.000209
ORF1ab/nsp6208Q208RcAgcGg33B.1.2600.010033
ORF1ab/nsp6208Q208RcAgcGg33B.1.2890.007979
ORF1ab/nsp6208Q208HcaGcaT33B.1.3110.000824
ORF1ab/nsp6208Q208RcAgcGg33B.1.3510.000089
ORF1ab/nsp6208Q208HcaGcaT33B.1.36.80.003
ORF1ab/nsp6208Q208RcAgcGg33B.1.4560.009804
ORF1ab/nsp6208Q208RcAgcGg33B.1.466.20.001174
ORF1ab/nsp6208Q208RcAgcGg33B.1.5960.000261
ORF1ab/nsp6208Q208PcAgcCg33B.1.617.20.000011
ORF1ab/nsp6208Q208RcAgcGg33B.550.00885
ORF1ab/nsp6208Q208RcAgcGg33D.20.000225
ORF1ab/nsp6208Q208QcaGcaA220.111111
ORF1ab/nsp6208Q208RcAgcGg22AA.70.018349
ORF1ab/nsp6208Q208RcAgcGg22AY.1070.000932
ORF1ab/nsp6208Q208HcaGcaT22AY.1110.000366
ORF1ab/nsp6208Q208RcAgcGg22AY.1130.000285
ORF1ab/nsp6208Q208RcAgcGg22AY.1160.000574
ORF1ab/nsp6208Q208HcaGcaT22AY.1170.000169
ORF1ab/nsp6208Q208RcAgcGg22AY.120.2.10.000997
ORF1ab/nsp6208Q208HcaGcaT22AY.200.000078
ORF1ab/nsp6208Q208RcAgcGg22AY.200.000078
ORF1ab/nsp6208Q208RcAgcGg22AY.270.000129
ORF1ab/nsp6208Q208HcaGcaT22AY.270.000129
ORF1ab/nsp6208Q208HcaGcaT22AY.330.000134
ORF1ab/nsp6208Q208HcaGcaT22AY.340.000194
ORF1ab/nsp6208Q208HcaGcaT22AY.360.000296
ORF1ab/nsp6208Q208RcAgcGg22AY.39.10.000079
ORF1ab/nsp6208Q208delCAG---22AY.4.50.000215
ORF1ab/nsp6208Q208HcaGcaT22AY.420.00008
ORF1ab/nsp6208Q208delCAG---22AY.430.000009
ORF1ab/nsp6208Q208KCagAag22AY.440.000012
ORF1ab/nsp6208Q208XCagTag22AY.440.000012
ORF1ab/nsp6208Q208HcaGcaT12AY.460.000104
ORF1ab/nsp6208Q208HcaGcaC12AY.460.000104
ORF1ab/nsp6208Q208HcaGcaT22AY.470.000062
ORF1ab/nsp6208Q208QcaGcaA22AY.50.000041
ORF1ab/nsp6208Q208HcaGcaT22AY.50.000041
ORF1ab/nsp6208Q208delCAG---22AY.650.001066
ORF1ab/nsp6208Q208RcAgcGg22AY.770.002255
ORF1ab/nsp6208Q208HcaGcaT22AY.9.10.000167
ORF1ab/nsp6208Q208RcAgcGg22AY.960.004149
ORF1ab/nsp6208Q208HcaGcaT22AY.980.000158
ORF1ab/nsp6208Q208KCagAag22B.10.000018
ORF1ab/nsp6208Q208del1Cag-ag12B.10.000009
ORF1ab/nsp6208Q208del1caGca-12B.10.000009
ORF1ab/nsp6208Q208HcaGcaT22B.1.1.10.000653
ORF1ab/nsp6208Q208RcAgcGg22B.1.1.2160.001781
ORF1ab/nsp6208Q208HcaGcaT22B.1.1.2280.006098
ORF1ab/nsp6208Q208RcAgcGg22B.1.1.2940.002532
ORF1ab/nsp6208Q208HcaGcaT22B.1.1.3110.000716
ORF1ab/nsp6208Q208HcaGcaT22B.1.1.3180.000604
ORF1ab/nsp6208Q208RcAgcGg22B.1.1.4320.002532
ORF1ab/nsp6208Q208QcaGcaA22B.1.1.50.016667
ORF1ab/nsp6208Q208HcaGcaT22B.1.1.610.017544
ORF1ab/nsp6208Q208QcaGcaA22B.1.1.70.000002
ORF1ab/nsp6208Q208KCagAag12B.1.1.70.000001
ORF1ab/nsp6208Q208KCaGAaA12B.1.1.70.000001
ORF1ab/nsp6208Q208del1Cag-ag12B.1.1770.000013
ORF1ab/nsp6208Q208del1cAgc-g12B.1.1770.000013
ORF1ab/nsp6208Q208RcAgcGg22B.1.177.440.001038
ORF1ab/nsp6208Q208RcAgcGg22B.1.177.570.000562
ORF1ab/nsp6208Q208HcaGcaT22B.1.177.860.000367
ORF1ab/nsp6208Q208HcaGcaT22B.1.2390.002442
ORF1ab/nsp6208Q208RcAgcGg22B.1.3490.00143
ORF1ab/nsp6208Q208RcAgcGg22B.1.36.100.009569
ORF1ab/nsp6208Q208RcAgcGg22B.1.36.190.018519
ORF1ab/nsp6208Q208RcAgcGg22B.1.36.80.002
ORF1ab/nsp6208Q208HcaGcaT22B.1.3690.00057
ORF1ab/nsp6208Q208HcaGcaT22B.1.4270.000101
ORF1ab/nsp6208Q208HcaGcaT22B.1.466.20.000782
ORF1ab/nsp6208Q208RcAgcGg22B.1.5510.002581
ORF1ab/nsp6208Q208RcAgcGg22B.1.5670.006667
ORF1ab/nsp6208Q208HcaGcaT22B.1.5950.000522
ORF1ab/nsp6208Q208RcAgcGg22B.1.5950.000522
ORF1ab/nsp6208Q208QcaGcaA22B.1.617.20.000008
ORF1ab/nsp6208Q208RcAgcGg22B.30.001661
ORF1ab/nsp6208Q208RcAgcGg22C.310.035714
ORF1ab/nsp6208Q208RcAgcGg22C.320.046512
ORF1ab/nsp6208Q208HcaGcaT22P.40.007605
ORF1ab/nsp6208Q208PcAgcCg110.055556
ORF1ab/nsp6208Q208KCagAag110.055556
ORF1ab/nsp6208Q208NCaGAaT110.055556
ORF1ab/nsp6208Q208XCagTag110.055556
ORF1ab/nsp6208Q208HcaGcaT110.055556
ORF1ab/nsp6208Q208delCAG---11A0.000387
ORF1ab/nsp6208Q208RcAgcGg11A.10.000282
ORF1ab/nsp6208Q208RcAgcGg11A.2.50.000499
ORF1ab/nsp6208Q208HcaGcaT11AE.80.000489
ORF1ab/nsp6208Q208YCaGTaT11All0
ORF1ab/nsp6208Q208TCAGACA11All0
ORF1ab/nsp6208Q208DCaGGaT11All0
ORF1ab/nsp6208Q208del2cAGc--11All0
ORF1ab/nsp6208Q208NCaGAaT11All0
ORF1ab/nsp6208Q208RcAgcGg11AU.20.002421
ORF1ab/nsp6208Q208RcAgcGg11AU.30.00211
ORF1ab/nsp6208Q208QcaGcaA11AY.1030.000006
ORF1ab/nsp6208Q208ECagGag11AY.1050.000643
ORF1ab/nsp6208Q208HcaGcaT11AY.1130.000142
ORF1ab/nsp6208Q208RcAgcGg11AY.116.10.000311
ORF1ab/nsp6208Q208PcAgcCg11AY.1190.000035
ORF1ab/nsp6208Q208delCAG---11AY.1190.000035
ORF1ab/nsp6208Q208ECagGag11AY.1190.000035
ORF1ab/nsp6208Q208HcaGcaT11AY.120.000316
ORF1ab/nsp6208Q208HcaGcaT11AY.120.2.10.000498
ORF1ab/nsp6208Q208HcaGcaT11AY.130.000161
ORF1ab/nsp6208Q208RcAgcGg11AY.130.000161
ORF1ab/nsp6208Q208RcAgcGg11AY.16.10.00047
ORF1ab/nsp6208Q208RcAgcGg11AY.190.00114
ORF1ab/nsp6208Q208XCagTag11AY.230.00007
ORF1ab/nsp6208Q208RcAgcGg11AY.240.000431
ORF1ab/nsp6208Q208XCagTag11AY.250.000006
ORF1ab/nsp6208Q208PcAgcCg11AY.250.000006
ORF1ab/nsp6208Q208LcAgcTg11AY.260.000028
ORF1ab/nsp6208Q208PcAgcCg11AY.280.00189
ORF1ab/nsp6208Q208QcaGcaA11AY.30.00001
ORF1ab/nsp6208Q208PcAgcCg11AY.30.00001
ORF1ab/nsp6208Q208HcaGcaT11AY.3.10.000085
ORF1ab/nsp6208Q208RcAgcGg11AY.320.000532
ORF1ab/nsp6208Q208HcaGcaT11AY.34.10.00051
ORF1ab/nsp6208Q208delCAG---11AY.40.000002
ORF1ab/nsp6208Q208PcAgcCg11AY.40.000002
ORF1ab/nsp6208Q208KCaGAaA11AY.40.000002
ORF1ab/nsp6208Q208HcaGcaT11AY.400.000964
ORF1ab/nsp6208Q208delCAG---11AY.420.00004
ORF1ab/nsp6208Q208XCagTag11AY.430.000004
ORF1ab/nsp6208Q208KCagAag11AY.430.000004
ORF1ab/nsp6208Q208del2cAGc--11AY.430.000004
ORF1ab/nsp6208Q208RcAgcGg11AY.46.20.000635
ORF1ab/nsp6208Q208QcaGcaA11AY.46.30.000934
ORF1ab/nsp6208Q208HcaGcaT11AY.46.40.000165
ORF1ab/nsp6208Q208LcAgcTg11AY.50.000021
ORF1ab/nsp6208Q208ECagGag11AY.50.000021
ORF1ab/nsp6208Q208HcaGcaT11AY.5.30.000337
ORF1ab/nsp6208Q208XCagTag11AY.5.40.000277
ORF1ab/nsp6208Q208RcAgcGg11AY.5.40.000277
ORF1ab/nsp6208Q208RcAgcGg11AY.520.000814
ORF1ab/nsp6208Q208DCaGGaT11AY.550.000917
ORF1ab/nsp6208Q208delCAG---11AY.620.000436
ORF1ab/nsp6208Q208XCagTag11AY.620.000436
ORF1ab/nsp6208Q208RcAgcGg11AY.670.000464
ORF1ab/nsp6208Q208HcaGcaT11AY.670.000464
ORF1ab/nsp6208Q208HcaGcaT11AY.680.000274
ORF1ab/nsp6208Q208HcaGcaT11AY.690.000187
ORF1ab/nsp6208Q208HcaGcaT11AY.7.10.000113
ORF1ab/nsp6208Q208RcAgcGg11AY.720.001361
ORF1ab/nsp6208Q208RcAgcGg11AY.740.000116
ORF1ab/nsp6208Q208delCAG---11AY.750.000056
ORF1ab/nsp6208Q208QcaGcaA11AY.750.000056
ORF1ab/nsp6208Q208RcAgcGg11AY.750.000056
ORF1ab/nsp6208Q208XCAGTGA11AY.750.000056
ORF1ab/nsp6208Q208HcaGcaT11AY.75.10.00018
ORF1ab/nsp6208Q208delCAG---11AY.780.001541
ORF1ab/nsp6208Q208RcAgcGg11AY.820.001357
ORF1ab/nsp6208Q208RcAgcGg11AY.870.000833
ORF1ab/nsp6208Q208RcAgcGg11AY.890.004902
ORF1ab/nsp6208Q208HcaGcaT11AY.90.000068
ORF1ab/nsp6208Q208TCAGACA11AY.9.20.000037
ORF1ab/nsp6208Q208RcAgcGg11AY.900.000684
ORF1ab/nsp6208Q208HcaGcaT11AY.99.20.000092
ORF1ab/nsp6208Q208HcaGcaT11AZ.30.00152
ORF1ab/nsp6208Q208HcaGcaT11B0.000128
ORF1ab/nsp6208Q208KCagAag11B0.000128
ORF1ab/nsp6208Q208YCaGTaT11B.10.000009
ORF1ab/nsp6208Q208ECagGag11B.10.000009
ORF1ab/nsp6208Q208QcaGcaA11B.10.000009
ORF1ab/nsp6208Q208XCagTag11B.1.10.000018
ORF1ab/nsp6208Q208RcAgcGg11B.1.1.1410.002012
ORF1ab/nsp6208Q208RcAgcGg11B.1.1.1420.017544
ORF1ab/nsp6208Q208RcAgcGg11B.1.1.1630.007634
ORF1ab/nsp6208Q208HcaGcaT11B.1.1.1940.00495
ORF1ab/nsp6208Q208RcAgcGg11B.1.1.2140.000055
ORF1ab/nsp6208Q208QcaGcaA11B.1.1.2170.003636
ORF1ab/nsp6208Q208HcaGcaT11B.1.1.2200.001859
ORF1ab/nsp6208Q208HcaGcaT11B.1.1.2220.000204
ORF1ab/nsp6208Q208RcAgcGg11B.1.1.2630.001558
ORF1ab/nsp6208Q208RcAgcGg11B.1.1.280.000311
ORF1ab/nsp6208Q208RcAgcGg11B.1.1.2840.000107
ORF1ab/nsp6208Q208RcAgcGg11B.1.1.2860.002899
ORF1ab/nsp6208Q208HcaGcaT11B.1.1.2960.018182
ORF1ab/nsp6208Q208QcaGcaA11B.1.1.3060.000438
ORF1ab/nsp6208Q208RcAgcGg11B.1.1.3110.000358
ORF1ab/nsp6208Q208RcAgcGg11B.1.1.3170.000412
ORF1ab/nsp6208Q208RcAgcGg11B.1.1.3180.000302
ORF1ab/nsp6208Q208delCAG---11B.1.1.3240.052632
ORF1ab/nsp6208Q208RcAgcGg11B.1.1.330.000421
ORF1ab/nsp6208Q208RcAgcGg11B.1.1.3720.000689
ORF1ab/nsp6208Q208HcaGcaT11B.1.1.3720.000689
ORF1ab/nsp6208Q208KCagAag11B.1.1.3720.000689
ORF1ab/nsp6208Q208del1cAgc-g11B.1.1.4020.011111
ORF1ab/nsp6208Q208RcAgcGg11B.1.1.4090.002833
ORF1ab/nsp6208Q208RcAgcGg11B.1.1.4160.000905
ORF1ab/nsp6208Q208HcaGcaT11B.1.1.4320.001266
ORF1ab/nsp6208Q208RcAgcGg11B.1.1.4480.002033
ORF1ab/nsp6208Q208RcAgcGg11B.1.1.4820.023256
ORF1ab/nsp6208Q208RcAgcGg11B.1.1.5180.006329
ORF1ab/nsp6208Q208KCagAag11B.1.1.580.005376
ORF1ab/nsp6208Q208HcaGcaT11B.1.1.590.006494
ORF1ab/nsp6208Q208HcaGcaT11B.1.1.630.000386
ORF1ab/nsp6208Q208del1caGca-11B.1.1.70.000001
ORF1ab/nsp6208Q208RcAgcGg11B.1.1.700.000341
ORF1ab/nsp6208Q208HcaGcaT11B.1.1.830.00271
ORF1ab/nsp6208Q208RcAgcGg11B.1.110.30.000718
ORF1ab/nsp6208Q208HcaGcaT11B.1.1120.005181
ORF1ab/nsp6208Q208RcAgcGg11B.1.1260.001276
ORF1ab/nsp6208Q208HcaGcaT11B.1.1390.000733
ORF1ab/nsp6208Q208HcaGcaT11B.1.1470.000756
ORF1ab/nsp6208Q208KCagAag11B.1.1570.002985
ORF1ab/nsp6208Q208KCagAag11B.1.1600.000031
ORF1ab/nsp6208Q208HcaGcaT11B.1.1600.000031
ORF1ab/nsp6208Q208RcAgcGg11B.1.160.160.000929
ORF1ab/nsp6208Q208XCagTag11B.1.160.200.008929
ORF1ab/nsp6208Q208delCAG---11B.1.1610.017241
ORF1ab/nsp6208Q208HcaGcaT11B.1.1690.014925
ORF1ab/nsp6208Q208ECagGag11B.1.1770.000013
ORF1ab/nsp6208Q208RcAgcGg11B.1.177.120.000152
ORF1ab/nsp6208Q208RcAgcGg11B.1.177.150.000631
ORF1ab/nsp6208Q208RcAgcGg11B.1.177.170.000821
ORF1ab/nsp6208Q208delCAG---11B.1.177.180.00116
ORF1ab/nsp6208Q208RcAgcGg11B.1.177.190.001431
ORF1ab/nsp6208Q208XCagTag11B.1.177.210.000076
ORF1ab/nsp6208Q208RcAgcGg11B.1.177.320.00135
ORF1ab/nsp6208Q208HcaGcaT11B.1.177.40.000211
ORF1ab/nsp6208Q208RcAgcGg11B.1.177.510.004566
ORF1ab/nsp6208Q208delCAG---11B.1.177.570.000281
ORF1ab/nsp6208Q208HcaGcaT11B.1.177.580.001332
ORF1ab/nsp6208Q208HcaGcaT11B.1.177.600.000218
ORF1ab/nsp6208Q208RcAgcGg11B.1.177.630.002703
ORF1ab/nsp6208Q208HcaGcaT11B.1.177.70.000165
ORF1ab/nsp6208Q208RcAgcGg11B.1.177.70.000165
ORF1ab/nsp6208Q208RcAgcGg11B.1.177.730.000566
ORF1ab/nsp6208Q208HcaGcaT11B.1.177.820.000477
ORF1ab/nsp6208Q208delCAG---11B.1.177.830.001481
ORF1ab/nsp6208Q208delCAG---11B.1.177.90.001332
ORF1ab/nsp6208Q208HcaGcaT11B.1.1900.01
ORF1ab/nsp6208Q208QcaGcaA11B.1.20.000009
ORF1ab/nsp6208Q208RcAgcGg11B.1.2060.000816
ORF1ab/nsp6208Q208RcAgcGg11B.1.2100.002132
ORF1ab/nsp6208Q208XCagTag11B.1.230.006061
ORF1ab/nsp6208Q208XCagTag11B.1.2340.000132
ORF1ab/nsp6208Q208RcAgcGg11B.1.2340.000132
ORF1ab/nsp6208Q208HcaGcaT11B.1.2360.002053
ORF1ab/nsp6208Q208XCagTag11B.1.2430.00007
ORF1ab/nsp6208Q208RcAgcGg11B.1.2470.014925
ORF1ab/nsp6208Q208RcAgcGg11B.1.3110.000275
ORF1ab/nsp6208Q208QcaGcaA11B.1.3110.000275
ORF1ab/nsp6208Q208HcaGcaT11B.1.3290.000608
ORF1ab/nsp6208Q208HcaGcaT11B.1.3360.002439
ORF1ab/nsp6208Q208XCagTag11B.1.3490.000715
ORF1ab/nsp6208Q208XCagTag11B.1.3510.00003
ORF1ab/nsp6208Q208HcaGcaT11B.1.36.180.00042
ORF1ab/nsp6208Q208RcAgcGg11B.1.36.240.006173
ORF1ab/nsp6208Q208HcaGcaT11B.1.3820.008929
ORF1ab/nsp6208Q208HcaGcaT11B.1.4000.000429
ORF1ab/nsp6208Q208RcAgcGg11B.1.4270.00005
ORF1ab/nsp6208Q208PcAgcCg11B.1.4290.000024
ORF1ab/nsp6208Q208RcAgcGg11B.1.4590.004082
ORF1ab/nsp6208Q208RcAgcGg11B.1.4680.005714
ORF1ab/nsp6208Q208HcaGcaT11B.1.4680.005714
ORF1ab/nsp6208Q208RcAgcGg11B.1.4740.001901
ORF1ab/nsp6208Q208RcAgcGg11B.1.5250.000113
ORF1ab/nsp6208Q208RcAgcGg11B.1.5640.000426
ORF1ab/nsp6208Q208HcaGcaT11B.1.5640.000426
ORF1ab/nsp6208Q208RcAgcGg11B.1.5750.000303
ORF1ab/nsp6208Q208HcaGcaT11B.1.575.10.002439
ORF1ab/nsp6208Q208HcaGcaT11B.1.5760.000907
ORF1ab/nsp6208Q208HcaGcaT11B.1.5820.000491
ORF1ab/nsp6208Q208RcAgcGg11B.1.5870.001898
ORF1ab/nsp6208Q208del1Cag-ag11B.1.5960.000087
ORF1ab/nsp6208Q208RcAgcGg11B.1.6020.006536
ORF1ab/nsp6208Q208RcAgcGg11B.1.6060.006024
ORF1ab/nsp6208Q208RcAgcGg11B.1.6090.000479
ORF1ab/nsp6208Q208KCagAag11B.1.617.20.000004
ORF1ab/nsp6208Q208XCagTag11B.1.617.20.000004
ORF1ab/nsp6208Q208ECagGag11B.1.617.20.000004
ORF1ab/nsp6208Q208HcaGcaT11B.1.619.10.000641
ORF1ab/nsp6208Q208HcaGcaT11B.1.6210.000089
ORF1ab/nsp6208Q208RcAgcGg11B.1.6210.000089
ORF1ab/nsp6208Q208RcAgcGg11B.1.621.10.000506
ORF1ab/nsp6208Q208KCagAag11B.1.6280.000352
ORF1ab/nsp6208Q208RcAgcGg11B.3.10.001658
ORF1ab/nsp6208Q208RcAgcGg11B.400.000364
ORF1ab/nsp6208Q208XCagTag11B.400.000364
ORF1ab/nsp6208Q208RcAgcGg11B.450.003831
ORF1ab/nsp6208Q208KCagAag11B.60.00091
ORF1ab/nsp6208Q208RcAgcGg11B.6.60.000889
ORF1ab/nsp6208Q208RcAgcGg11C.130.025641
ORF1ab/nsp6208Q208RcAgcGg11C.350.000774
ORF1ab/nsp6208Q208delCAG---11C.360.000911
ORF1ab/nsp6208Q208HcaGcaT11C.370.000116
ORF1ab/nsp6208Q208delCAG---11N.40.004255
ORF1ab/nsp6208Q208RcAgcGg11P.1.140.000048
ORF1ab/nsp6208Q208RcAgcGg11P.1.150.000232
ORF1ab/nsp6208Q208RcAgcGg11P.1.80.004785
ORF1ab/nsp6208Q208HcaGcaT11P.20.000187
ORF1ab/nsp6208Q208RcAgcGg11P.20.000187
ORF1ab/nsp6208Q208delCAG---11Q.20.000613
ORF1ab/nsp6208Q208ECagGag11W.40.001351