CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : CodonNum = 201 & Codon = Ctc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp6201F201LF3770LnonsynTtcCtc1811300.71823211573-11575

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp6201F201LTtcCtc130181All0.000025
ORF1ab/nsp6201F201LTtcCtc2020AY.75.10.003606
ORF1ab/nsp6201F201LTtcCtc2020B.1.351.20.006051
ORF1ab/nsp6201F201LTtcCtc1515AY.430.000066
ORF1ab/nsp6201F201LTtcCtc99AY.440.000055
ORF1ab/nsp6201F201LTtcCtc88AY.250.000048
ORF1ab/nsp6201F201LTtcCtc67B.1.1.70.000005
ORF1ab/nsp6201F201LTtcCtc66AY.9.10.000502
ORF1ab/nsp6201F201LTtcCtc66B.1.1770.000079
ORF1ab/nsp6201F201LTtcCtc250.111111
ORF1ab/nsp6201F201LTtcCtc55AY.40.000008
ORF1ab/nsp6201F201LTtcCtc45B.1.20.000035
ORF1ab/nsp6201F201LTtcCtc55B.1.617.20.000019
ORF1ab/nsp6201F201LTtcCtc44AY.50.000083
ORF1ab/nsp6201F201LTtcCtc44B.1.1.330.001684
ORF1ab/nsp6201F201LTtcCtc13AY.1030.000006
ORF1ab/nsp6201F201LTtcCtc12AY.750.000056
ORF1ab/nsp6201F201LTtcCtc12B.1.2210.000071
ORF1ab/nsp6201F201LTtcCtc11AY.1190.000035
ORF1ab/nsp6201F201LTtcCtc11AY.200.000039
ORF1ab/nsp6201F201LTtcCtc11AY.470.000031
ORF1ab/nsp6201F201LTtcCtc11AY.60.000041
ORF1ab/nsp6201F201LTtcCtc11AY.610.000105
ORF1ab/nsp6201F201LTtcCtc11AY.980.000079
ORF1ab/nsp6201F201LTtcCtc11B.1.1.2580.003257
ORF1ab/nsp6201F201LTtcCtc11B.1.1.3180.000302
ORF1ab/nsp6201F201LTtcCtc11B.1.177.50.001242
ORF1ab/nsp6201F201LTtcCtc11B.1.360.000146
ORF1ab/nsp6201F201LTtcCtc11B.1.4160.001269
ORF1ab/nsp6201F201LTtcCtc11B.1.4560.003268
ORF1ab/nsp6201F201LTtcCtc11B.1.5960.000087