CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp6 | 201 | F201F | F3770F | syn | ttC | ttT | 16770 | 16770 | 1 | 11573-11575 |
ORF1ab/nsp6 | 201 | F201V | F3770V | nonsyn | Ttc | Gtc | 1254 | 1254 | 1 | 11573-11575 |
ORF1ab/nsp6 | 201 | F201L | F3770L | nonsyn | Ttc | Ctc | 181 | 130 | 0.718232 | 11573-11575 |
ORF1ab/nsp6 | 201 | F201L | F3770L | nonsyn | ttC | ttG | 181 | 33 | 0.18232 | 11573-11575 |
ORF1ab/nsp6 | 201 | F201L | F3770L | nonsyn | ttC | ttA | 181 | 15 | 0.0828729 | 11573-11575 |
ORF1ab/nsp6 | 201 | F201L | F3770L | nonsyn | TtC | CtT | 181 | 3 | 0.0165746 | 11573-11575 |
ORF1ab/nsp6 | 201 | F201S | F3770S | nonsyn | tTc | tCc | 79 | 79 | 1 | 11573-11575 |
ORF1ab/nsp6 | 201 | F201del | F3770del | del | TTC | --- | 58 | 58 | 1 | 11573-11575 |
ORF1ab/nsp6 | 201 | F201C | F3770C | nonsyn | tTc | tGc | 54 | 53 | 0.981481 | 11573-11575 |
ORF1ab/nsp6 | 201 | F201C | F3770C | nonsyn | tTC | tGT | 54 | 1 | 0.0185185 | 11573-11575 |
ORF1ab/nsp6 | 201 | F201I | F3770I | nonsyn | Ttc | Atc | 9 | 9 | 1 | 11573-11575 |
ORF1ab/nsp6 | 201 | F201Y | F3770Y | nonsyn | tTc | tAc | 7 | 6 | 0.857143 | 11573-11575 |
ORF1ab/nsp6 | 201 | F201Y | F3770Y | nonsyn | tTC | tAT | 7 | 1 | 0.142857 | 11573-11575 |
ORF1ab/nsp6 | 201 | F201A | F3770A | nonsyn | TTc | GCc | 2 | 2 | 1 | 11573-11575 |
ORF1ab/nsp6 | 201 | F201R | F3770R | nonsyn | TTC | CGT | 2 | 1 | 0.5 | 11573-11575 |
ORF1ab/nsp6 | 201 | F201R | F3770R | nonsyn | TTc | CGc | 2 | 1 | 0.5 | 11573-11575 |
ORF1ab/nsp6 | 201 | F201H | F3770H | nonsyn | TTC | CAT | 2 | 1 | 0.5 | 11573-11575 |
ORF1ab/nsp6 | 201 | F201H | F3770H | nonsyn | TTc | CAc | 2 | 1 | 0.5 | 11573-11575 |
ORF1ab/nsp6 | 201 | F201del1 | F3770del1 | del | Ttc | -tc | 1 | 1 | 1 | 11573-11575 |
ORF1ab/nsp6 | 201 | F201X | F3770X | nonsyn | tTC | tGA | 1 | 1 | 1 | 11573-11575 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 16770 | 16770 | All | 0.003207 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 10119 | 10119 | B.1.1.7 | 0.009059 |
ORF1ab/nsp6 | 201 | F201V | Ttc | Gtc | 1254 | 1254 | All | 0.00024 |
ORF1ab/nsp6 | 201 | F201V | Ttc | Gtc | 1233 | 1233 | B.1.526 | 0.028981 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1206 | 1206 | B.1.241 | 0.978896 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 573 | 573 | B.1.351 | 0.017033 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 382 | 382 | AY.4 | 0.000595 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 263 | 263 | B.1.567 | 0.876667 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 251 | 251 | AY.43 | 0.001112 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 245 | 245 | AY.25 | 0.001474 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 244 | 244 | B.1.1.519 | 0.009689 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 229 | 229 | B.1.404 | 0.298177 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 213 | 213 | B.1.177 | 0.002805 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 130 | 181 | All | 0.000025 |
ORF1ab/nsp6 | 201 | F201L | ttC | ttG | 33 | 181 | All | 0.000006 |
ORF1ab/nsp6 | 201 | F201L | ttC | ttA | 15 | 181 | All | 0.000003 |
ORF1ab/nsp6 | 201 | F201L | TtC | CtT | 3 | 181 | All | 0.000001 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 173 | 173 | B.1.243 | 0.012038 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 166 | 166 | B.1.2 | 0.001462 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 159 | 159 | B.1.617.2 | 0.000599 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 154 | 154 | B.1.526 | 0.00362 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 144 | 144 | P.1 | 0.002269 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 137 | 137 | B.1 | 0.001255 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 120 | 120 | AY.3 | 0.001194 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 119 | 119 | B.1.632 | 0.798658 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 105 | 105 | B.1.558 | 0.479452 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 95 | 95 | AY.3.1 | 0.0081 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 94 | 94 | AY.103 | 0.000584 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 92 | 92 | AY.9.2 | 0.003379 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 87 | 87 | AY.44 | 0.00053 |
ORF1ab/nsp6 | 201 | F201S | tTc | tCc | 79 | 79 | All | 0.000015 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 68 | 68 | B.1.258 | 0.004525 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 59 | 59 | AY.42 | 0.002374 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 58 | 58 | All | 0.000011 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 57 | 57 | B.1.265 | 0.072427 |
ORF1ab/nsp6 | 201 | F201C | tTc | tGc | 53 | 54 | All | 0.00001 |
ORF1ab/nsp6 | 201 | F201C | tTC | tGT | 1 | 54 | All | 0 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 47 | 47 | Q.8 | 0.007751 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 46 | 46 | B.1.160.16 | 0.042751 |
ORF1ab/nsp6 | 201 | F201C | tTc | tGc | 44 | 44 | AY.4 | 0.000068 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 44 | 44 | AY.61 | 0.00461 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 41 | 41 | B.1.1 | 0.000744 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 36 | 36 | B.1.429 | 0.000847 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 35 | 35 | AY.34 | 0.003394 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 29 | 29 | AY.98.1 | 0.001404 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 28 | 28 | AY.26 | 0.000793 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 28 | 28 | B.1.240 | 0.006036 |
ORF1ab/nsp6 | 201 | F201S | tTc | tCc | 27 | 27 | AY.47 | 0.00084 |
ORF1ab/nsp6 | 201 | F201L | ttC | ttG | 25 | 25 | AY.3 | 0.000249 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 25 | 25 | AY.39 | 0.000618 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 23 | 23 | B.1.160 | 0.000717 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 21 | 21 | B.1.596 | 0.00183 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 20 | 20 | AY.75.1 | 0.003606 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 20 | 20 | B.1.351.2 | 0.006051 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 18 | 18 | AY.20 | 0.0007 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 18 | 18 | AY.29 | 0.000284 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 18 | 18 | B.1.1.297 | 0.040268 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 18 | 18 | C.37 | 0.002089 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 17 | 17 | P.3 | 0.027113 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 16 | 16 | AY.5 | 0.00033 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 16 | 16 | B.1.1.7 | 0.000014 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 15 | 15 | AY.43 | 0.000066 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 15 | 15 | B | 0.001917 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 15 | 15 | B.1.1.301 | 0.017689 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 14 | 14 | AY.119 | 0.000494 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 14 | 14 | AY.4.2 | 0.000304 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 14 | 14 | B.1.1.170 | 0.017456 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 14 | 14 | B.1.1.28 | 0.004357 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 13 | 13 | AY.102 | 0.000345 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 13 | 13 | AY.12 | 0.004109 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 13 | 13 | B.1.221 | 0.000923 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 13 | 13 | B.1.595 | 0.003392 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 13 | 13 | R.1 | 0.00117 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 12 | 12 | AY.23 | 0.000837 |
ORF1ab/nsp6 | 201 | F201S | tTc | tCc | 12 | 12 | B.1.2 | 0.000106 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 11 | 11 | AY.54 | 0.001049 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 11 | 11 | AY.99.2 | 0.001014 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 10 | 10 | AY.120 | 0.000372 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 10 | 10 | AY.121 | 0.001353 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 10 | 10 | AY.13 | 0.00161 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 10 | 10 | AY.33 | 0.000668 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 10 | 10 | AY.98 | 0.00079 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 10 | 10 | B.1.1.316 | 0.009251 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 10 | 10 | B.1.36.19 | 0.092593 |
ORF1ab/nsp6 | 201 | F201I | Ttc | Atc | 9 | 9 | All | 0.000002 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 9 | 9 | AY.44 | 0.000055 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 9 | 9 | B.1.427 | 0.000454 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 9 | 9 | B.1.523 | 0.022059 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 9 | 9 | L.3 | 0.031915 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 8 | 8 | AY.25 | 0.000048 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 8 | 8 | AY.47 | 0.000249 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 8 | 8 | AY.91 | 0.005844 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 8 | 8 | B.1.1.214 | 0.000444 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 8 | 8 | B.1.623 | 0.004292 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 8 | 8 | B.1.637 | 0.000585 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 7 | 7 | A | 0.002709 |
ORF1ab/nsp6 | 201 | F201Y | tTc | tAc | 6 | 7 | All | 0.000001 |
ORF1ab/nsp6 | 201 | F201Y | tTC | tAT | 1 | 7 | All | 0 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 7 | 7 | AY.39.1 | 0.000277 |
ORF1ab/nsp6 | 201 | F201S | tTc | tCc | 7 | 7 | AY.44 | 0.000043 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 7 | 7 | AY.75 | 0.000392 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 7 | 7 | B.1.1.317 | 0.002882 |
ORF1ab/nsp6 | 201 | F201I | Ttc | Atc | 7 | 7 | B.1.1.7 | 0.000006 |
ORF1ab/nsp6 | 201 | F201S | tTc | tCc | 7 | 7 | B.1.1.7 | 0.000006 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 6 | 7 | B.1.1.7 | 0.000005 |
ORF1ab/nsp6 | 201 | F201L | ttC | ttA | 1 | 7 | B.1.1.7 | 0.000001 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 7 | 7 | B.1.258.17 | 0.000728 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 7 | 7 | B.1.524 | 0.009845 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 7 | 7 | B.1.621.1 | 0.003541 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 6 | 6 | 0.333333 | |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 6 | 6 | AY.114 | 0.001387 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 6 | 6 | AY.45 | 0.00073 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 6 | 6 | AY.9 | 0.000406 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 6 | 6 | AY.9.1 | 0.000502 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 6 | 6 | B.1.1.326 | 0.010563 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 6 | 6 | B.1.177 | 0.000079 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 6 | 6 | B.1.355 | 0.066667 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 6 | 6 | B.1.36 | 0.000875 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 6 | 6 | B.1.466.2 | 0.002347 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 6 | 6 | B.1.617.2 | 0.000023 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 6 | 6 | Q.4 | 0.002729 |
ORF1ab/nsp6 | 201 | F201L | TtC | CtT | 2 | 5 | 0.111111 | |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 2 | 5 | 0.111111 | |
ORF1ab/nsp6 | 201 | F201L | ttC | ttG | 1 | 5 | 0.055556 | |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 5 | 5 | AY.101 | 0.002452 |
ORF1ab/nsp6 | 201 | F201S | tTc | tCc | 5 | 5 | AY.103 | 0.000031 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 5 | 5 | AY.117 | 0.000423 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 5 | 5 | AY.4 | 0.000008 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 5 | 5 | AY.4.4 | 0.002046 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 5 | 5 | AY.6 | 0.000206 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 5 | 5 | AY.72 | 0.006803 |
ORF1ab/nsp6 | 201 | F201V | Ttc | Gtc | 5 | 5 | B.1 | 0.000046 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 5 | 5 | B.1.1.433 | 0.007123 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 5 | 5 | B.1.177.69 | 0.007418 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 4 | 5 | B.1.2 | 0.000035 |
ORF1ab/nsp6 | 201 | F201L | ttC | ttG | 1 | 5 | B.1.2 | 0.000009 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 5 | 5 | B.1.617.2 | 0.000019 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 5 | 5 | B.1.621 | 0.000443 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 5 | 5 | P.1.10 | 0.001347 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 5 | 5 | P.1.14 | 0.000239 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 4 | 4 | AY.100 | 0.000184 |
ORF1ab/nsp6 | 201 | F201L | ttC | ttA | 4 | 4 | AY.110 | 0.000451 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 4 | 4 | AY.118 | 0.000251 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 4 | 4 | AY.30 | 0.001583 |
ORF1ab/nsp6 | 201 | F201C | tTc | tGc | 4 | 4 | AY.44 | 0.000024 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 4 | 4 | AY.46.4 | 0.000658 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 4 | 4 | AY.5 | 0.000083 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 4 | 4 | AY.75.1 | 0.000721 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 4 | 4 | B.1 | 0.000037 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 4 | 4 | B.1.1.216 | 0.003562 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 4 | 4 | B.1.1.222 | 0.000816 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 4 | 4 | B.1.1.33 | 0.001684 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 4 | 4 | B.1.1.33 | 0.001684 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 4 | 4 | B.1.1.434 | 0.001394 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 4 | 4 | B.1.143 | 0.085106 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 4 | 4 | B.1.400 | 0.001716 |
ORF1ab/nsp6 | 201 | F201V | Ttc | Gtc | 4 | 4 | B.1.617.2 | 0.000015 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 3 | 3 | A.2 | 0.001985 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 3 | 3 | AY.1 | 0.001187 |
ORF1ab/nsp6 | 201 | F201L | ttC | ttG | 2 | 3 | AY.103 | 0.000012 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 1 | 3 | AY.103 | 0.000006 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 3 | 3 | AY.105 | 0.001929 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 3 | 3 | AY.113 | 0.000427 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 3 | 3 | AY.116 | 0.00086 |
ORF1ab/nsp6 | 201 | F201S | tTc | tCc | 3 | 3 | AY.116.1 | 0.000934 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 3 | 3 | AY.19 | 0.003421 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 3 | 3 | AY.23.1 | 0.001252 |
ORF1ab/nsp6 | 201 | F201Y | tTc | tAc | 3 | 3 | AY.39 | 0.000074 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 3 | 3 | AY.43 | 0.000013 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 3 | 3 | AY.62 | 0.001307 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 3 | 3 | AY.74 | 0.000347 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 3 | 3 | B.1.1.174 | 0.010135 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 3 | 3 | B.1.1.207 | 0.003546 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 3 | 3 | B.1.1.306 | 0.001315 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 3 | 3 | B.1.177.65 | 0.001996 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 3 | 3 | B.1.177.81 | 0.000568 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 3 | 3 | B.1.375 | 0.002459 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 3 | 3 | B.1.426 | 0.003027 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 3 | 3 | B.1.575 | 0.00091 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 3 | 3 | B.1.617.1 | 0.000387 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 3 | 3 | P.1.15 | 0.000697 |
ORF1ab/nsp6 | 201 | F201A | TTc | GCc | 2 | 2 | 0.111111 | |
ORF1ab/nsp6 | 201 | F201R | TTc | CGc | 1 | 2 | 0.055556 | |
ORF1ab/nsp6 | 201 | F201Y | tTC | tAT | 1 | 2 | 0.055556 | |
ORF1ab/nsp6 | 201 | F201R | TTC | CGT | 1 | 2 | 0.055556 | |
ORF1ab/nsp6 | 201 | F201H | TTc | CAc | 1 | 2 | 0.055556 | |
ORF1ab/nsp6 | 201 | F201Y | tTc | tAc | 1 | 2 | 0.055556 | |
ORF1ab/nsp6 | 201 | F201C | tTC | tGT | 1 | 2 | 0.055556 | |
ORF1ab/nsp6 | 201 | F201C | tTc | tGc | 1 | 2 | 0.055556 | |
ORF1ab/nsp6 | 201 | F201H | TTC | CAT | 1 | 2 | 0.055556 | |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 2 | 2 | A | 0.000774 |
ORF1ab/nsp6 | 201 | F201A | TTc | GCc | 2 | 2 | All | 0 |
ORF1ab/nsp6 | 201 | F201H | TTc | CAc | 1 | 2 | All | 0 |
ORF1ab/nsp6 | 201 | F201H | TTC | CAT | 1 | 2 | All | 0 |
ORF1ab/nsp6 | 201 | F201R | TTC | CGT | 1 | 2 | All | 0 |
ORF1ab/nsp6 | 201 | F201R | TTc | CGc | 1 | 2 | All | 0 |
ORF1ab/nsp6 | 201 | F201L | ttC | ttA | 2 | 2 | AY.26 | 0.000057 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 2 | 2 | AY.3 | 0.00002 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 2 | 2 | AY.38 | 0.000999 |
ORF1ab/nsp6 | 201 | F201S | tTc | tCc | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 2 | 2 | AY.4.5 | 0.000215 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 2 | 2 | AY.4.5 | 0.000215 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 2 | 2 | AY.40 | 0.001929 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 2 | 2 | AY.46 | 0.000208 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 2 | 2 | AY.65 | 0.001066 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 2 | 2 | AY.65 | 0.001066 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 2 | 2 | AY.69 | 0.000373 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 2 | 2 | AY.75 | 0.000112 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 1 | 2 | AY.75 | 0.000056 |
ORF1ab/nsp6 | 201 | F201L | ttC | ttA | 1 | 2 | AY.75 | 0.000056 |
ORF1ab/nsp6 | 201 | F201L | ttC | ttA | 2 | 2 | AY.90 | 0.001369 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 2 | 2 | AY.93 | 0.000546 |
ORF1ab/nsp6 | 201 | F201L | ttC | ttA | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 2 | 2 | B.1.1.176 | 0.000879 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 2 | 2 | B.1.1.25 | 0.001137 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 2 | 2 | B.1.1.348 | 0.001592 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 2 | 2 | B.1.1.37 | 0.000386 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 2 | 2 | B.1.1.4 | 0.005952 |
ORF1ab/nsp6 | 201 | F201V | Ttc | Gtc | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 2 | 2 | B.1.146 | 0.008475 |
ORF1ab/nsp6 | 201 | F201L | TtC | CtT | 1 | 2 | B.1.221 | 0.000071 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 1 | 2 | B.1.221 | 0.000071 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 2 | 2 | B.1.234 | 0.000264 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 2 | 2 | B.1.315 | 0.012121 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 2 | 2 | B.1.349 | 0.00143 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 2 | 2 | B.1.36.1 | 0.002281 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 2 | 2 | B.1.36.29 | 0.001035 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 2 | 2 | B.1.416 | 0.002538 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 2 | 2 | B.1.511 | 0.068966 |
ORF1ab/nsp6 | 201 | F201C | tTc | tGc | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp6 | 201 | F201S | tTc | tCc | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 2 | 2 | B.1.619 | 0.001742 |
ORF1ab/nsp6 | 201 | F201V | Ttc | Gtc | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp6 | 201 | F201S | tTc | tCc | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 2 | 2 | P.1.17 | 0.000324 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 2 | 2 | P.1.2 | 0.002312 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 2 | 2 | Q.1 | 0.000253 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | A.2.5.2 | 0.001572 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | AE.2 | 0.058824 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | AE.5 | 0.018519 |
ORF1ab/nsp6 | 201 | F201del1 | Ttc | -tc | 1 | 1 | All | 0 |
ORF1ab/nsp6 | 201 | F201X | tTC | tGA | 1 | 1 | All | 0 |
ORF1ab/nsp6 | 201 | F201Y | tTc | tAc | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | AY.107 | 0.000466 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp6 | 201 | F201L | ttC | ttG | 1 | 1 | AY.117 | 0.000085 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | AY.21 | 0.001898 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp6 | 201 | F201I | Ttc | Atc | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp6 | 201 | F201V | Ttc | Gtc | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp6 | 201 | F201S | tTc | tCc | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp6 | 201 | F201Y | tTc | tAc | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp6 | 201 | F201S | tTc | tCc | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp6 | 201 | F201V | Ttc | Gtc | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | AY.46.5 | 0.000198 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp6 | 201 | F201C | tTc | tGc | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp6 | 201 | F201X | tTC | tGA | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp6 | 201 | F201S | tTc | tCc | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 1 | 1 | AY.78 | 0.001541 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | AY.86 | 0.00083 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | AY.87 | 0.000833 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | AY.90 | 0.000684 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 1 | 1 | AY.99.2 | 0.000092 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | AZ.4 | 0.003356 |
ORF1ab/nsp6 | 201 | F201L | ttC | ttA | 1 | 1 | B | 0.000128 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 1 | 1 | B | 0.000128 |
ORF1ab/nsp6 | 201 | F201S | tTc | tCc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp6 | 201 | F201del1 | Ttc | -tc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.1.117 | 0.009709 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.1.161 | 0.003534 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.1.164 | 0.005155 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.1.231 | 0.003096 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.1.253 | 0.002506 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 1 | 1 | B.1.1.258 | 0.003257 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.1.263 | 0.001558 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.1.266 | 0.012195 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.1.280 | 0.003086 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.1.289 | 0.002083 |
ORF1ab/nsp6 | 201 | F201L | ttC | ttA | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.1.307 | 0.002532 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.1.311 | 0.000358 |
ORF1ab/nsp6 | 201 | F201V | Ttc | Gtc | 1 | 1 | B.1.1.312 | 0.001912 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.1.312 | 0.001912 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp6 | 201 | F201V | Ttc | Gtc | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.1.397 | 0.002252 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.1.416 | 0.000905 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.1.420 | 0.001006 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.1.464 | 0.001473 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.1.515 | 0.02 |
ORF1ab/nsp6 | 201 | F201S | tTc | tCc | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp6 | 201 | F201L | ttC | ttG | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.1.63 | 0.000386 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.1.89 | 0.006061 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.139 | 0.000733 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.157 | 0.002985 |
ORF1ab/nsp6 | 201 | F201V | Ttc | Gtc | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 1 | 1 | B.1.161 | 0.017241 |
ORF1ab/nsp6 | 201 | F201S | tTc | tCc | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.177.12 | 0.000152 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 1 | 1 | B.1.177.15 | 0.000631 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.177.31 | 0.011494 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 1 | 1 | B.1.177.5 | 0.001242 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.177.62 | 0.001192 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.177.68 | 0.015152 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 1 | 1 | B.1.177.76 | 0.002494 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 1 | 1 | B.1.177.83 | 0.001481 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 1 | 1 | B.1.177.9 | 0.001332 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp6 | 201 | F201V | Ttc | Gtc | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp6 | 201 | F201C | tTc | tGc | 1 | 1 | B.1.222 | 0.001692 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.222 | 0.001692 |
ORF1ab/nsp6 | 201 | F201V | Ttc | Gtc | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.324 | 0.001605 |
ORF1ab/nsp6 | 201 | F201S | tTc | tCc | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp6 | 201 | F201L | ttC | ttG | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp6 | 201 | F201S | tTc | tCc | 1 | 1 | B.1.36.31 | 0.001751 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.361 | 0.001289 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 1 | 1 | B.1.416 | 0.001269 |
ORF1ab/nsp6 | 201 | F201S | tTc | tCc | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp6 | 201 | F201V | Ttc | Gtc | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 1 | 1 | B.1.456 | 0.003268 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.470 | 0.001404 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.548 | 0.035714 |
ORF1ab/nsp6 | 201 | F201S | tTc | tCc | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.565 | 0.00081 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.573 | 0.006098 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.581 | 0.009434 |
ORF1ab/nsp6 | 201 | F201I | Ttc | Atc | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp6 | 201 | F201L | Ttc | Ctc | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.602 | 0.006536 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp6 | 201 | F201S | tTc | tCc | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.619.1 | 0.000641 |
ORF1ab/nsp6 | 201 | F201S | tTc | tCc | 1 | 1 | B.1.619.1 | 0.000641 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp6 | 201 | F201L | ttC | ttG | 1 | 1 | B.1.93 | 0.000934 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.20 | 0.023256 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.26 | 0.014706 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | B.4 | 0.002208 |
ORF1ab/nsp6 | 201 | F201L | ttC | ttA | 1 | 1 | B.6 | 0.00091 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | C.23 | 0.005814 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 1 | 1 | C.30 | 0.001727 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 1 | 1 | N.4 | 0.004255 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | P.1.16 | 0.000374 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | P.6 | 0.003145 |
ORF1ab/nsp6 | 201 | F201del | TTC | --- | 1 | 1 | Q.2 | 0.000613 |
ORF1ab/nsp6 | 201 | F201F | ttC | ttT | 1 | 1 | W.3 | 0.005263 |
![]() |
![]() |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
|