CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : CodonNum = 200 & Codon = Ctc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp6200F200LF3769LnonsynTtcCtc2421080.44628111570-11572

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp6200F200LTtcCtc108242All0.000021
ORF1ab/nsp6200F200LTtcCtc5555AY.30.000547
ORF1ab/nsp6200F200LTtcCtc532AY.40.000008
ORF1ab/nsp6200F200LTtcCtc831B.1.1.70.000007
ORF1ab/nsp6200F200LTtcCtc1414AY.200.000544
ORF1ab/nsp6200F200LTtcCtc88AY.460.000833
ORF1ab/nsp6200F200LTtcCtc27B.1.617.20.000008
ORF1ab/nsp6200F200LTtcCtc26AY.250.000012
ORF1ab/nsp6200F200LTtcCtc13AY.580.000907
ORF1ab/nsp6200F200LTtcCtc13B.10.000009
ORF1ab/nsp6200F200LTtcCtc12AY.230.00007
ORF1ab/nsp6200F200LTtcCtc12AY.50.000021
ORF1ab/nsp6200F200LTtcCtc12AY.610.000105
ORF1ab/nsp6200F200LTtcCtc12B.1.10.000018
ORF1ab/nsp6200F200LTtcCtc11AY.1030.000006
ORF1ab/nsp6200F200LTtcCtc11AY.1130.000142
ORF1ab/nsp6200F200LTtcCtc11AY.290.000016
ORF1ab/nsp6200F200LTtcCtc11AY.430.000004
ORF1ab/nsp6200F200LTtcCtc11B.1.1.330.000421
ORF1ab/nsp6200F200LTtcCtc11B.1.1.410.006329
ORF1ab/nsp6200F200LTtcCtc11B.1.1.570.011494
ORF1ab/nsp6200F200LTtcCtc11B.1.4270.00005