CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : CodonNum = 175

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp6175Y175YY3744YsyntaCtaT4128641286111495-11497
ORF1ab/nsp6175Y175delY3744deldelTAC---4444111495-11497
ORF1ab/nsp6175Y175CY3744CnonsyntActGc2727111495-11497
ORF1ab/nsp6175Y175HY3744HnonsynTacCac14120.85714311495-11497
ORF1ab/nsp6175Y175HY3744HnonsynTaCCaT1420.14285711495-11497
ORF1ab/nsp6175Y175NY3744NnonsynTacAac55111495-11497
ORF1ab/nsp6175Y175XY3744XnonsyntaCtaA55111495-11497
ORF1ab/nsp6175Y175FY3744FnonsyntActTc430.7511495-11497
ORF1ab/nsp6175Y175FY3744FnonsyntACtTT410.2511495-11497
ORF1ab/nsp6175Y175RY3744RnonsynTACCGT22111495-11497
ORF1ab/nsp6175Y175DY3744DnonsynTacGac22111495-11497
ORF1ab/nsp6175Y175LY3744LnonsynTAcCTc11111495-11497
ORF1ab/nsp6175Y175QY3744QnonsynTaCCaA11111495-11497
ORF1ab/nsp6175Y175SY3744SnonsyntActCc11111495-11497
ORF1ab/nsp6175Y175KY3744KnonsynTaCAaA11111495-11497
ORF1ab/nsp6175Y175EY3744EnonsynTaCGaA11111495-11497

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp6175Y175YtaCtaT4128641286All0.007896
ORF1ab/nsp6175Y175YtaCtaT3018330183B.1.1600.941336
ORF1ab/nsp6175Y175YtaCtaT27362736B.1.1.70.002449
ORF1ab/nsp6175Y175YtaCtaT10501050B.1.160.160.975836
ORF1ab/nsp6175Y175YtaCtaT771771B.1.160.80.993557
ORF1ab/nsp6175Y175YtaCtaT588588B.1.160.171
ORF1ab/nsp6175Y175YtaCtaT481481B.1.160.71
ORF1ab/nsp6175Y175YtaCtaT468468B.1.160.140.991525
ORF1ab/nsp6175Y175YtaCtaT412412B.1.160.260.997579
ORF1ab/nsp6175Y175YtaCtaT334334B.1.160.280.976608
ORF1ab/nsp6175Y175YtaCtaT250250B.10.00229
ORF1ab/nsp6175Y175YtaCtaT236236B.1.160.290.995781
ORF1ab/nsp6175Y175YtaCtaT226226B.1.160.241
ORF1ab/nsp6175Y175YtaCtaT225225B.1.160.330.995575
ORF1ab/nsp6175Y175YtaCtaT207207B.1.160.231
ORF1ab/nsp6175Y175YtaCtaT203203B.1.160.300.604167
ORF1ab/nsp6175Y175YtaCtaT200200B.1.160.150.990099
ORF1ab/nsp6175Y175YtaCtaT188188B.1.160.320.806867
ORF1ab/nsp6175Y175YtaCtaT172172B.1.160.110.982857
ORF1ab/nsp6175Y175YtaCtaT154154B.1.160.120.987179
ORF1ab/nsp6175Y175YtaCtaT146146B.1.160.220.986486
ORF1ab/nsp6175Y175YtaCtaT137137B.1.160.181
ORF1ab/nsp6175Y175YtaCtaT136136B.1.160.90.978417
ORF1ab/nsp6175Y175YtaCtaT122122AB.11
ORF1ab/nsp6175Y175YtaCtaT122122B.1.160.310.983871
ORF1ab/nsp6175Y175YtaCtaT118118B.1.160.100.951613
ORF1ab/nsp6175Y175YtaCtaT9090B.1.160.251
ORF1ab/nsp6175Y175YtaCtaT8383AY.390.002051
ORF1ab/nsp6175Y175YtaCtaT8282B.1.160.200.732143
ORF1ab/nsp6175Y175YtaCtaT7676B.1.1770.001001
ORF1ab/nsp6175Y175YtaCtaT7373B.1.10.001324
ORF1ab/nsp6175Y175YtaCtaT6666B.1.160.271
ORF1ab/nsp6175Y175YtaCtaT5757B.1.2210.004049
ORF1ab/nsp6175Y175YtaCtaT5252AY.440.000317
ORF1ab/nsp6175Y175YtaCtaT4949B.1.160.211
ORF1ab/nsp6175Y175delTAC---4444All0.000008
ORF1ab/nsp6175Y175YtaCtaT4141B.1.617.20.000154
ORF1ab/nsp6175Y175YtaCtaT3939AY.40.000061
ORF1ab/nsp6175Y175YtaCtaT3636B.1.160.131
ORF1ab/nsp6175Y175YtaCtaT3434B.1.177.440.017644
ORF1ab/nsp6175Y175YtaCtaT2828B.1.1.390.014271
ORF1ab/nsp6175Y175YtaCtaT2828B.1.160.191
ORF1ab/nsp6175Y175CtActGc2727All0.000005
ORF1ab/nsp6175Y175YtaCtaT2727B.1.1.4451
ORF1ab/nsp6175Y175YtaCtaT2626B.1.5650.02107
ORF1ab/nsp6175Y175YtaCtaT2323B.1.2600.076923
ORF1ab/nsp6175Y175YtaCtaT2323B.1.6210.002036
ORF1ab/nsp6175Y175YtaCtaT2121B.1.258.110.008323
ORF1ab/nsp6175Y175YtaCtaT1818P.10.000284
ORF1ab/nsp6175Y175YtaCtaT1616AY.840.006999
ORF1ab/nsp6175Y175YtaCtaT1616B0.002045
ORF1ab/nsp6175Y175YtaCtaT1515AY.1050.009646
ORF1ab/nsp6175Y175YtaCtaT1515AY.250.00009
ORF1ab/nsp6175Y175HTacCac1214All0.000002
ORF1ab/nsp6175Y175HTaCCaT214All0
ORF1ab/nsp6175Y175YtaCtaT1414AY.430.000062
ORF1ab/nsp6175Y175YtaCtaT1414B.1.177.730.007928
ORF1ab/nsp6175Y175YtaCtaT1414Q.10.001769
ORF1ab/nsp6175Y175YtaCtaT1313B.1.3960.009174
ORF1ab/nsp6175Y175YtaCtaT1111AY.46.60.000794
ORF1ab/nsp6175Y175YtaCtaT1111B.1.177.430.016248
ORF1ab/nsp6175Y175YtaCtaT1111B.1.177.90.014647
ORF1ab/nsp6175Y175YtaCtaT1111B.1.3110.00302
ORF1ab/nsp6175Y175delTAC---99B.1.1.70.000008
ORF1ab/nsp6175Y175YtaCtaT99B.1.20.000079
ORF1ab/nsp6175Y175YtaCtaT88AY.1030.00005
ORF1ab/nsp6175Y175YtaCtaT88AY.140.000704
ORF1ab/nsp6175Y175YtaCtaT88AY.30.00008
ORF1ab/nsp6175Y175YtaCtaT88B.1.4730.153846
ORF1ab/nsp6175Y175YtaCtaT77AY.1180.000439
ORF1ab/nsp6175Y175YtaCtaT77AY.920.002011
ORF1ab/nsp6175Y175YtaCtaT77B.1.4290.000165
ORF1ab/nsp6175Y175delTAC---77B.1.617.20.000026
ORF1ab/nsp6175Y175YtaCtaT66AY.1020.000159
ORF1ab/nsp6175Y175YtaCtaT66AY.420.000241
ORF1ab/nsp6175Y175YtaCtaT66B.1.5090.005195
ORF1ab/nsp6175Y175NTacAac55All0.000001
ORF1ab/nsp6175Y175XtaCtaA55All0.000001
ORF1ab/nsp6175Y175CtActGc55B.10.000046
ORF1ab/nsp6175Y175YtaCtaT55B.1.1.700.001705
ORF1ab/nsp6175Y175YtaCtaT55B.1.2580.000333
ORF1ab/nsp6175Y175YtaCtaT55B.1.360.00073
ORF1ab/nsp6175Y175YtaCtaT55B.1.5610.001985
ORF1ab/nsp6175Y175YtaCtaT55B.230.01462
ORF1ab/nsp6175Y175FtActTc34All0.000001
ORF1ab/nsp6175Y175FtACtTT14All0
ORF1ab/nsp6175Y175YtaCtaT44AY.99.20.000369
ORF1ab/nsp6175Y175YtaCtaT44B.1.1.280.001245
ORF1ab/nsp6175Y175CtActGc44B.1.1.70.000004
ORF1ab/nsp6175Y175YtaCtaT44B.1.177.310.045977
ORF1ab/nsp6175Y175YtaCtaT44B.1.177.810.000757
ORF1ab/nsp6175Y175YtaCtaT44B.1.2430.000278
ORF1ab/nsp6175Y175YtaCtaT44B.1.4650.015209
ORF1ab/nsp6175Y175YtaCtaT33AY.1060.001005
ORF1ab/nsp6175Y175YtaCtaT33AY.360.000445
ORF1ab/nsp6175Y175NTacAac33AY.40.000005
ORF1ab/nsp6175Y175CtActGc33AY.99.20.000276
ORF1ab/nsp6175Y175YtaCtaT33B.1.1.250.001706
ORF1ab/nsp6175Y175YtaCtaT33B.1.1.260.015707
ORF1ab/nsp6175Y175YtaCtaT33B.1.3510.000089
ORF1ab/nsp6175Y175YtaCtaT33B.1.36.10.003421
ORF1ab/nsp6175Y175YtaCtaT33B.1.36.290.001552
ORF1ab/nsp6175Y175YtaCtaT33B.1.4700.004213
ORF1ab/nsp6175Y175YtaCtaT33B.1.5330.028846
ORF1ab/nsp6175Y175YtaCtaT33B.1.5640.001278
ORF1ab/nsp6175Y175YtaCtaT33B.1.5750.00091
ORF1ab/nsp6175Y175YtaCtaT33P.20.00056
ORF1ab/nsp6175Y175YtaCtaT33Q.80.000495
ORF1ab/nsp6175Y175RTACCGT220.111111
ORF1ab/nsp6175Y175YtaCtaT220.111111
ORF1ab/nsp6175Y175DTacGac22All0
ORF1ab/nsp6175Y175RTACCGT22All0
ORF1ab/nsp6175Y175YtaCtaT22AY.1100.000225
ORF1ab/nsp6175Y175YtaCtaT22AY.1190.000071
ORF1ab/nsp6175Y175YtaCtaT22AY.200.000078
ORF1ab/nsp6175Y175delTAC---22AY.40.000003
ORF1ab/nsp6175Y175YtaCtaT22AY.4.20.000043
ORF1ab/nsp6175Y175delTAC---22AY.430.000009
ORF1ab/nsp6175Y175YtaCtaT22AZ.40.006711
ORF1ab/nsp6175Y175HTacCac22B.10.000018
ORF1ab/nsp6175Y175delTAC---22B.10.000018
ORF1ab/nsp6175Y175CtActGc22B.1.10.000036
ORF1ab/nsp6175Y175YtaCtaT22B.1.1.2840.000215
ORF1ab/nsp6175Y175YtaCtaT22B.1.1.370.000386
ORF1ab/nsp6175Y175YtaCtaT22B.1.1.5190.000079
ORF1ab/nsp6175Y175HTacCac22B.1.1.70.000002
ORF1ab/nsp6175Y175YtaCtaT22B.1.177.860.000367
ORF1ab/nsp6175Y175YtaCtaT22B.1.2220.003384
ORF1ab/nsp6175Y175YtaCtaT22B.1.2360.004107
ORF1ab/nsp6175Y175YtaCtaT22B.1.36.350.005208
ORF1ab/nsp6175Y175YtaCtaT22B.1.36.80.002
ORF1ab/nsp6175Y175YtaCtaT22B.1.3750.001639
ORF1ab/nsp6175Y175YtaCtaT22B.1.4090.001563
ORF1ab/nsp6175Y175YtaCtaT22B.1.4680.011429
ORF1ab/nsp6175Y175YtaCtaT22B.1.5230.004902
ORF1ab/nsp6175Y175YtaCtaT22B.1.5600.009259
ORF1ab/nsp6175Y175YtaCtaT22B.1.5770.001375
ORF1ab/nsp6175Y175YtaCtaT22B.1.6090.000959
ORF1ab/nsp6175Y175YtaCtaT22C.350.001548
ORF1ab/nsp6175Y175YtaCtaT22D.20.00015
ORF1ab/nsp6175Y175YtaCtaT22N.50.003534
ORF1ab/nsp6175Y175YtaCtaT11A0.000387
ORF1ab/nsp6175Y175delTAC---11A0.000387
ORF1ab/nsp6175Y175YtaCtaT11A.20.000662
ORF1ab/nsp6175Y175YtaCtaT11AF.10.037037
ORF1ab/nsp6175Y175StActCc11All0
ORF1ab/nsp6175Y175ETaCGaA11All0
ORF1ab/nsp6175Y175LTAcCTc11All0
ORF1ab/nsp6175Y175KTaCAaA11All0
ORF1ab/nsp6175Y175QTaCCaA11All0
ORF1ab/nsp6175Y175YtaCtaT11AP.10.001502
ORF1ab/nsp6175Y175YtaCtaT11AY.1000.000046
ORF1ab/nsp6175Y175CtActGc11AY.1010.00049
ORF1ab/nsp6175Y175delTAC---11AY.1200.000037
ORF1ab/nsp6175Y175YtaCtaT11AY.160.00038
ORF1ab/nsp6175Y175YtaCtaT11AY.16.10.00047
ORF1ab/nsp6175Y175YtaCtaT11AY.230.00007
ORF1ab/nsp6175Y175NTacAac11AY.250.000006
ORF1ab/nsp6175Y175delTAC---11AY.250.000006
ORF1ab/nsp6175Y175YtaCtaT11AY.3.10.000085
ORF1ab/nsp6175Y175YtaCtaT11AY.300.000396
ORF1ab/nsp6175Y175YtaCtaT11AY.340.000097
ORF1ab/nsp6175Y175YtaCtaT11AY.350.000233
ORF1ab/nsp6175Y175delTAC---11AY.390.000025
ORF1ab/nsp6175Y175delTAC---11AY.39.10.00004
ORF1ab/nsp6175Y175XtaCtaA11AY.4.20.000022
ORF1ab/nsp6175Y175delTAC---11AY.420.00004
ORF1ab/nsp6175Y175CtActGc11AY.430.000004
ORF1ab/nsp6175Y175LTAcCTc11AY.430.000004
ORF1ab/nsp6175Y175HTacCac11AY.440.000006
ORF1ab/nsp6175Y175StActCc11AY.440.000006
ORF1ab/nsp6175Y175delTAC---11AY.440.000006
ORF1ab/nsp6175Y175YtaCtaT11AY.460.000104
ORF1ab/nsp6175Y175CtActGc11AY.50.000021
ORF1ab/nsp6175Y175YtaCtaT11AY.50.000021
ORF1ab/nsp6175Y175YtaCtaT11AY.540.000095
ORF1ab/nsp6175Y175CtActGc11AY.610.000105
ORF1ab/nsp6175Y175YtaCtaT11AY.610.000105
ORF1ab/nsp6175Y175delTAC---11AY.620.000436
ORF1ab/nsp6175Y175delTAC---11AY.650.000533
ORF1ab/nsp6175Y175YtaCtaT11AY.670.000464
ORF1ab/nsp6175Y175YtaCtaT11AY.70.000196
ORF1ab/nsp6175Y175delTAC---11AY.750.000056
ORF1ab/nsp6175Y175delTAC---11AY.780.001541
ORF1ab/nsp6175Y175FtActTc11AY.840.000437
ORF1ab/nsp6175Y175NTacAac11AY.9.20.000037
ORF1ab/nsp6175Y175CtActGc11AY.930.000273
ORF1ab/nsp6175Y175CtActGc11AY.98.10.000048
ORF1ab/nsp6175Y175YtaCtaT11AY.990.001049
ORF1ab/nsp6175Y175KTaCAaA11AY.990.001049
ORF1ab/nsp6175Y175CtActGc11AY.99.10.001553
ORF1ab/nsp6175Y175FtActTc11B.10.000009
ORF1ab/nsp6175Y175DTacGac11B.10.000009
ORF1ab/nsp6175Y175XtaCtaA11B.10.000009
ORF1ab/nsp6175Y175HTacCac11B.1.10.000018
ORF1ab/nsp6175Y175delTAC---11B.1.10.000018
ORF1ab/nsp6175Y175QTaCCaA11B.1.10.000018
ORF1ab/nsp6175Y175HTaCCaT11B.1.1.1390.022727
ORF1ab/nsp6175Y175YtaCtaT11B.1.1.1530.001095
ORF1ab/nsp6175Y175YtaCtaT11B.1.1.1610.003534
ORF1ab/nsp6175Y175YtaCtaT11B.1.1.1700.001247
ORF1ab/nsp6175Y175delTAC---11B.1.1.1920.002309
ORF1ab/nsp6175Y175HTacCac11B.1.1.2190.005
ORF1ab/nsp6175Y175YtaCtaT11B.1.1.2360.006897
ORF1ab/nsp6175Y175YtaCtaT11B.1.1.2610.008621
ORF1ab/nsp6175Y175YtaCtaT11B.1.1.2690.001353
ORF1ab/nsp6175Y175YtaCtaT11B.1.1.2770.000759
ORF1ab/nsp6175Y175CtActGc11B.1.1.280.000311
ORF1ab/nsp6175Y175YtaCtaT11B.1.1.2860.002899
ORF1ab/nsp6175Y175CtActGc11B.1.1.3060.000438
ORF1ab/nsp6175Y175YtaCtaT11B.1.1.3160.000925
ORF1ab/nsp6175Y175YtaCtaT11B.1.1.3710.010417
ORF1ab/nsp6175Y175HTacCac11B.1.1.3840.02381
ORF1ab/nsp6175Y175YtaCtaT11B.1.1.4070.041667
ORF1ab/nsp6175Y175delTAC---11B.1.1.4090.002833
ORF1ab/nsp6175Y175XtaCtaA11B.1.1.4110.014706
ORF1ab/nsp6175Y175ETaCGaA11B.1.1.4110.014706
ORF1ab/nsp6175Y175DTacGac11B.1.1.4110.014706
ORF1ab/nsp6175Y175CtActGc11B.1.1.4640.001473
ORF1ab/nsp6175Y175YtaCtaT11B.1.1.470.005348
ORF1ab/nsp6175Y175YtaCtaT11B.1.1.500.000679
ORF1ab/nsp6175Y175FtACtTT11B.1.1.70.000001
ORF1ab/nsp6175Y175YtaCtaT11B.1.1240.007812
ORF1ab/nsp6175Y175YtaCtaT11B.1.1390.000733
ORF1ab/nsp6175Y175YtaCtaT11B.1.1570.002985
ORF1ab/nsp6175Y175CtActGc11B.1.1660.008475
ORF1ab/nsp6175Y175HTaCCaT11B.1.1700.00431
ORF1ab/nsp6175Y175YtaCtaT11B.1.177.120.000152
ORF1ab/nsp6175Y175YtaCtaT11B.1.177.180.00116
ORF1ab/nsp6175Y175YtaCtaT11B.1.177.230.003236
ORF1ab/nsp6175Y175YtaCtaT11B.1.177.40.000211
ORF1ab/nsp6175Y175YtaCtaT11B.1.177.600.000218
ORF1ab/nsp6175Y175XtaCtaA11B.1.177.690.001484
ORF1ab/nsp6175Y175YtaCtaT11B.1.177.750.001041
ORF1ab/nsp6175Y175YtaCtaT11B.1.177.80.000752
ORF1ab/nsp6175Y175delTAC---11B.1.177.830.001481
ORF1ab/nsp6175Y175CtActGc11B.1.20.000009
ORF1ab/nsp6175Y175HTacCac11B.1.20.000009
ORF1ab/nsp6175Y175YtaCtaT11B.1.2100.002132
ORF1ab/nsp6175Y175XtaCtaA11B.1.2210.000071
ORF1ab/nsp6175Y175YtaCtaT11B.1.2370.004975
ORF1ab/nsp6175Y175YtaCtaT11B.1.2400.000216
ORF1ab/nsp6175Y175YtaCtaT11B.1.2680.010417
ORF1ab/nsp6175Y175YtaCtaT11B.1.3260.007576
ORF1ab/nsp6175Y175YtaCtaT11B.1.3360.002439
ORF1ab/nsp6175Y175YtaCtaT11B.1.351.30.000876
ORF1ab/nsp6175Y175YtaCtaT11B.1.3780.006849
ORF1ab/nsp6175Y175YtaCtaT11B.1.4080.00369
ORF1ab/nsp6175Y175YtaCtaT11B.1.416.10.001563
ORF1ab/nsp6175Y175YtaCtaT11B.1.4230.010204
ORF1ab/nsp6175Y175YtaCtaT11B.1.4280.00102
ORF1ab/nsp6175Y175YtaCtaT11B.1.4380.006536
ORF1ab/nsp6175Y175YtaCtaT11B.1.438.10.000107
ORF1ab/nsp6175Y175YtaCtaT11B.1.4600.017857
ORF1ab/nsp6175Y175YtaCtaT11B.1.4620.007246
ORF1ab/nsp6175Y175YtaCtaT11B.1.5250.000113
ORF1ab/nsp6175Y175delTAC---11B.1.5250.000113
ORF1ab/nsp6175Y175YtaCtaT11B.1.5670.003333
ORF1ab/nsp6175Y175YtaCtaT11B.1.5800.004065
ORF1ab/nsp6175Y175YtaCtaT11B.1.5960.000087
ORF1ab/nsp6175Y175YtaCtaT11B.1.6000.005848
ORF1ab/nsp6175Y175HTacCac11B.1.617.20.000004
ORF1ab/nsp6175Y175delTAC---11B.1.6300.005236
ORF1ab/nsp6175Y175YtaCtaT11C.200.076923
ORF1ab/nsp6175Y175delTAC---11C.360.000911
ORF1ab/nsp6175Y175delTAC---11C.370.000116
ORF1ab/nsp6175Y175YtaCtaT11C.400.027778
ORF1ab/nsp6175Y175FtActTc11D.20.000075
ORF1ab/nsp6175Y175YtaCtaT11L.30.003546
ORF1ab/nsp6175Y175delTAC---11N.40.004255
ORF1ab/nsp6175Y175YtaCtaT11P.1.10.000318
ORF1ab/nsp6175Y175CtActGc11P.1.120.000484
ORF1ab/nsp6175Y175YtaCtaT11P.1.130.000898
ORF1ab/nsp6175Y175YtaCtaT11P.1.90.004808
ORF1ab/nsp6175Y175YtaCtaT11P.30.001595
ORF1ab/nsp6175Y175HTacCac11Q.10.000126
ORF1ab/nsp6175Y175delTAC---11Q.20.000613
ORF1ab/nsp6175Y175YtaCtaT11Q.20.000613
ORF1ab/nsp6175Y175HTacCac11Q.30.000145
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