CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : CodonNum = 162 & Codon = atC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp6162I162II3731IsynatTatC1761470.83522711456-11458

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp6162I162IatTatC147176All0.000028
ORF1ab/nsp6162I162IatTatC5555B.1.1770.000724
ORF1ab/nsp6162I162IatTatC2828B.1.2580.001863
ORF1ab/nsp6162I162IatTatC520AY.1030.000031
ORF1ab/nsp6162I162IatTatC1212AY.430.000053
ORF1ab/nsp6162I162IatTatC79B.1.1.70.000006
ORF1ab/nsp6162I162IatTatC66B.1.438.10.000644
ORF1ab/nsp6162I162IatTatC56B.1.617.20.000019
ORF1ab/nsp6162I162IatTatC240.111111
ORF1ab/nsp6162I162IatTatC44B.1.4480.010499
ORF1ab/nsp6162I162IatTatC22AY.1020.000053
ORF1ab/nsp6162I162IatTatC22AY.39.10.000079
ORF1ab/nsp6162I162IatTatC22AY.40.000003
ORF1ab/nsp6162I162IatTatC22AY.410.000588
ORF1ab/nsp6162I162IatTatC22B.1.1.5190.000079
ORF1ab/nsp6162I162IatTatC22P.10.000032
ORF1ab/nsp6162I162IatTatC11AY.1000.000046
ORF1ab/nsp6162I162IatTatC11AY.230.00007
ORF1ab/nsp6162I162IatTatC11AY.440.000006
ORF1ab/nsp6162I162IatTatC11AY.98.10.000048
ORF1ab/nsp6162I162IatTatC11B.10.000009
ORF1ab/nsp6162I162IatTatC11B.1.1.2140.000055
ORF1ab/nsp6162I162IatTatC11B.1.1600.000031
ORF1ab/nsp6162I162IatTatC11B.1.617.10.000129
ORF1ab/nsp6162I162IatTatC11B.400.000364
ORF1ab/nsp6162I162IatTatC11P.1.10.000318
ORF1ab/nsp6162I162IatTatC11Q.80.000165