CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp6 : CodonNum = 121

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp6121V121VV3690VsyngtGgtT848873050.86062711333-11335
ORF1ab/nsp6121V121VV3690VsyngtGgtA848810210.12028711333-11335
ORF1ab/nsp6121V121VV3690VsyngtGgtC84881620.019085811333-11335
ORF1ab/nsp6121V121LV3690LnonsynGtgTtg232323180.99784811333-11335
ORF1ab/nsp6121V121LV3690LnonsynGtgCtg232340.0017219111333-11335
ORF1ab/nsp6121V121LV3690LnonsynGtGCtC232310.00043047811333-11335
ORF1ab/nsp6121V121MV3690MnonsynGtgAtg169169111333-11335
ORF1ab/nsp6121V121AV3690AnonsyngTggCg64630.98437511333-11335
ORF1ab/nsp6121V121AV3690AnonsyngTGgCA6410.01562511333-11335
ORF1ab/nsp6121V121FV3690FnonsynGtGTtT77111333-11335
ORF1ab/nsp6121V121delV3690deldelGTG---77111333-11335
ORF1ab/nsp6121V121GV3690GnonsyngTggGg55111333-11335
ORF1ab/nsp6121V121EV3690EnonsyngTggAg540.811333-11335
ORF1ab/nsp6121V121del1V3690del1delgtGgt-530.611333-11335
ORF1ab/nsp6121V121del1V3690del1delGtg-tg520.411333-11335
ORF1ab/nsp6121V121EV3690EnonsyngTGgAA510.211333-11335
ORF1ab/nsp6121V121KV3690KnonsynGTGAAA11111333-11335
ORF1ab/nsp6121V121del2V3690del2delGTg--g11111333-11335

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp6121V121VgtGgtT73058488All0.001397
ORF1ab/nsp6121V121VgtGgtA10218488All0.000195
ORF1ab/nsp6121V121VgtGgtC1628488All0.000031
ORF1ab/nsp6121V121LGtgTtg23182323All0.000443
ORF1ab/nsp6121V121LGtgCtg42323All0.000001
ORF1ab/nsp6121V121LGtGCtC12323All0
ORF1ab/nsp6121V121LGtgTtg17901790AY.40.002786
ORF1ab/nsp6121V121VgtGgtT8601007B.1.617.20.003238
ORF1ab/nsp6121V121VgtGgtA1381007B.1.617.20.00052
ORF1ab/nsp6121V121VgtGgtC91007B.1.617.20.000034
ORF1ab/nsp6121V121VgtGgtT859954AY.40.001337
ORF1ab/nsp6121V121VgtGgtA74954AY.40.000115
ORF1ab/nsp6121V121VgtGgtC21954AY.40.000033
ORF1ab/nsp6121V121VgtGgtT820920B.1.1.70.000734
ORF1ab/nsp6121V121VgtGgtC62920B.1.1.70.000056
ORF1ab/nsp6121V121VgtGgtA38920B.1.1.70.000034
ORF1ab/nsp6121V121VgtGgtA375485AY.250.002256
ORF1ab/nsp6121V121VgtGgtT110485AY.250.000662
ORF1ab/nsp6121V121VgtGgtT339339AY.610.03552
ORF1ab/nsp6121V121VgtGgtT232335AY.30.002308
ORF1ab/nsp6121V121VgtGgtA103335AY.30.001024
ORF1ab/nsp6121V121VgtGgtT274281AY.1030.001701
ORF1ab/nsp6121V121VgtGgtA6281AY.1030.000037
ORF1ab/nsp6121V121VgtGgtC1281AY.1030.000006
ORF1ab/nsp6121V121VgtGgtT263280AY.430.001165
ORF1ab/nsp6121V121VgtGgtA12280AY.430.000053
ORF1ab/nsp6121V121VgtGgtC5280AY.430.000022
ORF1ab/nsp6121V121VgtGgtT276277B.1.1.5190.01096
ORF1ab/nsp6121V121VgtGgtA1277B.1.1.5190.00004
ORF1ab/nsp6121V121VgtGgtT119238AY.1020.003155
ORF1ab/nsp6121V121VgtGgtA118238AY.1020.003129
ORF1ab/nsp6121V121VgtGgtC1238AY.1020.000027
ORF1ab/nsp6121V121VgtGgtT212228AY.440.00129
ORF1ab/nsp6121V121VgtGgtA16228AY.440.000097
ORF1ab/nsp6121V121MGtgAtg169169All0.000032
ORF1ab/nsp6121V121VgtGgtT149159B.10.001365
ORF1ab/nsp6121V121VgtGgtA8159B.10.000073
ORF1ab/nsp6121V121VgtGgtC2159B.10.000018
ORF1ab/nsp6121V121VgtGgtT129129B.1.2210.009163
ORF1ab/nsp6121V121VgtGgtT122126B.1.10.002213
ORF1ab/nsp6121V121VgtGgtC3126B.1.10.000054
ORF1ab/nsp6121V121VgtGgtA1126B.1.10.000018
ORF1ab/nsp6121V121VgtGgtT115121B.1.20.001013
ORF1ab/nsp6121V121VgtGgtA4121B.1.20.000035
ORF1ab/nsp6121V121VgtGgtC2121B.1.20.000018
ORF1ab/nsp6121V121VgtGgtT110112P.10.001733
ORF1ab/nsp6121V121VgtGgtA2112P.10.000032
ORF1ab/nsp6121V121VgtGgtT9797AY.75.10.01749
ORF1ab/nsp6121V121VgtGgtT8491AY.1060.028131
ORF1ab/nsp6121V121VgtGgtA691AY.1060.002009
ORF1ab/nsp6121V121VgtGgtC191AY.1060.000335
ORF1ab/nsp6121V121VgtGgtT7777B.1.1.10.025155
ORF1ab/nsp6121V121VgtGgtT7576AY.4.20.001627
ORF1ab/nsp6121V121VgtGgtA176AY.4.20.000022
ORF1ab/nsp6121V121VgtGgtT6369AY.390.001557
ORF1ab/nsp6121V121VgtGgtA669AY.390.000148
ORF1ab/nsp6121V121VgtGgtT6666P.1.150.015335
ORF1ab/nsp6121V121VgtGgtT6565AY.340.006303
ORF1ab/nsp6121V121AgTggCg6364All0.000012
ORF1ab/nsp6121V121AgTGgCA164All0
ORF1ab/nsp6121V121LGtgTtg6262B.1.617.20.000233
ORF1ab/nsp6121V121VgtGgtT5760B.1.1770.000751
ORF1ab/nsp6121V121VgtGgtC260B.1.1770.000026
ORF1ab/nsp6121V121VgtGgtA160B.1.1770.000013
ORF1ab/nsp6121V121VgtGgtT6060P.1.130.053908
ORF1ab/nsp6121V121VgtGgtT5858B.1.1600.001809
ORF1ab/nsp6121V121VgtGgtT5555AY.39.10.002179
ORF1ab/nsp6121V121LGtgTtg5454AY.1200.002008
ORF1ab/nsp6121V121VgtGgtT4242AY.1200.001562
ORF1ab/nsp6121V121VgtGgtT4040B.1.240.11
ORF1ab/nsp6121V121VgtGgtT3939B.1.6210.003452
ORF1ab/nsp6121V121VgtGgtC2838AY.1210.003789
ORF1ab/nsp6121V121VgtGgtT1038AY.1210.001353
ORF1ab/nsp6121V121VgtGgtT3636B.1.177.600.007864
ORF1ab/nsp6121V121VgtGgtT3436B.1.3510.001011
ORF1ab/nsp6121V121VgtGgtA236B.1.3510.000059
ORF1ab/nsp6121V121AgTggCg3636B.1.4290.000847
ORF1ab/nsp6121V121VgtGgtT3435AY.200.001321
ORF1ab/nsp6121V121VgtGgtA135AY.200.000039
ORF1ab/nsp6121V121LGtgTtg3535B.1.1.70.000031
ORF1ab/nsp6121V121VgtGgtT3434AY.1000.001564
ORF1ab/nsp6121V121LGtgTtg3434B.1.1.280.010582
ORF1ab/nsp6121V121VgtGgtT3233AY.260.000906
ORF1ab/nsp6121V121VgtGgtA133AY.260.000028
ORF1ab/nsp6121V121VgtGgtT3132AY.330.00207
ORF1ab/nsp6121V121VgtGgtC132AY.330.000067
ORF1ab/nsp6121V121VgtGgtT3032AY.460.003122
ORF1ab/nsp6121V121VgtGgtA232AY.460.000208
ORF1ab/nsp6121V121LGtgTtg3232AY.9.20.001175
ORF1ab/nsp6121V121LGtgTtg3030B.1.4000.01287
ORF1ab/nsp6121V121VgtGgtT2929B.1.1.2840.003115
ORF1ab/nsp6121V121LGtgTtg2828AY.250.000168
ORF1ab/nsp6121V121VgtGgtT2828Q.10.003537
ORF1ab/nsp6121V121VgtGgtT2727B.1.466.10.194245
ORF1ab/nsp6121V121VgtGgtT2226AY.230.001534
ORF1ab/nsp6121V121VgtGgtA426AY.230.000279
ORF1ab/nsp6121V121VgtGgtT2226B.1.360.00321
ORF1ab/nsp6121V121VgtGgtA326B.1.360.000438
ORF1ab/nsp6121V121VgtGgtC126B.1.360.000146
ORF1ab/nsp6121V121VgtGgtT2425AY.50.000496
ORF1ab/nsp6121V121VgtGgtA125AY.50.000021
ORF1ab/nsp6121V121VgtGgtA1725AY.540.001621
ORF1ab/nsp6121V121VgtGgtT625AY.540.000572
ORF1ab/nsp6121V121VgtGgtC225AY.540.000191
ORF1ab/nsp6121V121VgtGgtT2424R.10.00216
ORF1ab/nsp6121V121VgtGgtT2123AY.1190.000741
ORF1ab/nsp6121V121VgtGgtA223AY.1190.000071
ORF1ab/nsp6121V121VgtGgtT2122AY.360.003112
ORF1ab/nsp6121V121VgtGgtA122AY.360.000148
ORF1ab/nsp6121V121MGtgAtg2222AY.40.000034
ORF1ab/nsp6121V121VgtGgtT2222D.20.001651
ORF1ab/nsp6121V121VgtGgtT2121AY.9.10.001758
ORF1ab/nsp6121V121VgtGgtT1919AY.470.000591
ORF1ab/nsp6121V121VgtGgtT1919AY.850.008116
ORF1ab/nsp6121V121MGtgAtg1919B.1.1770.00025
ORF1ab/nsp6121V121VgtGgtT1818AY.16.10.008459
ORF1ab/nsp6121V121VgtGgtT1818AY.580.016334
ORF1ab/nsp6121V121VgtGgtT1818B.1.6370.001315
ORF1ab/nsp6121V121VgtGgtT1818Q.30.002611
ORF1ab/nsp6121V121VgtGgtA1617AY.1080.017641
ORF1ab/nsp6121V121VgtGgtT117AY.1080.001103
ORF1ab/nsp6121V121VgtGgtT1717AY.710.008076
ORF1ab/nsp6121V121VgtGgtT1617B.1.4290.000376
ORF1ab/nsp6121V121VgtGgtC117B.1.4290.000024
ORF1ab/nsp6121V121VgtGgtT1517B.1.5260.000353
ORF1ab/nsp6121V121VgtGgtA217B.1.5260.000047
ORF1ab/nsp6121V121MGtgAtg1616AY.1030.000099
ORF1ab/nsp6121V121VgtGgtT1616B.1.1.3480.012739
ORF1ab/nsp6121V121LGtgTtg1616B.1.4290.000376
ORF1ab/nsp6121V121MGtgAtg1616B.1.617.20.00006
ORF1ab/nsp6121V121VgtGgtT1616P.1.10.005083
ORF1ab/nsp6121V121MGtgAtg1515AY.390.000371
ORF1ab/nsp6121V121VgtGgtT1515B.1.617.10.001934
ORF1ab/nsp6121V121VgtGgtT1414AD.20.003065
ORF1ab/nsp6121V121VgtGgtT1114AY.1180.000689
ORF1ab/nsp6121V121VgtGgtA314AY.1180.000188
ORF1ab/nsp6121V121MGtgAtg1414AY.1200.000521
ORF1ab/nsp6121V121LGtgTtg1414AY.290.000221
ORF1ab/nsp6121V121AgTggCg1414B.1.1.70.000013
ORF1ab/nsp6121V121VgtGgtT1414P.20.002613
ORF1ab/nsp6121V121VgtGgtT1013AY.420.000402
ORF1ab/nsp6121V121VgtGgtA313AY.420.000121
ORF1ab/nsp6121V121LGtgTtg1213AY.430.000053
ORF1ab/nsp6121V121LGtgCtg113AY.430.000004
ORF1ab/nsp6121V121VgtGgtT1313AY.60.000535
ORF1ab/nsp6121V121LGtgTtg1212AY.1030.000075
ORF1ab/nsp6121V121VgtGgtT1212AY.160.004556
ORF1ab/nsp6121V121VgtGgtT1212AY.9.20.000441
ORF1ab/nsp6121V121MGtgAtg1212B.1.1.70.000011
ORF1ab/nsp6121V121VgtGgtT1111AY.1140.002542
ORF1ab/nsp6121V121VgtGgtT911AY.1170.000761
ORF1ab/nsp6121V121VgtGgtA111AY.1170.000085
ORF1ab/nsp6121V121VgtGgtC111AY.1170.000085
ORF1ab/nsp6121V121VgtGgtT1111AY.46.60.000794
ORF1ab/nsp6121V121VgtGgtT811AY.670.003714
ORF1ab/nsp6121V121VgtGgtA311AY.670.001393
ORF1ab/nsp6121V121VgtGgtT911AY.980.000711
ORF1ab/nsp6121V121VgtGgtA211AY.980.000158
ORF1ab/nsp6121V121VgtGgtT1010AY.1070.00466
ORF1ab/nsp6121V121VgtGgtT810AY.290.000126
ORF1ab/nsp6121V121VgtGgtC110AY.290.000016
ORF1ab/nsp6121V121VgtGgtA110AY.290.000016
ORF1ab/nsp6121V121LGtgTtg1010AY.30.000099
ORF1ab/nsp6121V121LGtgTtg1010AY.420.000402
ORF1ab/nsp6121V121LGtgTtg1010AY.70.00196
ORF1ab/nsp6121V121VgtGgtT1010B.1.1.2160.008905
ORF1ab/nsp6121V121LGtgTtg1010B.1.20.000088
ORF1ab/nsp6121V121VgtGgtT910B.1.36.290.004656
ORF1ab/nsp6121V121VgtGgtA110B.1.36.290.000517
ORF1ab/nsp6121V121LGtgTtg1010B.1.4250.02994
ORF1ab/nsp6121V121VgtGgtA510C.370.00058
ORF1ab/nsp6121V121VgtGgtT510C.370.00058
ORF1ab/nsp6121V121VgtGgtT910P.1.140.00043
ORF1ab/nsp6121V121VgtGgtA110P.1.140.000048
ORF1ab/nsp6121V121VgtGgtT99AY.130.001449
ORF1ab/nsp6121V121LGtgTtg99AY.260.000255
ORF1ab/nsp6121V121VgtGgtT99AY.570.005906
ORF1ab/nsp6121V121LGtgTtg89B.10.000073
ORF1ab/nsp6121V121LGtGCtC19B.10.000009
ORF1ab/nsp6121V121VgtGgtT99B.1.1.280.002801
ORF1ab/nsp6121V121VgtGgtT99B.1.2340.001187
ORF1ab/nsp6121V121MGtgAtg99B.1.258.110.003567
ORF1ab/nsp6121V121VgtGgtT99B.1.5960.000784
ORF1ab/nsp6121V121VgtGgtC88AY.100.00424
ORF1ab/nsp6121V121VgtGgtT88AY.1160.002294
ORF1ab/nsp6121V121VgtGgtT88AY.3.10.000682
ORF1ab/nsp6121V121LGtgTtg88AY.390.000198
ORF1ab/nsp6121V121LGtgTtg88AY.50.000165
ORF1ab/nsp6121V121VgtGgtT88AY.510.007273
ORF1ab/nsp6121V121VgtGgtT88AY.700.001668
ORF1ab/nsp6121V121VgtGgtT88B.1.1.1630.061069
ORF1ab/nsp6121V121LGtgTtg88B.1.2340.001056
ORF1ab/nsp6121V121VgtGgtT88B.1.5950.002088
ORF1ab/nsp6121V121VgtGgtT77A.2.50.003493
ORF1ab/nsp6121V121delGTG---77All0.000001
ORF1ab/nsp6121V121FGtGTtT77All0.000001
ORF1ab/nsp6121V121VgtGgtT67AY.1100.000676
ORF1ab/nsp6121V121VgtGgtA17AY.1100.000113
ORF1ab/nsp6121V121AgTggCg77AY.40.000011
ORF1ab/nsp6121V121MGtgAtg77B.10.000064
ORF1ab/nsp6121V121VgtGgtT77B.1.1.3970.015766
ORF1ab/nsp6121V121VgtGgtT77B.1.1.5210.037433
ORF1ab/nsp6121V121VgtGgtT67B.1.1110.007051
ORF1ab/nsp6121V121VgtGgtC17B.1.1110.001175
ORF1ab/nsp6121V121VgtGgtT47B.1.2580.000266
ORF1ab/nsp6121V121VgtGgtC37B.1.2580.0002
ORF1ab/nsp6121V121VgtGgtT77B.1.6050.041667
ORF1ab/nsp6121V121LGtgTtg77P.10.00011
ORF1ab/nsp6121V121VgtGgtT56AY.370.00158
ORF1ab/nsp6121V121VgtGgtA16AY.370.000316
ORF1ab/nsp6121V121VgtGgtT66AY.4.50.000645
ORF1ab/nsp6121V121VgtGgtT56AY.740.000578
ORF1ab/nsp6121V121VgtGgtA16AY.740.000116
ORF1ab/nsp6121V121VgtGgtT66AY.90.000406
ORF1ab/nsp6121V121VgtGgtT66B.1.110.30.00431
ORF1ab/nsp6121V121GgTggGg55All0.000001
ORF1ab/nsp6121V121EgTggAg45All0.000001
ORF1ab/nsp6121V121del1gtGgt-35All0.000001
ORF1ab/nsp6121V121del1Gtg-tg25All0
ORF1ab/nsp6121V121EgTGgAA15All0
ORF1ab/nsp6121V121VgtGgtT55AY.1130.000712
ORF1ab/nsp6121V121LGtgTtg55AY.200.000194
ORF1ab/nsp6121V121VgtGgtT55AY.4.40.002046
ORF1ab/nsp6121V121VgtGgtA55AY.400.004822
ORF1ab/nsp6121V121VgtGgtT35AY.5.30.001012
ORF1ab/nsp6121V121VgtGgtA25AY.5.30.000675
ORF1ab/nsp6121V121VgtGgtT55B.1.1.3060.002192
ORF1ab/nsp6121V121VgtGgtT55B.1.1.3170.002058
ORF1ab/nsp6121V121VgtGgtT55B.1.1.4340.001743
ORF1ab/nsp6121V121VgtGgtT55B.1.1.4860.007886
ORF1ab/nsp6121V121VgtGgtT55B.1.214.20.002998
ORF1ab/nsp6121V121VgtGgtT55B.1.3110.001373
ORF1ab/nsp6121V121VgtGgtT55B.1.3910.005637
ORF1ab/nsp6121V121VgtGgtT55B.1.4270.000252
ORF1ab/nsp6121V121VgtGgtT55B.1.5250.000566
ORF1ab/nsp6121V121VgtGgtT44AY.116.10.001246
ORF1ab/nsp6121V121VgtGgtT44AY.140.000352
ORF1ab/nsp6121V121VgtGgtT44AY.190.004561
ORF1ab/nsp6121V121MGtgAtg44AY.23.10.001669
ORF1ab/nsp6121V121LGtgTtg44AY.270.000259
ORF1ab/nsp6121V121MGtgAtg44AY.440.000024
ORF1ab/nsp6121V121LGtgTtg44AY.440.000024
ORF1ab/nsp6121V121VgtGgtA34AY.46.20.001906
ORF1ab/nsp6121V121VgtGgtT14AY.46.20.000635
ORF1ab/nsp6121V121VgtGgtT44AY.46.50.000794
ORF1ab/nsp6121V121VgtGgtT44AY.560.006421
ORF1ab/nsp6121V121LGtgTtg44AY.730.002661
ORF1ab/nsp6121V121VgtGgtT44AY.750.000224
ORF1ab/nsp6121V121LGtgTtg44AY.98.10.000194
ORF1ab/nsp6121V121VgtGgtT44AY.99.20.000369
ORF1ab/nsp6121V121VgtGgtT44B.1.1.2140.000222
ORF1ab/nsp6121V121VgtGgtT44B.1.1.2220.000816
ORF1ab/nsp6121V121MGtgAtg44B.1.1.2280.012195
ORF1ab/nsp6121V121VgtGgtT44B.1.1.2790.004484
ORF1ab/nsp6121V121FGtGTtT44B.1.1.70.000004
ORF1ab/nsp6121V121VgtGgtT44B.1.177.790.009368
ORF1ab/nsp6121V121VgtGgtT44B.1.221.30.003333
ORF1ab/nsp6121V121VgtGgtT34B.1.2430.000209
ORF1ab/nsp6121V121VgtGgtC14B.1.2430.00007
ORF1ab/nsp6121V121VgtGgtT44B.1.2650.005083
ORF1ab/nsp6121V121VgtGgtT44B.1.3620.006163
ORF1ab/nsp6121V121VgtGgtT44B.1.4080.01476
ORF1ab/nsp6121V121VgtGgtT44B.1.5600.018519
ORF1ab/nsp6121V121VgtGgtT44P.1.100.001078
ORF1ab/nsp6121V121VgtGgtT44P.1.70.001277
ORF1ab/nsp6121V121VgtGgtT33A.23.10.002113
ORF1ab/nsp6121V121LGtgTtg33AY.1020.00008
ORF1ab/nsp6121V121LGtgTtg33AY.230.000209
ORF1ab/nsp6121V121VgtGgtT33AY.270.000194
ORF1ab/nsp6121V121VgtGgtA23AY.350.000466
ORF1ab/nsp6121V121VgtGgtT13AY.350.000233
ORF1ab/nsp6121V121MGtgAtg33AY.4.20.000065
ORF1ab/nsp6121V121VgtGgtT33AY.4.2.10.000447
ORF1ab/nsp6121V121VgtGgtA23AY.410.000588
ORF1ab/nsp6121V121VgtGgtT13AY.410.000294
ORF1ab/nsp6121V121LGtgTtg33AY.450.000365
ORF1ab/nsp6121V121VgtGgtT23AY.450.000243
ORF1ab/nsp6121V121VgtGgtA13AY.450.000122
ORF1ab/nsp6121V121VgtGgtT23AY.550.001835
ORF1ab/nsp6121V121VgtGgtA13AY.550.000917
ORF1ab/nsp6121V121VgtGgtT33AY.620.001307
ORF1ab/nsp6121V121VgtGgtA23AY.640.00119
ORF1ab/nsp6121V121VgtGgtT13AY.640.000595
ORF1ab/nsp6121V121VgtGgtT33AY.650.001599
ORF1ab/nsp6121V121VgtGgtT23AY.660.002139
ORF1ab/nsp6121V121VgtGgtC13AY.660.00107
ORF1ab/nsp6121V121VgtGgtT33AY.690.00056
ORF1ab/nsp6121V121VgtGgtT33AY.98.10.000145
ORF1ab/nsp6121V121LGtgTtg33B.1.10.000054
ORF1ab/nsp6121V121VgtGgtT33B.1.1.2210.030303
ORF1ab/nsp6121V121VgtGgtT33B.1.1.3180.000905
ORF1ab/nsp6121V121LGtgTtg33B.1.1770.00004
ORF1ab/nsp6121V121VgtGgtT33B.1.177.190.004292
ORF1ab/nsp6121V121VgtGgtT33B.1.177.210.000229
ORF1ab/nsp6121V121VgtGgtT33B.1.177.570.000843
ORF1ab/nsp6121V121VgtGgtT33B.1.3360.007317
ORF1ab/nsp6121V121VgtGgtT33B.1.3610.003866
ORF1ab/nsp6121V121VgtGgtT33B.1.4260.003027
ORF1ab/nsp6121V121VgtGgtT33B.1.4280.003061
ORF1ab/nsp6121V121VgtGgtC23B.1.4990.002101
ORF1ab/nsp6121V121VgtGgtT13B.1.4990.00105
ORF1ab/nsp6121V121VgtGgtA33B.1.5820.001472
ORF1ab/nsp6121V121LGtgTtg33B.1.5950.000783
ORF1ab/nsp6121V121VgtGgtT33B.1.6200.002838
ORF1ab/nsp6121V121VgtGgtT33B.1.6270.006061
ORF1ab/nsp6121V121VgtGgtT33B.1.6280.001057
ORF1ab/nsp6121V121VgtGgtT33C.350.002322
ORF1ab/nsp6121V121VgtGgtT33D.50.014925
ORF1ab/nsp6121V121VgtGgtA33M.10.069767
ORF1ab/nsp6121V121LGtgTtg33P.1.170.000485
ORF1ab/nsp6121V121VgtGgtT33P.70.0131
ORF1ab/nsp6121V121LGtgTtg22AA.10.014493
ORF1ab/nsp6121V121MGtgAtg22AY.1020.000053
ORF1ab/nsp6121V121VgtGgtT22AY.1050.001286
ORF1ab/nsp6121V121VgtGgtT12AY.1110.000183
ORF1ab/nsp6121V121VgtGgtA12AY.1110.000183
ORF1ab/nsp6121V121LGtgTtg22AY.1170.000169
ORF1ab/nsp6121V121VgtGgtT22AY.20.000712
ORF1ab/nsp6121V121VgtGgtT22AY.240.000862
ORF1ab/nsp6121V121MGtgAtg22AY.250.000012
ORF1ab/nsp6121V121LGtgTtg22AY.4.20.000043
ORF1ab/nsp6121V121MGtgAtg22AY.430.000009
ORF1ab/nsp6121V121LGtgTtg22AY.470.000062
ORF1ab/nsp6121V121VgtGgtT22AY.520.001629
ORF1ab/nsp6121V121VgtGgtT22AY.590.001059
ORF1ab/nsp6121V121VgtGgtT22AY.680.000547
ORF1ab/nsp6121V121LGtgTtg22AY.750.000112
ORF1ab/nsp6121V121LGtgTtg22AY.75.10.000361
ORF1ab/nsp6121V121VgtGgtT22AY.840.000875
ORF1ab/nsp6121V121VgtGgtT22AY.9.2.10.003953
ORF1ab/nsp6121V121VgtGgtA22AY.900.001369
ORF1ab/nsp6121V121VgtGgtA12AY.920.000287
ORF1ab/nsp6121V121VgtGgtT12AY.920.000287
ORF1ab/nsp6121V121VgtGgtA12AY.990.001049
ORF1ab/nsp6121V121VgtGgtT12AY.990.001049
ORF1ab/nsp6121V121VgtGgtT22B0.000256
ORF1ab/nsp6121V121VgtGgtT22B.1.1.1170.019417
ORF1ab/nsp6121V121VgtGgtT22B.1.1.1280.014184
ORF1ab/nsp6121V121VgtGgtT22B.1.1.1890.003026
ORF1ab/nsp6121V121VgtGgtT22B.1.1.2910.001485
ORF1ab/nsp6121V121VgtGgtT22B.1.1.3050.007722
ORF1ab/nsp6121V121VgtGgtT22B.1.1.3110.000716
ORF1ab/nsp6121V121VgtGgtT22B.1.1.3260.003521
ORF1ab/nsp6121V121VgtGgtT22B.1.1.330.000842
ORF1ab/nsp6121V121VgtGgtT22B.1.1.4130.013793
ORF1ab/nsp6121V121VgtGgtT22B.1.1.4140.285714
ORF1ab/nsp6121V121del1gtGgt-22B.1.1.70.000002
ORF1ab/nsp6121V121VgtGgtT22B.1.1270.004396
ORF1ab/nsp6121V121VgtGgtT22B.1.160.170.003401
ORF1ab/nsp6121V121VgtGgtT22B.1.177.870.001456
ORF1ab/nsp6121V121VgtGgtT22B.1.1790.007519
ORF1ab/nsp6121V121MGtgAtg22B.1.20.000018
ORF1ab/nsp6121V121LGtgTtg22B.1.2210.000142
ORF1ab/nsp6121V121LGtgTtg22B.1.2390.002442
ORF1ab/nsp6121V121VgtGgtT22B.1.3240.00321
ORF1ab/nsp6121V121VgtGgtT22B.1.3500.005865
ORF1ab/nsp6121V121MGtgAtg22B.1.360.000292
ORF1ab/nsp6121V121VgtGgtT22B.1.36.100.009569
ORF1ab/nsp6121V121VgtGgtT22B.1.36.190.018519
ORF1ab/nsp6121V121LGtgTtg22B.1.4270.000101
ORF1ab/nsp6121V121VgtGgtT22B.1.466.20.000782
ORF1ab/nsp6121V121VgtGgtT22B.1.5480.071429
ORF1ab/nsp6121V121VgtGgtT22B.1.6090.000959
ORF1ab/nsp6121V121AgTggCg22B.1.617.20.000008
ORF1ab/nsp6121V121VgtGgtT22B.1.6180.008065
ORF1ab/nsp6121V121VgtGgtT22B.1.619.10.001283
ORF1ab/nsp6121V121VgtGgtT22B.400.000729
ORF1ab/nsp6121V121VgtGgtT12C.37.10.002618
ORF1ab/nsp6121V121VgtGgtA12C.37.10.002618
ORF1ab/nsp6121V121VgtGgtT22C.380.016129
ORF1ab/nsp6121V121VgtGgtT22P.1.160.000748
ORF1ab/nsp6121V121VgtGgtT22P.1.90.009615
ORF1ab/nsp6121V121VgtGgtT22P.50.027397
ORF1ab/nsp6121V121LGtgTtg22Q.80.00033
ORF1ab/nsp6121V121VgtGgtT22Q.80.00033
ORF1ab/nsp6121V121VgtGgtT22U.20.017544
ORF1ab/nsp6121V121VgtGgtT11A.10.000282
ORF1ab/nsp6121V121VgtGgtT11A.50.001923
ORF1ab/nsp6121V121del2GTg--g11All0
ORF1ab/nsp6121V121KGTGAAA11All0
ORF1ab/nsp6121V121VgtGgtA11AY.10.000396
ORF1ab/nsp6121V121LGtgTtg11AY.100.00053
ORF1ab/nsp6121V121LGtgTtg11AY.1110.000183
ORF1ab/nsp6121V121LGtgTtg11AY.1190.000035
ORF1ab/nsp6121V121VgtGgtT11AY.120.000316
ORF1ab/nsp6121V121VgtGgtT11AY.120.2.10.000498
ORF1ab/nsp6121V121LGtgTtg11AY.210.001898
ORF1ab/nsp6121V121AgTggCg11AY.250.000006
ORF1ab/nsp6121V121delGTG---11AY.250.000006
ORF1ab/nsp6121V121AgTggCg11AY.270.000065
ORF1ab/nsp6121V121VgtGgtT11AY.29.10.000221
ORF1ab/nsp6121V121MGtgAtg11AY.30.00001
ORF1ab/nsp6121V121LGtgTtg11AY.300.000396
ORF1ab/nsp6121V121MGtgAtg11AY.320.000532
ORF1ab/nsp6121V121LGtgTtg11AY.330.000067
ORF1ab/nsp6121V121MGtgAtg11AY.340.000097
ORF1ab/nsp6121V121VgtGgtT11AY.34.10.00051
ORF1ab/nsp6121V121MGtgAtg11AY.34.10.00051
ORF1ab/nsp6121V121LGtgTtg11AY.360.000148
ORF1ab/nsp6121V121MGtgAtg11AY.360.000148
ORF1ab/nsp6121V121LGtgTtg11AY.370.000316
ORF1ab/nsp6121V121GgTggGg11AY.39.10.00004
ORF1ab/nsp6121V121EgTggAg11AY.39.10.00004
ORF1ab/nsp6121V121GgTggGg11AY.40.000002
ORF1ab/nsp6121V121delGTG---11AY.40.000002
ORF1ab/nsp6121V121LGtgTtg11AY.4.2.10.000149
ORF1ab/nsp6121V121VgtGgtA11AY.4.30.000842
ORF1ab/nsp6121V121LGtgCtg11AY.410.000294
ORF1ab/nsp6121V121GgTggGg11AY.420.00004
ORF1ab/nsp6121V121GgTggGg11AY.430.000004
ORF1ab/nsp6121V121KGTGAAA11AY.440.000006
ORF1ab/nsp6121V121LGtgTtg11AY.460.000104
ORF1ab/nsp6121V121VgtGgtT11AY.46.10.001027
ORF1ab/nsp6121V121VgtGgtT11AY.46.40.000165
ORF1ab/nsp6121V121VgtGgtT11AY.530.000288
ORF1ab/nsp6121V121LGtgTtg11AY.60.000041
ORF1ab/nsp6121V121VgtGgtT11AY.600.000938
ORF1ab/nsp6121V121FGtGTtT11AY.610.000105
ORF1ab/nsp6121V121LGtgTtg11AY.610.000105
ORF1ab/nsp6121V121LGtgTtg11AY.640.000595
ORF1ab/nsp6121V121EgTGgAA11AY.670.000464
ORF1ab/nsp6121V121LGtgTtg11AY.680.000274
ORF1ab/nsp6121V121MGtgAtg11AY.7.10.000113
ORF1ab/nsp6121V121VgtGgtT11AY.7.20.000559
ORF1ab/nsp6121V121VgtGgtT11AY.720.001361
ORF1ab/nsp6121V121FGtGTtT11AY.75.10.00018
ORF1ab/nsp6121V121delGTG---11AY.780.001541
ORF1ab/nsp6121V121LGtgTtg11AY.790.001211
ORF1ab/nsp6121V121VgtGgtT11AY.830.001724
ORF1ab/nsp6121V121LGtgTtg11AY.870.000833
ORF1ab/nsp6121V121MGtgAtg11AY.9.20.000037
ORF1ab/nsp6121V121VgtGgtA11AY.910.00073
ORF1ab/nsp6121V121LGtgTtg11AY.99.20.000092
ORF1ab/nsp6121V121delGTG---11B.10.000009
ORF1ab/nsp6121V121AgTggCg11B.10.000009
ORF1ab/nsp6121V121del1Gtg-tg11B.10.000009
ORF1ab/nsp6121V121AgTGgCA11B.1.1.1390.022727
ORF1ab/nsp6121V121VgtGgtT11B.1.1.1740.003378
ORF1ab/nsp6121V121VgtGgtT11B.1.1.1980.001468
ORF1ab/nsp6121V121MGtgAtg11B.1.1.2090.008929
ORF1ab/nsp6121V121VgtGgtT11B.1.1.2170.003636
ORF1ab/nsp6121V121VgtGgtT11B.1.1.2200.001859
ORF1ab/nsp6121V121EgTggAg11B.1.1.2220.000204
ORF1ab/nsp6121V121LGtgTtg11B.1.1.2220.000204
ORF1ab/nsp6121V121LGtgTtg11B.1.1.2670.010101
ORF1ab/nsp6121V121VgtGgtT11B.1.1.2730.006757
ORF1ab/nsp6121V121EgTggAg11B.1.1.280.000311
ORF1ab/nsp6121V121LGtgTtg11B.1.1.2840.000107
ORF1ab/nsp6121V121MGtgAtg11B.1.1.2860.002899
ORF1ab/nsp6121V121VgtGgtT11B.1.1.2940.001266
ORF1ab/nsp6121V121VgtGgtT11B.1.1.2960.018182
ORF1ab/nsp6121V121VgtGgtT11B.1.1.2980.000862
ORF1ab/nsp6121V121VgtGgtT11B.1.1.3010.001179
ORF1ab/nsp6121V121VgtGgtA11B.1.1.3040.002809
ORF1ab/nsp6121V121VgtGgtT11B.1.1.3070.002532
ORF1ab/nsp6121V121MGtgAtg11B.1.1.3110.000358
ORF1ab/nsp6121V121LGtgTtg11B.1.1.3170.000412
ORF1ab/nsp6121V121MGtgAtg11B.1.1.330.000421
ORF1ab/nsp6121V121VgtGgtT11B.1.1.3440.010753
ORF1ab/nsp6121V121VgtGgtT11B.1.1.3540.004386
ORF1ab/nsp6121V121VgtGgtT11B.1.1.3720.000689
ORF1ab/nsp6121V121VgtGgtT11B.1.1.390.00051
ORF1ab/nsp6121V121VgtGgtC11B.1.1.4110.014706
ORF1ab/nsp6121V121VgtGgtT11B.1.1.4330.001425
ORF1ab/nsp6121V121VgtGgtT11B.1.1.500.000679
ORF1ab/nsp6121V121VgtGgtT11B.1.1.5170.006803
ORF1ab/nsp6121V121LGtgCtg11B.1.1.5190.00004
ORF1ab/nsp6121V121VgtGgtT11B.1.1.630.000386
ORF1ab/nsp6121V121delGTG---11B.1.1.70.000001
ORF1ab/nsp6121V121VgtGgtT11B.1.1.830.00271
ORF1ab/nsp6121V121VgtGgtT11B.1.1.890.006061
ORF1ab/nsp6121V121VgtGgtT11B.1.1280.000635
ORF1ab/nsp6121V121VgtGgtT11B.1.1420.002899
ORF1ab/nsp6121V121LGtgTtg11B.1.1460.004237
ORF1ab/nsp6121V121LGtgTtg11B.1.177.300.002513
ORF1ab/nsp6121V121VgtGgtT11B.1.177.40.000211
ORF1ab/nsp6121V121VgtGgtT11B.1.177.430.001477
ORF1ab/nsp6121V121VgtGgtT11B.1.177.450.000381
ORF1ab/nsp6121V121VgtGgtT11B.1.177.60.000977
ORF1ab/nsp6121V121VgtGgtC11B.1.177.630.002703
ORF1ab/nsp6121V121VgtGgtT11B.1.177.70.000165
ORF1ab/nsp6121V121VgtGgtT11B.1.177.760.002494
ORF1ab/nsp6121V121VgtGgtT11B.1.177.770.000726
ORF1ab/nsp6121V121VgtGgtT11B.1.177.810.000189
ORF1ab/nsp6121V121LGtgTtg11B.1.177.830.001481
ORF1ab/nsp6121V121VgtGgtT11B.1.1780.02381
ORF1ab/nsp6121V121VgtGgtT11B.1.2010.005682
ORF1ab/nsp6121V121VgtGgtT11B.1.2100.002132
ORF1ab/nsp6121V121LGtgTtg11B.1.2320.000537
ORF1ab/nsp6121V121LGtgTtg11B.1.2360.002053
ORF1ab/nsp6121V121VgtGgtT11B.1.2370.004975
ORF1ab/nsp6121V121GgTggGg11B.1.2580.000067
ORF1ab/nsp6121V121VgtGgtT11B.1.258.160.001637
ORF1ab/nsp6121V121VgtGgtT11B.1.258.50.008772
ORF1ab/nsp6121V121VgtGgtA11B.1.2940.032258
ORF1ab/nsp6121V121VgtGgtT11B.1.3050.002151
ORF1ab/nsp6121V121VgtGgtT11B.1.3490.000715
ORF1ab/nsp6121V121LGtgCtg11B.1.3510.00003
ORF1ab/nsp6121V121VgtGgtT11B.1.3560.001727
ORF1ab/nsp6121V121LGtgTtg11B.1.360.000146
ORF1ab/nsp6121V121VgtGgtT11B.1.36.10.00114
ORF1ab/nsp6121V121VgtGgtT11B.1.36.170.000494
ORF1ab/nsp6121V121LGtgTtg11B.1.36.80.001
ORF1ab/nsp6121V121FGtGTtT11B.1.3620.001541
ORF1ab/nsp6121V121VgtGgtT11B.1.3660.004878
ORF1ab/nsp6121V121MGtgAtg11B.1.3970.004854
ORF1ab/nsp6121V121VgtGgtT11B.1.4200.010417
ORF1ab/nsp6121V121VgtGgtT11B.1.4230.010204
ORF1ab/nsp6121V121MGtgAtg11B.1.4270.00005
ORF1ab/nsp6121V121VgtGgtT11B.1.438.10.000107
ORF1ab/nsp6121V121LGtgTtg11B.1.438.10.000107
ORF1ab/nsp6121V121LGtgTtg11B.1.4390.005917
ORF1ab/nsp6121V121VgtGgtT11B.1.4410.009615
ORF1ab/nsp6121V121VgtGgtT11B.1.4590.004082
ORF1ab/nsp6121V121VgtGgtT11B.1.4620.007246
ORF1ab/nsp6121V121LGtgTtg11B.1.466.20.000391
ORF1ab/nsp6121V121VgtGgtT11B.1.4670.04
ORF1ab/nsp6121V121VgtGgtT11B.1.4980.020408
ORF1ab/nsp6121V121VgtGgtT11B.1.5030.002488
ORF1ab/nsp6121V121VgtGgtT11B.1.5090.000866
ORF1ab/nsp6121V121VgtGgtT11B.1.5270.003704
ORF1ab/nsp6121V121VgtGgtT11B.1.5350.028571
ORF1ab/nsp6121V121VgtGgtT11B.1.5450.014493
ORF1ab/nsp6121V121LGtgTtg11B.1.5540.004405
ORF1ab/nsp6121V121VgtGgtT11B.1.5610.000397
ORF1ab/nsp6121V121VgtGgtT11B.1.5650.00081
ORF1ab/nsp6121V121del2GTg--g11B.1.5710.009709
ORF1ab/nsp6121V121VgtGgtT11B.1.5750.000303
ORF1ab/nsp6121V121VgtGgtT11B.1.5760.000907
ORF1ab/nsp6121V121del1Gtg-tg11B.1.5960.000087
ORF1ab/nsp6121V121VgtGgtT11B.1.5970.00463
ORF1ab/nsp6121V121del1gtGgt-11B.1.617.20.000004
ORF1ab/nsp6121V121EgTggAg11B.1.617.20.000004
ORF1ab/nsp6121V121LGtgTtg11B.1.6200.000946
ORF1ab/nsp6121V121delGTG---11B.1.6300.005236
ORF1ab/nsp6121V121VgtGgtT11B.1.6350.017544
ORF1ab/nsp6121V121LGtgTtg11B.400.000364
ORF1ab/nsp6121V121LGtgTtg11B.60.00091
ORF1ab/nsp6121V121VgtGgtT11B.6.60.000889
ORF1ab/nsp6121V121VgtGgtT11C.10.002392
ORF1ab/nsp6121V121VgtGgtT11C.140.004329
ORF1ab/nsp6121V121LGtgTtg11C.360.000911
ORF1ab/nsp6121V121VgtGgtA11C.36.30.000567
ORF1ab/nsp6121V121LGtgTtg11C.370.000116
ORF1ab/nsp6121V121LGtgTtg11D.20.000075
ORF1ab/nsp6121V121delGTG---11N.40.004255
ORF1ab/nsp6121V121VgtGgtT11P.1.120.000484
ORF1ab/nsp6121V121LGtgTtg11P.1.140.000048
ORF1ab/nsp6121V121MGtgAtg11P.1.160.000374
ORF1ab/nsp6121V121VgtGgtT11P.1.170.000162
ORF1ab/nsp6121V121VgtGgtT11P.30.001595
ORF1ab/nsp6121V121VgtGgtT11Q.40.000455
ORF1ab/nsp6121V121AgTggCg11Q.80.000165
ORF1ab/nsp6121V121VgtGgtT11U.30.003861