CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp6 | 105 | L105del | L3674del | del | TTG | --- | 3019 | 3019 | 1 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105M | L3674M | nonsyn | Ttg | Atg | 1309 | 1309 | 1 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105F | L3674F | nonsyn | ttG | ttT | 665 | 649 | 0.97594 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105F | L3674F | nonsyn | ttG | ttC | 665 | 16 | 0.0240602 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105L | L3674L | syn | ttG | ttA | 485 | 347 | 0.715464 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105L | L3674L | syn | Ttg | Ctg | 485 | 138 | 0.284536 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105del2 | L3674del2 | del | tTG | t-- | 482 | 478 | 0.991701 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105del2 | L3674del2 | del | TTG | --N | 482 | 4 | 0.00829876 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105X | L3674X | nonsyn | tTg | tAg | 86 | 66 | 0.767442 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105X | L3674X | nonsyn | tTG | tGA | 86 | 20 | 0.232558 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105Y | L3674Y | nonsyn | tTG | tAT | 68 | 68 | 1 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105del1 | L3674del1 | del | ttG | tt- | 53 | 52 | 0.981132 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105del1 | L3674del1 | del | TtG | -tN | 53 | 1 | 0.0188679 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105V | L3674V | nonsyn | Ttg | Gtg | 28 | 21 | 0.75 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105V | L3674V | nonsyn | TtG | GtT | 28 | 7 | 0.25 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105W | L3674W | nonsyn | tTg | tGg | 26 | 26 | 1 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105S | L3674S | nonsyn | tTg | tCg | 23 | 20 | 0.869565 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105S | L3674S | nonsyn | tTG | tCT | 23 | 3 | 0.130435 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105R | L3674R | nonsyn | TTg | AGg | 9 | 3 | 0.333333 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105R | L3674R | nonsyn | TTG | CGA | 9 | 2 | 0.222222 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105R | L3674R | nonsyn | TTg | CGg | 9 | 2 | 0.222222 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105R | L3674R | nonsyn | TTG | CGT | 9 | 2 | 0.222222 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105E | L3674E | nonsyn | TTg | GAg | 7 | 7 | 1 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105D | L3674D | nonsyn | TTG | GAT | 7 | 7 | 1 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105G | L3674G | nonsyn | TTG | GGT | 6 | 2 | 0.333333 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105G | L3674G | nonsyn | TTg | GGg | 6 | 2 | 0.333333 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105G | L3674G | nonsyn | TTG | GGA | 6 | 2 | 0.333333 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105T | L3674T | nonsyn | TTg | ACg | 4 | 4 | 1 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105I | L3674I | nonsyn | TtG | AtT | 3 | 2 | 0.666667 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105I | L3674I | nonsyn | TtG | AtA | 3 | 1 | 0.333333 | 11285-11287 |
ORF1ab/nsp6 | 105 | L105C | L3674C | nonsyn | tTG | tGT | 2 | 2 | 1 | 11285-11287 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 3019 | 3019 | All | 0.000577 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1843 | 1843 | B.1.1.176 | 0.809754 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 1309 | 1309 | All | 0.00025 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 649 | 665 | All | 0.000124 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttC | 16 | 665 | All | 0.000003 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 347 | 485 | All | 0.000066 |
ORF1ab/nsp6 | 105 | L105L | Ttg | Ctg | 138 | 485 | All | 0.000026 |
ORF1ab/nsp6 | 105 | L105del2 | tTG | t-- | 478 | 482 | All | 0.000091 |
ORF1ab/nsp6 | 105 | L105del2 | TTG | --N | 4 | 482 | All | 0.000001 |
ORF1ab/nsp6 | 105 | L105del2 | tTG | t-- | 451 | 455 | B.1.1.7 | 0.000404 |
ORF1ab/nsp6 | 105 | L105del2 | TTG | --N | 4 | 455 | B.1.1.7 | 0.000004 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 451 | 451 | B.1.627 | 0.911111 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 276 | 276 | B.1.631 | 0.929293 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 257 | 257 | B.1.617.2 | 0.000968 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 249 | 249 | B.1.617.2 | 0.000938 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 206 | 206 | B.1.1.7 | 0.000184 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 134 | 134 | B.1 | 0.001227 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 129 | 129 | C.37 | 0.014972 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 109 | 109 | B.1.214.4 | 0.990909 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 103 | 103 | B.1.214.3 | 0.735714 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 100 | 100 | AY.4 | 0.000156 |
ORF1ab/nsp6 | 105 | L105L | Ttg | Ctg | 77 | 100 | AY.4 | 0.00012 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 23 | 100 | AY.4 | 0.000036 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 86 | 93 | B.1.1.7 | 0.000077 |
ORF1ab/nsp6 | 105 | L105L | Ttg | Ctg | 7 | 93 | B.1.1.7 | 0.000006 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 87 | 87 | P.1 | 0.001371 |
ORF1ab/nsp6 | 105 | L105X | tTg | tAg | 66 | 86 | All | 0.000013 |
ORF1ab/nsp6 | 105 | L105X | tTG | tGA | 20 | 86 | All | 0.000004 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 85 | 85 | AY.102 | 0.002254 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 74 | 76 | AY.44 | 0.00045 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttC | 2 | 76 | AY.44 | 0.000012 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 74 | 74 | P.1 | 0.001166 |
ORF1ab/nsp6 | 105 | L105Y | tTG | tAT | 68 | 68 | All | 0.000013 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 61 | 61 | B.1.1.216 | 0.054319 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 55 | 55 | B.1.526 | 0.001293 |
ORF1ab/nsp6 | 105 | L105del1 | ttG | tt- | 52 | 53 | All | 0.00001 |
ORF1ab/nsp6 | 105 | L105del1 | TtG | -tN | 1 | 53 | All | 0 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 48 | 48 | AY.102 | 0.001273 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 40 | 40 | B.1.1.524 | 0.833333 |
ORF1ab/nsp6 | 105 | L105Y | tTG | tAT | 38 | 38 | P.1 | 0.000599 |
ORF1ab/nsp6 | 105 | L105X | tTg | tAg | 38 | 38 | P.1 | 0.000599 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 36 | 36 | B.1.575 | 0.010922 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 32 | 34 | B.1.1.7 | 0.000029 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttC | 2 | 34 | B.1.1.7 | 0.000002 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 33 | 33 | AY.44 | 0.000201 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 33 | 33 | AY.99.2 | 0.003041 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 32 | 32 | B.1.346 | 0.04194 |
ORF1ab/nsp6 | 105 | L105L | Ttg | Ctg | 31 | 31 | AY.60 | 0.029081 |
ORF1ab/nsp6 | 105 | L105V | Ttg | Gtg | 21 | 28 | All | 0.000004 |
ORF1ab/nsp6 | 105 | L105V | TtG | GtT | 7 | 28 | All | 0.000001 |
ORF1ab/nsp6 | 105 | L105W | tTg | tGg | 26 | 26 | All | 0.000005 |
ORF1ab/nsp6 | 105 | L105S | tTg | tCg | 20 | 23 | All | 0.000004 |
ORF1ab/nsp6 | 105 | L105S | tTG | tCT | 3 | 23 | All | 0.000001 |
ORF1ab/nsp6 | 105 | L105del1 | ttG | tt- | 22 | 23 | B.1.1.7 | 0.00002 |
ORF1ab/nsp6 | 105 | L105del1 | TtG | -tN | 1 | 23 | B.1.1.7 | 0.000001 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 22 | 22 | AY.39 | 0.000544 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 21 | 21 | B.1.1 | 0.000381 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 19 | 20 | B.1 | 0.000174 |
ORF1ab/nsp6 | 105 | L105L | Ttg | Ctg | 1 | 20 | B.1 | 0.000009 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 19 | 19 | AY.103 | 0.000118 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 16 | 19 | AY.4 | 0.000025 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttC | 3 | 19 | AY.4 | 0.000005 |
ORF1ab/nsp6 | 105 | L105X | tTg | tAg | 14 | 19 | B.1.1.7 | 0.000013 |
ORF1ab/nsp6 | 105 | L105X | tTG | tGA | 5 | 19 | B.1.1.7 | 0.000004 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 18 | 18 | B.1.429 | 0.000424 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 17 | 17 | AY.4 | 0.000026 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 17 | 17 | P.1.7 | 0.005428 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 15 | 15 | AY.120 | 0.000558 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 15 | 15 | B.1.1 | 0.000272 |
ORF1ab/nsp6 | 105 | L105Y | tTG | tAT | 15 | 15 | B.1.1.7 | 0.000013 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 13 | 14 | AY.44 | 0.000079 |
ORF1ab/nsp6 | 105 | L105L | Ttg | Ctg | 1 | 14 | AY.44 | 0.000006 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 12 | 12 | AY.25 | 0.000072 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 12 | 12 | B.1 | 0.00011 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 12 | 12 | B.1.1.232 | 0.021779 |
ORF1ab/nsp6 | 105 | L105V | Ttg | Gtg | 8 | 12 | B.1.1.7 | 0.000007 |
ORF1ab/nsp6 | 105 | L105V | TtG | GtT | 4 | 12 | B.1.1.7 | 0.000004 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 12 | 12 | B.1.351 | 0.000357 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 11 | 11 | AY.39 | 0.000272 |
ORF1ab/nsp6 | 105 | L105S | tTg | tCg | 8 | 11 | B.1.1.7 | 0.000007 |
ORF1ab/nsp6 | 105 | L105S | tTG | tCT | 3 | 11 | B.1.1.7 | 0.000003 |
ORF1ab/nsp6 | 105 | L105L | Ttg | Ctg | 7 | 11 | B.1.617.2 | 0.000026 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 4 | 11 | B.1.617.2 | 0.000015 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 11 | 11 | C.37 | 0.001277 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 11 | 11 | P.2 | 0.002053 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 9 | 10 | B.1.1 | 0.000163 |
ORF1ab/nsp6 | 105 | L105L | Ttg | Ctg | 1 | 10 | B.1.1 | 0.000018 |
ORF1ab/nsp6 | 105 | L105R | TTg | AGg | 3 | 9 | All | 0.000001 |
ORF1ab/nsp6 | 105 | L105R | TTG | CGT | 2 | 9 | All | 0 |
ORF1ab/nsp6 | 105 | L105R | TTg | CGg | 2 | 9 | All | 0 |
ORF1ab/nsp6 | 105 | L105R | TTG | CGA | 2 | 9 | All | 0 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 9 | 9 | AY.119 | 0.000318 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 9 | 9 | AY.25 | 0.000054 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 9 | 9 | AY.25 | 0.000054 |
ORF1ab/nsp6 | 105 | L105del2 | tTG | t-- | 9 | 9 | B.1 | 0.000082 |
ORF1ab/nsp6 | 105 | L105del1 | ttG | tt- | 8 | 8 | B.1 | 0.000073 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 8 | 8 | B.1.351.3 | 0.007011 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 8 | 8 | B.1.628 | 0.002819 |
ORF1ab/nsp6 | 105 | L105E | TTg | GAg | 7 | 7 | All | 0.000001 |
ORF1ab/nsp6 | 105 | L105D | TTG | GAT | 7 | 7 | All | 0.000001 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 7 | 7 | AS.1 | 0.066667 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 7 | 7 | AY.109 | 0.005178 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 7 | 7 | AY.43 | 0.000031 |
ORF1ab/nsp6 | 105 | L105W | tTg | tGg | 7 | 7 | B.1.1.7 | 0.000006 |
ORF1ab/nsp6 | 105 | L105del1 | ttG | tt- | 7 | 7 | B.1.526 | 0.000165 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 7 | 7 | P.1 | 0.00011 |
ORF1ab/nsp6 | 105 | L105X | tTG | tGA | 7 | 7 | P.1.1 | 0.002224 |
ORF1ab/nsp6 | 105 | L105G | TTg | GGg | 2 | 6 | 0.111111 | |
ORF1ab/nsp6 | 105 | L105R | TTg | CGg | 2 | 6 | 0.111111 | |
ORF1ab/nsp6 | 105 | L105G | TTG | GGT | 2 | 6 | 0.111111 | |
ORF1ab/nsp6 | 105 | L105R | TTG | CGT | 2 | 6 | 0.111111 | |
ORF1ab/nsp6 | 105 | L105G | TTG | GGA | 2 | 6 | 0.111111 | |
ORF1ab/nsp6 | 105 | L105R | TTG | CGA | 2 | 6 | 0.111111 | |
ORF1ab/nsp6 | 105 | L105G | TTG | GGA | 2 | 6 | All | 0 |
ORF1ab/nsp6 | 105 | L105G | TTg | GGg | 2 | 6 | All | 0 |
ORF1ab/nsp6 | 105 | L105G | TTG | GGT | 2 | 6 | All | 0 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 6 | 6 | AY.36 | 0.000889 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 6 | 6 | B.1.1.519 | 0.000238 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 6 | 6 | B.1.258.11 | 0.002378 |
ORF1ab/nsp6 | 105 | L105X | tTG | tGA | 6 | 6 | B.1.525 | 0.000679 |
ORF1ab/nsp6 | 105 | L105del2 | tTG | t-- | 6 | 6 | B.1.526 | 0.000141 |
ORF1ab/nsp6 | 105 | L105Y | tTG | tAT | 6 | 6 | C.37 | 0.000696 |
ORF1ab/nsp6 | 105 | L105X | tTg | tAg | 6 | 6 | C.37 | 0.000696 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 5 | 5 | AY.3 | 0.00005 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 5 | 5 | AY.3.1 | 0.000426 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 5 | 5 | AY.43 | 0.000022 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 5 | 5 | AY.43 | 0.000022 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 5 | 5 | B.1.1.302 | 0.010373 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 5 | 5 | B.1.2 | 0.000044 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 5 | 5 | B.1.2 | 0.000044 |
ORF1ab/nsp6 | 105 | L105W | tTg | tGg | 5 | 5 | B.1.36 | 0.00073 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 5 | 5 | B.1.525 | 0.000566 |
ORF1ab/nsp6 | 105 | L105W | tTg | tGg | 5 | 5 | B.1.525 | 0.000566 |
ORF1ab/nsp6 | 105 | L105T | TTg | ACg | 4 | 4 | All | 0.000001 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 4 | 4 | AY.2 | 0.001425 |
ORF1ab/nsp6 | 105 | L105S | tTg | tCg | 4 | 4 | AY.4.2 | 0.000087 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 4 | 4 | AY.53 | 0.00115 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttC | 2 | 4 | B.1 | 0.000018 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 2 | 4 | B.1 | 0.000018 |
ORF1ab/nsp6 | 105 | L105E | TTg | GAg | 4 | 4 | B.1.1.7 | 0.000004 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 4 | 4 | B.1.1.7 | 0.000004 |
ORF1ab/nsp6 | 105 | L105D | TTG | GAT | 4 | 4 | B.1.1.7 | 0.000004 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 4 | 4 | B.1.177 | 0.000053 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 4 | 4 | B.1.214.1 | 0.08 |
ORF1ab/nsp6 | 105 | L105V | TtG | GtT | 2 | 4 | P.1 | 0.000032 |
ORF1ab/nsp6 | 105 | L105V | Ttg | Gtg | 2 | 4 | P.1 | 0.000032 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 4 | 4 | P.1.14 | 0.000191 |
ORF1ab/nsp6 | 105 | L105I | TtG | AtT | 2 | 3 | All | 0 |
ORF1ab/nsp6 | 105 | L105I | TtG | AtA | 1 | 3 | All | 0 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 3 | 3 | AY.100 | 0.000138 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 3 | 3 | AY.25 | 0.000018 |
ORF1ab/nsp6 | 105 | L105L | Ttg | Ctg | 2 | 3 | AY.3 | 0.00002 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 1 | 3 | AY.3 | 0.00001 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 2 | 3 | AY.39 | 0.000049 |
ORF1ab/nsp6 | 105 | L105L | Ttg | Ctg | 1 | 3 | AY.39 | 0.000025 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 3 | 3 | AY.43 | 0.000013 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 3 | 3 | AY.5 | 0.000062 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 3 | 3 | AY.9.1 | 0.000251 |
ORF1ab/nsp6 | 105 | L105del1 | ttG | tt- | 3 | 3 | B.1.1 | 0.000054 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 3 | 3 | B.1.1 | 0.000054 |
ORF1ab/nsp6 | 105 | L105R | TTg | AGg | 3 | 3 | B.1.1.7 | 0.000003 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 3 | 3 | B.1.177.4 | 0.000633 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 3 | 3 | B.1.210 | 0.006397 |
ORF1ab/nsp6 | 105 | L105del1 | ttG | tt- | 3 | 3 | B.1.351 | 0.000089 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 2 | 3 | B.1.351 | 0.000059 |
ORF1ab/nsp6 | 105 | L105L | Ttg | Ctg | 1 | 3 | B.1.351 | 0.00003 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 3 | 3 | B.1.526 | 0.000071 |
ORF1ab/nsp6 | 105 | L105V | Ttg | Gtg | 2 | 3 | B.1.526 | 0.000047 |
ORF1ab/nsp6 | 105 | L105V | TtG | GtT | 1 | 3 | B.1.526 | 0.000024 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 3 | 3 | B.1.565 | 0.002431 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 3 | 3 | B.1.617.2 | 0.000011 |
ORF1ab/nsp6 | 105 | L105del1 | ttG | tt- | 3 | 3 | P.1 | 0.000047 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 3 | 3 | P.1.1 | 0.000953 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 3 | 3 | P.1.10 | 0.000808 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 3 | 3 | P.1.4 | 0.00293 |
ORF1ab/nsp6 | 105 | L105C | tTG | tGT | 2 | 2 | 0.111111 | |
ORF1ab/nsp6 | 105 | L105X | tTG | tGA | 2 | 2 | 0.111111 | |
ORF1ab/nsp6 | 105 | L105S | tTg | tCg | 2 | 2 | 0.111111 | |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 2 | 2 | 0.111111 | |
ORF1ab/nsp6 | 105 | L105W | tTg | tGg | 2 | 2 | 0.111111 | |
ORF1ab/nsp6 | 105 | L105T | TTg | ACg | 2 | 2 | 0.111111 | |
ORF1ab/nsp6 | 105 | L105C | tTG | tGT | 2 | 2 | All | 0 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 2 | 2 | AY.103 | 0.000012 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 2 | 2 | AY.117 | 0.000169 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 2 | 2 | AY.118 | 0.000125 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 2 | 2 | AY.120.1 | 0.000642 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 2 | 2 | AY.20 | 0.000078 |
ORF1ab/nsp6 | 105 | L105W | tTg | tGg | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttC | 2 | 2 | AY.36 | 0.000296 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 2 | 2 | AY.4.2 | 0.000043 |
ORF1ab/nsp6 | 105 | L105T | TTg | ACg | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp6 | 105 | L105V | Ttg | Gtg | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 2 | 2 | AY.44 | 0.000012 |
ORF1ab/nsp6 | 105 | L105L | Ttg | Ctg | 2 | 2 | AY.46.1 | 0.002053 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 2 | 2 | AY.98 | 0.000158 |
ORF1ab/nsp6 | 105 | L105I | TtG | AtT | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp6 | 105 | L105S | tTg | tCg | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp6 | 105 | L105del2 | tTG | t-- | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 2 | 2 | B.1.1.1 | 0.000653 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 2 | 2 | B.1.1.219 | 0.01 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 2 | 2 | B.1.1.302 | 0.004149 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttC | 2 | 2 | B.1.1.317 | 0.000823 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 2 | 2 | B.1.1.528 | 0.009615 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 2 | 2 | B.1.160 | 0.000062 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 2 | 2 | B.1.177 | 0.000026 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 2 | 2 | B.1.177.60 | 0.000437 |
ORF1ab/nsp6 | 105 | L105del1 | ttG | tt- | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 2 | 2 | B.1.214.2 | 0.001199 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 2 | 2 | B.1.221 | 0.000142 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 2 | 2 | B.1.234 | 0.000264 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 2 | 2 | B.1.258 | 0.000133 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 2 | 2 | B.1.351 | 0.000059 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 2 | 2 | B.1.36 | 0.000292 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 2 | 2 | B.1.36.8 | 0.002 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 2 | 2 | B.1.427 | 0.000101 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 2 | 2 | B.1.524 | 0.002813 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 2 | 2 | B.1.526 | 0.000047 |
ORF1ab/nsp6 | 105 | L105X | tTg | tAg | 2 | 2 | B.1.526 | 0.000047 |
ORF1ab/nsp6 | 105 | L105Y | tTG | tAT | 2 | 2 | B.1.526 | 0.000047 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 2 | 2 | B.1.538 | 0.016129 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 2 | 2 | B.1.625 | 0.004706 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 2 | 2 | B.1.625 | 0.004706 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 2 | 2 | B.1.628 | 0.000705 |
ORF1ab/nsp6 | 105 | L105L | Ttg | Ctg | 2 | 2 | C.36 | 0.001821 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp6 | 105 | L105E | TTg | GAg | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp6 | 105 | L105D | TTG | GAT | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 2 | 2 | P.1.12 | 0.000968 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 2 | 2 | P.1.15 | 0.000465 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 2 | 2 | P.1.2 | 0.002312 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 2 | 2 | P.1.9 | 0.009615 |
ORF1ab/nsp6 | 105 | L105del2 | tTG | t-- | 1 | 1 | 0.055556 | |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | A | 0.000387 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | AU.3 | 0.00211 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 1 | 1 | AY.1 | 0.000396 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 1 | 1 | AY.104 | 0.001984 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttC | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 1 | 1 | AY.120.2 | 0.001285 |
ORF1ab/nsp6 | 105 | L105L | Ttg | Ctg | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | AY.22 | 0.002092 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp6 | 105 | L105W | tTg | tGg | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp6 | 105 | L105V | Ttg | Gtg | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp6 | 105 | L105V | Ttg | Gtg | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp6 | 105 | L105L | Ttg | Ctg | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp6 | 105 | L105V | Ttg | Gtg | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | AY.4.3 | 0.000842 |
ORF1ab/nsp6 | 105 | L105S | tTg | tCg | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp6 | 105 | L105L | Ttg | Ctg | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 1 | 1 | AY.74 | 0.000116 |
ORF1ab/nsp6 | 105 | L105S | tTg | tCg | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp6 | 105 | L105V | Ttg | Gtg | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | AY.78 | 0.001541 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | AY.91 | 0.00073 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 1 | 1 | AY.99.2 | 0.000092 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 1 | 1 | B | 0.000128 |
ORF1ab/nsp6 | 105 | L105I | TtG | AtA | 1 | 1 | B | 0.000128 |
ORF1ab/nsp6 | 105 | L105V | Ttg | Gtg | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | B.1.1.10 | 0.001115 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 1 | 1 | B.1.1.153 | 0.001095 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 1 | 1 | B.1.1.222 | 0.000204 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | B.1.1.269 | 0.001353 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | B.1.1.294 | 0.001266 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 1 | 1 | B.1.1.301 | 0.001179 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 1 | 1 | B.1.1.316 | 0.000925 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | B.1.1.432 | 0.001266 |
ORF1ab/nsp6 | 105 | L105S | tTg | tCg | 1 | 1 | B.1.1.5 | 0.008333 |
ORF1ab/nsp6 | 105 | L105del1 | ttG | tt- | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | B.1.1.525 | 0.005464 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | B.1.1.72 | 0.030303 |
ORF1ab/nsp6 | 105 | L105del2 | tTG | t-- | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttC | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp6 | 105 | L105del2 | tTG | t-- | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp6 | 105 | L105S | tTg | tCg | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp6 | 105 | L105W | tTg | tGg | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | B.1.214 | 0.003663 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | B.1.214.3 | 0.007143 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp6 | 105 | L105V | Ttg | Gtg | 1 | 1 | B.1.237 | 0.004975 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp6 | 105 | L105V | Ttg | Gtg | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp6 | 105 | L105W | tTg | tGg | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | B.1.314 | 0.007519 |
ORF1ab/nsp6 | 105 | L105Y | tTG | tAT | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp6 | 105 | L105del2 | tTG | t-- | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp6 | 105 | L105X | tTg | tAg | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp6 | 105 | L105del2 | tTG | t-- | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | B.1.356 | 0.001727 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | B.1.36.16 | 0.001425 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | B.1.36.21 | 0.00216 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | B.1.367 | 0.000792 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp6 | 105 | L105del1 | ttG | tt- | 1 | 1 | B.1.371 | 0.001122 |
ORF1ab/nsp6 | 105 | L105del2 | tTG | t-- | 1 | 1 | B.1.375 | 0.00082 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttC | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp6 | 105 | L105L | Ttg | Ctg | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 1 | 1 | B.1.471 | 0.002732 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | B.1.523 | 0.002451 |
ORF1ab/nsp6 | 105 | L105del2 | tTG | t-- | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp6 | 105 | L105del1 | ttG | tt- | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp6 | 105 | L105D | TTG | GAT | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp6 | 105 | L105E | TTg | GAg | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | B.1.558 | 0.004566 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | B.1.565 | 0.00081 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | B.1.582 | 0.000491 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp6 | 105 | L105L | Ttg | Ctg | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp6 | 105 | L105del1 | ttG | tt- | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | B.1.630 | 0.005236 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 1 | 1 | B.1.634 | 0.003425 |
ORF1ab/nsp6 | 105 | L105del2 | tTG | t-- | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp6 | 105 | L105W | tTg | tGg | 1 | 1 | C.36.3 | 0.000567 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | N.4 | 0.004255 |
ORF1ab/nsp6 | 105 | L105M | Ttg | Atg | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp6 | 105 | L105W | tTg | tGg | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp6 | 105 | L105Y | tTG | tAT | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp6 | 105 | L105del2 | tTG | t-- | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | P.1.10 | 0.000269 |
ORF1ab/nsp6 | 105 | L105X | tTg | tAg | 1 | 1 | P.1.10 | 0.000269 |
ORF1ab/nsp6 | 105 | L105Y | tTG | tAT | 1 | 1 | P.1.10 | 0.000269 |
ORF1ab/nsp6 | 105 | L105F | ttG | ttT | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp6 | 105 | L105X | tTg | tAg | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp6 | 105 | L105Y | tTG | tAT | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp6 | 105 | L105X | tTg | tAg | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp6 | 105 | L105Y | tTG | tAT | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp6 | 105 | L105del2 | tTG | t-- | 1 | 1 | P.1.2 | 0.001156 |
ORF1ab/nsp6 | 105 | L105X | tTg | tAg | 1 | 1 | P.1.2 | 0.001156 |
ORF1ab/nsp6 | 105 | L105Y | tTG | tAT | 1 | 1 | P.1.2 | 0.001156 |
ORF1ab/nsp6 | 105 | L105X | tTg | tAg | 1 | 1 | P.1.4 | 0.000977 |
ORF1ab/nsp6 | 105 | L105Y | tTG | tAT | 1 | 1 | P.1.4 | 0.000977 |
ORF1ab/nsp6 | 105 | L105L | ttG | ttA | 1 | 1 | P.1.9 | 0.004808 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp6 | 105 | L105del | TTG | --- | 1 | 1 | Z.1 | 0.00289 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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